prot_H-canaliculatus_F_contig154.3989.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig154.3989.1
Unique Nameprot_H-canaliculatus_F_contig154.3989.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length528
Homology
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BLAST of mRNA_H-canaliculatus_F_contig154.3989.1 vs. uniprot
Match: D7FV86_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV86_ECTSI)

HSP 1 Score: 678 bits (1750), Expect = 3.650e-239
Identity = 369/527 (70.02%), Postives = 417/527 (79.13%), Query Frame = 0 
Query:    7 SGRGKESTSKNALSFLQRSDRSTSS--LPSPPTSPWPVGFVPPHGVE--RAGAWIAQAGNGPTPRLPRTSALAFLERAPMRTSGSSTCLVSGAGAEDGLGTLSGGVMAAGSNRGGFLPQPHEGDDSGSECSEEKEDSDICPSMLFSCFPCFYCFRSKQRRPAHFLDGRLDIGNSSKRDPQSVSSLSTPLLSDRPPSPEDFPKDVKLIEVEVESARNLPVGERVNMADLAGTYAILRMTPVQEGVGEQTTQTSVATRPINPSWGGRETFTFFVTHTTNSKAFLALQLLYRPLRPPXXXXXXXXX-SLRRGSSESSVASVPSGSRPGDVVIGEGFVDLLALFPAMNGKHTPGGLTGNSRRVAVPMREPEGKRRTRCSVMLGLRCRRVNETIDTHEDRLYEYERWTPLAGWNTAGKRRAGKWGTLDGSALSDTFADVAPPARDGAEVVLPWCPFGGWEYSREDMVPPVAGTIGRD----GQRDDAPAAPSSAAQEWENFAVAQKGAVWMEGYVQGYQAVRRRLWRRVTAA 524
            S RG+ S   NALSFL+RSDRST S  + +  T+PWPVGFVPP G +  R   W        TP LPRTSALAFLERAP R  G++  +V GAGAEDGLGTLSGG++AAG++RGGFLP+P+   D+GSECS+ +EDSDICPSML+SCFPCF   R  +RRPA  LDG L   NS KR+ ++  SLSTPLL+++PPSP +FP DVKLIEVEVESARNLP+GERVNMADLAGTYAILR+TPVQEGVGEQ  QTS+ATRP+NPSWGGRETFTFFVT    SKAFL+LQLLYRPLRPP           LRRG+SE+S+ASV SGSR GDV I EGFVDLL LF  ++G +TPG + GN+RRVAVPMREP+GKRRTRCSVMLGLRCRRVNETIDT EDRLYEYERWT +AGW+TAGK+RAGKW TLDGS LSD FADVAP   +  EVVLPWCPFGGWEYSR +  P  AG  G      G+RD+   APS  AQEWENFAVAQKGAVWMEGYVQG QAVRRRLWRRVTAA
Sbjct:   88 SSRGRSS---NALSFLERSDRSTDSPTVAAATTNPWPVGFVPPQGTKSNRTTGW----SQSYTPYLPRTSALAFLERAPGRARGNN--IVGGAGAEDGLGTLSGGMVAAGADRGGFLPRPY---DTGSECSDAEEDSDICPSMLYSCFPCFNWSRRGKRRPADLLDGGL--ANSVKRESRAQLSLSTPLLTEQPPSPTNFPTDVKLIEVEVESARNLPLGERVNMADLAGTYAILRITPVQEGVGEQVNQTSLATRPVNPSWGGRETFTFFVTDVAGSKAFLSLQLLYRPLRPPPAPQPLQPPLPLRRGASEASLASVSSGSRHGDVTIAEGFVDLLGLFSLVDGTYTPGTMKGNARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDRLYEYERWTRVAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGWEYSRGEETPASAGNTGTSEAGGGRRDEF--APSLGAQEWENFAVAQKGAVWMEGYVQGDQAVRRRLWRRVTAA 598
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig154.3989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV86_ECTSI3.650e-23970.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 198..291
e-value: 2.0E-5
score: 26.3
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 205..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig154contigH-canaliculatus_F_contig154:247..10560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig154.3989.1mRNA_H-canaliculatus_F_contig154.3989.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig154 2..10683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig154.3989.1 ID=prot_H-canaliculatus_F_contig154.3989.1|Name=mRNA_H-canaliculatus_F_contig154.3989.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=528bp
MSTTSSSGRGKESTSKNALSFLQRSDRSTSSLPSPPTSPWPVGFVPPHGV
ERAGAWIAQAGNGPTPRLPRTSALAFLERAPMRTSGSSTCLVSGAGAEDG
LGTLSGGVMAAGSNRGGFLPQPHEGDDSGSECSEEKEDSDICPSMLFSCF
PCFYCFRSKQRRPAHFLDGRLDIGNSSKRDPQSVSSLSTPLLSDRPPSPE
DFPKDVKLIEVEVESARNLPVGERVNMADLAGTYAILRMTPVQEGVGEQT
TQTSVATRPINPSWGGRETFTFFVTHTTNSKAFLALQLLYRPLRPPPAPP
PPLPPSLRRGSSESSVASVPSGSRPGDVVIGEGFVDLLALFPAMNGKHTP
GGLTGNSRRVAVPMREPEGKRRTRCSVMLGLRCRRVNETIDTHEDRLYEY
ERWTPLAGWNTAGKRRAGKWGTLDGSALSDTFADVAPPARDGAEVVLPWC
PFGGWEYSREDMVPPVAGTIGRDGQRDDAPAAPSSAAQEWENFAVAQKGA
VWMEGYVQGYQAVRRRLWRRVTAANLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf