prot_H-canaliculatus_F_contig15205.3882.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15205.3882.1
Unique Nameprot_H-canaliculatus_F_contig15205.3882.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length263
Homology
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BLAST of mRNA_H-canaliculatus_F_contig15205.3882.1 vs. uniprot
Match: A0A6H5JYB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB8_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.140e-71
Identity = 176/263 (66.92%), Postives = 196/263 (74.52%), Query Frame = 0 
Query:    1 QALVEISTSGANPSAAAATSLIPTRGPRRAAVVACSAGLVRDLIASCVALRAENAHASERLSAALASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSEGGRNPAEEGGDHGQLERRKRLDDGATHGASEVGAKVFGQLLSLSVFGFLGPQSLEESRKVSREWRDKCAWDCSWSNLCASRWRLGPEQRHAEVWRAPDRRSNRNDGXXXXXXXXXXXXXXXPLPPSWRSIYGRLHRELRGPMGAFSPSHMVIGKSIQE 263
            +ALVEISTSGAN SA+AATSLIPTRGPRRAAVVACSAGLVRDLI++C+ALR + A    RL+ AL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     G +  + GG  G +         AT G +   AKVFGQLLSLSVFGFLGPQSLEE+ KVSR+WRDKC WDC+WS LC SRWRLGPEQRHAEVWR PD        XXXX             PP+W+SIYGRLHR++  P G F PSHMVIG+S+QE
Sbjct:   74 EALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLLARLAEALRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSHGRDSGGASGAV---------ATAGVASS-AKVFGQLLSLSVFGFLGPQSLEEASKVSRDWRDKCTWDCNWSTLCVSRWRLGPEQRHAEVWRVPDDADGTGKXXXXXKGVARSVLSPPAPPPTWQSIYGRLHRDVHAPSGTFCPSHMVIGRSVQE 326
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BLAST of mRNA_H-canaliculatus_F_contig15205.3882.1 vs. uniprot
Match: D8LR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR75_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.130e-68
Identity = 175/269 (65.06%), Postives = 191/269 (71.00%), Query Frame = 0 
Query:    1 QALVEISTSGANPSAAAATSLIPTRGPRRAAVVACSAGLVRDLIASCVALRAENAHASERLSAALASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSEGGRNPAEEGGDHGQLERRKRLDDGATHGASEV------GAKVFGQLLSLSVFGFLGPQSLEESRKVSREWRDKCAWDCSWSNLCASRWRLGPEQRHAEVWRAPDRRSNRNDGXXXXXXXXXXXXXXXPLPPSWRSIYGRLHRELRGPMGAFSPSHMVIGKSIQE 263
            +ALVEISTSGAN SA+AATSLIPTRGPRRAAVVACSAGLVRDLI++C+ALR + A  S R + AL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               HG       LD G   G +E        AKVFGQLLSLSVFGFLGPQSLEE+ KVSREWRDKC WDC+WS LC SRWRLGPEQRHAEVWR PD      DG   XXX           PP+W+SIYGRLH ++  P G F PSHMVIG+S+QE
Sbjct:  219 EALVEISTSGANLSASAATSLIPTRGPRRAAVVACSAGLVRDLISTCIALRKDKASLSARFAEALRQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---------HG-------LDSGGAGGGAEAVVGVASSAKVFGQLLSLSVFGFLGPQSLEEASKVSREWRDKCTWDCNWSTLCVSRWRLGPEQRHAEVWRVPDDA----DGKGKXXXVARSAVSPPAPPPTWQSIYGRLHGDVHAPSGTFCPSHMVIGRSVQE 467
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BLAST of mRNA_H-canaliculatus_F_contig15205.3882.1 vs. uniprot
Match: A0A835YLV5_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.200e-14
Identity = 49/142 (34.51%), Postives = 64/142 (45.07%), Query Frame = 0 
Query:  134 ASEVGAKVFGQLLSLSVFGFLGPQSLEESRKVSREWRDKCAWDCSWSNLCASRWRLGPEQRHAEVWRA-----------------PDRRSNR----NDGXXXXXXXXXXXXXXXPLPP-SWRSIYGRLHRELRGPMGAFSPS 253
            A    A VFG   +L +  FL   SLE +R+  R+WR +CAWDC+W+  CA+RWRL  + R  E W+A                 P+ R+       +                  PP SWR +Y  LHRELR P GA   S
Sbjct:  285 ADSAAAAVFGASCALPIHAFLDAASLEAARRACRDWRARCAWDCTWARQCAARWRLRGQDRALEAWQARFSRVSNAQRLRRRDCAPETRAGALLRAGERCHAQLEQYYRDPEALAAPPVSWREVYCALHRELRLPDGALCVS 426
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15205.3882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JYB8_9PHAE1.140e-7166.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR75_ECTSI1.130e-6865.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YLV5_9STRA9.200e-1434.51BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..97
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 73..98
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 147..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15205contigH-canaliculatus_F_contig15205:753..1837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15205.3882.1mRNA_H-canaliculatus_F_contig15205.3882.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15205 753..1837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15205.3882.1 ID=prot_H-canaliculatus_F_contig15205.3882.1|Name=mRNA_H-canaliculatus_F_contig15205.3882.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=263bp
QALVEISTSGANPSAAAATSLIPTRGPRRAAVVACSAGLVRDLIASCVAL
RAENAHASERLSAALASAAAAAQQQQQQQQQQQQQQQQQRRQRQQEAGAS
SPSSEGGRNPAEEGGDHGQLERRKRLDDGATHGASEVGAKVFGQLLSLSV
FGFLGPQSLEESRKVSREWRDKCAWDCSWSNLCASRWRLGPEQRHAEVWR
APDRRSNRNDGGSAAAAAGRSVVSPPPLPPSWRSIYGRLHRELRGPMGAF
SPSHMVIGKSIQE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf