prot_H-canaliculatus_F_contig15323.3949.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15323.3949.1
Unique Nameprot_H-canaliculatus_F_contig15323.3949.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length55
Homology
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: D8LTA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA1_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 6.830e-23
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLEAG 55
            KNVVERGPWM+ M+ ALRRAT+GDYGGALVLYSRLAE+G EVAQSNAAWLLEAG
Sbjct:  256 KNVVERGPWMDGMQAALRRATAGDYGGALVLYSRLAEVGFEVAQSNAAWLLEAG 309          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: A0A6H5JP59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP59_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 7.680e-23
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLEAG 55
            KNVVERGPWM+ M+ ALRRAT+GDYGGALVLYSRLAEIG EVAQSNAAWLLEAG
Sbjct:  433 KNVVERGPWMDGMQAALRRATAGDYGGALVLYSRLAEIGFEVAQSNAAWLLEAG 486          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: UPI0018910303 (ERAD-associated E3 ubiquitin-protein ligase component HRD3-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI0018910303)

HSP 1 Score: 65.1 bits (157), Expect = 3.210e-11
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLE 53
            K+V ERGPW    R AL     GD G AL+LYSR+A++G EVAQSNAAW+L+
Sbjct:   44 KSVAERGPWSSMSRWALESYLKGDIGKALLLYSRMADLGYEVAQSNAAWILD 95          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: UPI000C871CA4 (ERAD-associated E3 ubiquitin-protein ligase component HRD3 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C871CA4)

HSP 1 Score: 65.5 bits (158), Expect = 4.660e-11
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLE 53
            K V ERGPW    R AL     GD G AL+LYSR+AE+G EVAQSNAAW+L+
Sbjct:  420 KTVAERGPWSSLSRWALEAYLKGDVGKALLLYSRMAELGYEVAQSNAAWILD 471          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: A0A453IGK5_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453IGK5_AEGTS)

HSP 1 Score: 65.1 bits (157), Expect = 6.290e-11
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLE 53
            K+V ERGPW    R AL     GD G AL+LYSR+A++G EVAQSNAAW+L+
Sbjct:  337 KSVAERGPWSSMSRWALESYLKGDIGKALLLYSRMADLGYEVAQSNAAWILD 388          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: A0A8K0HYL3_COCNU (ERAD-associated E3 ubiquitin-protein ligase component HRD3 n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0HYL3_COCNU)

HSP 1 Score: 65.1 bits (157), Expect = 6.370e-11
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLE 53
            K V ERGPW    R AL     GD G AL+LYSR+AE+G EVAQSNAAW+L+
Sbjct:  449 KTVAERGPWSALSRWALESYLKGDVGKALLLYSRMAELGYEVAQSNAAWILD 500          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: A0A3B6IV61_WHEAT (Uncharacterized protein n=13 Tax=Pooideae TaxID=147368 RepID=A0A3B6IV61_WHEAT)

HSP 1 Score: 65.1 bits (157), Expect = 6.370e-11
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLE 53
            K+V ERGPW    R AL     GD G AL+LYSR+A++G EVAQSNAAW+L+
Sbjct:  429 KSVAERGPWSSMSRWALESYLKGDIGKALLLYSRMADLGYEVAQSNAAWILD 480          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: J3LM65_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LM65_ORYBR)

HSP 1 Score: 64.7 bits (156), Expect = 8.670e-11
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLE 53
            K+V ERGPW    R AL     GD G AL+LYSR+A++G EVAQSNAAW+L+
Sbjct:  269 KSVAERGPWSSLSRWALESYLKGDIGKALLLYSRMADLGYEVAQSNAAWILD 320          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: A0A5P1FM77_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FM77_ASPOF)

HSP 1 Score: 64.7 bits (156), Expect = 8.680e-11
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 MKNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLLE 53
            +K V ERGPW   +R AL      D G AL+LYSR+AE+G EVAQSNAAW+L+
Sbjct:  279 LKTVAERGPWSSLLRWALESYLKDDVGKALLLYSRMAELGYEVAQSNAAWILD 331          
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Match: UPI0005395F34 (ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI0005395F34)

HSP 1 Score: 64.7 bits (156), Expect = 8.700e-11
Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    2 KNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAWLL 52
            K+V ERGPW    R AL     GD G A +LYSR+AE+G EVAQSNAAW+L
Sbjct:  421 KSVAERGPWSSLSRWALESYVKGDLGKAFILYSRMAELGYEVAQSNAAWIL 471          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15323.3949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTA1_ECTSI6.830e-2387.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP59_9PHAE7.680e-2388.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00189103033.210e-1159.62ERAD-associated E3 ubiquitin-protein ligase compon... [more]
UPI000C871CA44.660e-1161.54ERAD-associated E3 ubiquitin-protein ligase compon... [more]
A0A453IGK5_AEGTS6.290e-1159.62Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A8K0HYL3_COCNU6.370e-1161.54ERAD-associated E3 ubiquitin-protein ligase compon... [more]
A0A3B6IV61_WHEAT6.370e-1159.62Uncharacterized protein n=13 Tax=Pooideae TaxID=14... [more]
J3LM65_ORYBR8.670e-1159.62Uncharacterized protein n=1 Tax=Oryza brachyantha ... [more]
A0A5P1FM77_ASPOF8.680e-1158.49Uncharacterized protein n=1 Tax=Asparagus officina... [more]
UPI0005395F348.700e-1160.78ERAD-associated E3 ubiquitin-protein ligase compon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45084FAMILY NOT NAMEDcoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15323contigH-canaliculatus_F_contig15323:730..1383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15323.3949.1mRNA_H-canaliculatus_F_contig15323.3949.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15323 730..1398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15323.3949.1 ID=prot_H-canaliculatus_F_contig15323.3949.1|Name=mRNA_H-canaliculatus_F_contig15323.3949.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=55bp
MKNVVERGPWMENMRGALRRATSGDYGGALVLYSRLAEIGIEVAQSNAAW
LLEAG
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