prot_H-canaliculatus_F_contig15248.3906.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15248.3906.1
Unique Nameprot_H-canaliculatus_F_contig15248.3906.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length48
Homology
BLAST of mRNA_H-canaliculatus_F_contig15248.3906.1 vs. uniprot
Match: A0A6H5JNV5_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV5_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.080e-13
Identity = 32/42 (76.19%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    7 HRSPRRQGGQVPDLVGKAIVQVTCGAYHTVSLDAEGRVYPFG 48
            HR    QGGQVPDL GK I+QV CG+YHTVSLD EGRVYPFG
Sbjct:   82 HRESTWQGGQVPDLAGKRIIQVACGSYHTVSLDDEGRVYPFG 123          
BLAST of mRNA_H-canaliculatus_F_contig15248.3906.1 vs. uniprot
Match: D7G3F9_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F9_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.510e-12
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    7 HRSPRRQGGQVPDLVGKAIVQVTCGAYHTVSLDAEGRVYPFG 48
            HR    QGGQVPDL G  I+QV CG+YHT+SLD EGRVYPFG
Sbjct:  300 HRESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFG 341          
BLAST of mRNA_H-canaliculatus_F_contig15248.3906.1 vs. uniprot
Match: A0A7S3XQJ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQJ6_HETAK)

HSP 1 Score: 51.2 bits (121), Expect = 3.650e-6
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    7 HRSPRRQGGQVPDLVGKAIVQVTCGAYHTVSLDAEGRVYPFG 48
            HR    +   V  +  +A+VQV CG YHTV+L AEGRV+PFG
Sbjct:  366 HRENAHRPALVQGIADQAVVQVACGCYHTVTLTAEGRVFPFG 407          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15248.3906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNV5_9PHAE1.080e-1376.19BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3F9_ECTSI1.510e-1271.43BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3XQJ6_HETAK3.650e-652.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 6..48
e-value: 1.9E-6
score: 28.9
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 17..48
NoneNo IPR availablePFAMPF13540RCC1_2coord: 25..45
e-value: 7.4E-6
score: 25.6
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 28..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15248contigH-canaliculatus_F_contig15248:313..456 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15248.3906.1mRNA_H-canaliculatus_F_contig15248.3906.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15248 313..456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15248.3906.1 ID=prot_H-canaliculatus_F_contig15248.3906.1|Name=mRNA_H-canaliculatus_F_contig15248.3906.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=48bp
LAWPLLHRSPRRQGGQVPDLVGKAIVQVTCGAYHTVSLDAEGRVYPFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II