mRNA_H-canaliculatus_M_contigs74897.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR1_ECTSI) HSP 1 Score: 180 bits (457), Expect = 9.640e-53 Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 1
Query: 10 QVTAQRARLDFNRAAGGYNALLFQTPCSWGTVYFPEVWMHLHAALVNEEYDDIPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGYKQ 270
+VTAQRA LDFNRAA GYNALLFQTPCSWGTVYFPEVWMHLHAALVN++Y DIPGVLVNGWSGSWKKFLFSLMYH+DWYLLYPGYKQ
Sbjct: 308 EVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNDKYKDIPGVLVNGWSGSWKKFLFSLMYHNDWYLLYPGYKQ 394
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH5_9PHAE) HSP 1 Score: 180 bits (457), Expect = 9.000e-51 Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 1
Query: 10 QVTAQRARLDFNRAAGGYNALLFQTPCSWGTVYFPEVWMHLHAALVNEEYDDIPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGYKQ 270
+VTAQRA LDFNRAA GYNALLFQTPCSWGTVYFPEVWMHLHAALVN++Y DIPGVLVNGWSGSWKKFLFSLMYH+DWYLLYPGYKQ
Sbjct: 861 EVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNDKYKDIPGVLVNGWSGSWKKFLFSLMYHNDWYLLYPGYKQ 947
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C483_DIALT) HSP 1 Score: 74.7 bits (182), Expect = 1.260e-13 Identity = 36/95 (37.89%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 10 QVTAQRARLDFNRAAGGYNALLFQTPCSWGTVYFPEVWMHLHAALVNEEYDD------IPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGYKQVS 276
+V R R+D + GG Q PCSWG ++FPE W L++ IPG +V+GW GSWKK+L LMY ++LYP ++ S
Sbjct: 937 EVARPRRRIDLHAELGG-RPFFQQLPCSWGALFFPEAWRAFRDYLLHRMAQGPAVQVKIPGSVVDGWKGSWKKYLIELMYRRAQWMLYPNFRNQS 1030
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1G1V6_9GLOM) HSP 1 Score: 66.2 bits (160), Expect = 1.130e-10 Identity = 30/77 (38.96%), Postives = 39/77 (50.65%), Query Frame = 1
Query: 73 LFQTPCSWGTVYFPEVWMHLHAALVNEEYD---------DIPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGYKQVS 276
L+Q PCSWG VYFPE+W H D +P V N W SWK+FL L+Y + +LYP Y+ +
Sbjct: 209 LWQVPCSWGAVYFPEIWREFHDYFPARLQDWNGPKLQNITVPEVRSNRWKNSWKRFLIELVYLRGYVMLYPNYENFA 285
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: Uncharacterized (protein n=8 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9SNX5_RHIID) HSP 1 Score: 66.2 bits (160), Expect = 1.160e-10 Identity = 30/77 (38.96%), Postives = 39/77 (50.65%), Query Frame = 1
Query: 73 LFQTPCSWGTVYFPEVWMHLHAALVNEEYD---------DIPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGYKQVS 276
L+Q PCSWG VYFPE+W H D +P V N W SWK+FL L+Y + +LYP Y+ +
Sbjct: 386 LWQVPCSWGAVYFPEIWREFHDYFPARLQDWNGPKLQNITVPEVRSNRWKNSWKRFLIELVYLRGYVMLYPNYENFA 462
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397HJX1_9GLOM) HSP 1 Score: 65.9 bits (159), Expect = 1.590e-10 Identity = 31/73 (42.47%), Postives = 35/73 (47.95%), Query Frame = 1
Query: 73 LFQTPCSWGTVYFPEVWMHLHAALVNEEYD---------DIPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGY 264
L Q PCSWG VYFPE+W H D IPGV N W SWK+F L Y + +LYP Y
Sbjct: 388 LCQVPCSWGAVYFPEIWKEFHYYFPARLQDWRSLRLQNITIPGVRSNNWKNSWKRFFIELAYIRGYVMLYPNY 460
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: BQ2448_8107 (protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FTB2_9BASI) HSP 1 Score: 65.5 bits (158), Expect = 2.230e-10 Identity = 33/76 (43.42%), Postives = 41/76 (53.95%), Query Frame = 1
Query: 73 LFQTPCSWGTVYFPEVW--MHLHAALVNEEY------DDIPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGYKQVS 276
L Q PCSWG VYFPEVW HL+ AL E +P + N W SWKK++ L+Y + +LYP Y S
Sbjct: 779 LSQIPCSWGAVYFPEVWREFHLYLALRLSEMALPIADQIVPEIRSNKWPQSWKKYIIELVYLRGYVMLYPNYANYS 854
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: uncharacterized (protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI001904019A) HSP 1 Score: 65.1 bits (157), Expect = 3.020e-10 Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 1
Query: 73 LFQTPCSWGTVYFPEVWMHLHAALVN---EEYDDIPGVLV-----NGWSGSWKKFLFSLMYHHDWYLLYPGYKQVS 276
L Q PCSWG +YFPEVW H L++ E DI ++V N W+ SWKKF L++ + +LYP Y +
Sbjct: 765 LSQVPCSWGAIYFPEVWREFHEYLIDRLSERIFDIETLVVPDSRSNKWTKSWKKFFIELVFLRGYLMLYPNYPNFT 840
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397W2T0_9GLOM) HSP 1 Score: 63.2 bits (152), Expect = 1.390e-9 Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 1
Query: 73 LFQTPCSWGTVYFPEVWMHLHAAL---------VNEEYDDIPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGYKQVS 276
L Q PCSWG ++FPEVW H L N + +IP N W+ SWK+F L+Y + +LYP Y+ +
Sbjct: 377 LIQVPCSWGALFFPEVWREFHDYLRARLDDTTGPNLQQIEIPESRSNMWTSSWKRFFIELIYLRGYMMLYPNYEDFT 453
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T4H4_9GLOM) HSP 1 Score: 62.8 bits (151), Expect = 1.870e-9 Identity = 31/77 (40.26%), Postives = 36/77 (46.75%), Query Frame = 1
Query: 73 LFQTPCSWGTVYFPEVWMHLHAALVNEEYD---------DIPGVLVNGWSGSWKKFLFSLMYHHDWYLLYPGYKQVS 276
L+Q PCSWG VYFPEVW H D IP N W SWK+FL L Y + +LYP Y+
Sbjct: 209 LWQVPCSWGAVYFPEVWREFHDYFPARLQDWNGLKVQNITIPESRSNRWKRSWKRFLIELAYLRGYVMLYPNYENFK 285 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74897.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs74897.1.1 >prot_H-canaliculatus_M_contigs74897.1.1 ID=prot_H-canaliculatus_M_contigs74897.1.1|Name=mRNA_H-canaliculatus_M_contigs74897.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=93bp FRPQVTAQRARLDFNRAAGGYNALLFQTPCSWGTVYFPEVWMHLHAALVNback to top mRNA from alignment at H-canaliculatus_M_contigs74897:129..407+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs74897.1.1 ID=mRNA_H-canaliculatus_M_contigs74897.1.1|Name=mRNA_H-canaliculatus_M_contigs74897.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=279bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74897:129..407+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74897:129..407+ >mRNA_H-canaliculatus_M_contigs74897.1.1 ID=mRNA_H-canaliculatus_M_contigs74897.1.1|Name=mRNA_H-canaliculatus_M_contigs74897.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=279bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74897:129..407+ (Hapterophycus canaliculatus Oshoro7m male)back to top |