prot_H-canaliculatus_F_contig1518.3870.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1518.3870.1
Unique Nameprot_H-canaliculatus_F_contig1518.3870.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length162
Homology
BLAST of mRNA_H-canaliculatus_F_contig1518.3870.1 vs. uniprot
Match: A0A6H5JL38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL38_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 8.900e-90
Identity = 125/157 (79.62%), Postives = 141/157 (89.81%), Query Frame = 0
Query:    1 MLIDGVFTPHWYNLLEYINDEMTLAMAVVKAMAASVLYSPFANGLFLAGAWVLSYGLKAGFGWREWKRQLAVCTVRDFEMWPPLHILNFWLVPKHWRPLAGHLAGVVLLAVISSTGLTDAELPLGQRAVPLLMRWARAIGERLTRKGRKASGAPPAQ 157
            M+IDG+FTPHWYNL++Y+NDEMTL +A  KA+A+SV YSPFANGLFLAGA VL YG K  FGW  W+RQL VCT+RDFEMWPPLH+LNFWLVPKHWRPLAGHLAGVVLLAVIS TGLTDA LPLGQRAVPL+MRWARA+G RL+ KGR+ASGAPPA+
Sbjct:  275 MIIDGIFTPHWYNLVDYVNDEMTLGLAFAKAVASSVFYSPFANGLFLAGARVLRYGFKTRFGWAVWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPLGQRAVPLMMRWARAVGGRLSGKGRRASGAPPAK 431          
BLAST of mRNA_H-canaliculatus_F_contig1518.3870.1 vs. uniprot
Match: D8LNF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF3_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 3.170e-78
Identity = 111/136 (81.62%), Postives = 122/136 (89.71%), Query Frame = 0
Query:   22 MTLAMAVVKAMAASVLYSPFANGLFLAGAWVLSYGLKAGFGWREWKRQLAVCTVRDFEMWPPLHILNFWLVPKHWRPLAGHLAGVVLLAVISSTGLTDAELPLGQRAVPLLMRWARAIGERLTRKGRKASGAPPAQ 157
            MTL +A VKA+A+SV YSPFANGLFLAGA VL YG K  FGW EW+RQL VCT+RDFEMWPPLH+LNFWLVPKHWRPLAGHLAGVVLLAVIS TGLTDA LPLGQRAVPL+MRWARA+G RL+ KGR+ASGAPPA+
Sbjct:    1 MTLGLAFVKAVASSVFYSPFANGLFLAGARVLRYGFKTRFGWAEWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPLGQRAVPLMMRWARAVGGRLSGKGRRASGAPPAK 136          
BLAST of mRNA_H-canaliculatus_F_contig1518.3870.1 vs. uniprot
Match: A0A7S2UZM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZM4_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.750e-29
Identity = 55/126 (43.65%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    1 MLIDGVFTPHWYNLLEYINDEMTLAMAVVKAMAASVLYSPFANGLFLAGAWVLSYGLKAG--FGWREWKRQLAVCTVRDFEMWPPLHILNFWLVPKHWRPLAGHLAGVVLLAVIS-STGLTDAELP 123
            MLIDG+ TPH+YN LE I+++ T+ + ++K    + ++ P ANG+FLAG  +L +GL     F +  WK QL V T+RD ++WP L +LNF L+PKHWRPLA  LA + ++  +  +TG +    P
Sbjct:  196 MLIDGLATPHYYNALELISEKRTMPVVLLKTFIGTAIFGPVANGVFLAGVPLLQHGLDIVKMFNFASWKHQLLVATIRDLQIWPLLDMLNFKLLPKHWRPLASSLAALGVITFLGFATGFSQTTTP 321          
BLAST of mRNA_H-canaliculatus_F_contig1518.3870.1 vs. uniprot
Match: A0A835YIQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIQ1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.840e-26
Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    1 MLIDGVFTPHWYNLLEYINDEMTLAMAVVKAMAASVLYSPFANGLFLAGAWVLSYG---LKAGFGWREWKRQLAVCTVRDFEMWPPLHILNFWLVPKHWRPLAGHLAGVVLLAVISSTGLTDAELPL 124
            M IDGV TP WY +LE  +    L + V K +A+S++Y PFANG+FLAG  VL YG   L  GF W  W+RQL + T+RD ++  P    N  LVP  ++PL    + +    V+S     + ELP+
Sbjct:   18 MAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELPM 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1518.3870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JL38_9PHAE8.900e-9079.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF3_ECTSI3.170e-7881.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UZM4_9STRA1.750e-2943.65Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YIQ1_9STRA3.840e-2641.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 63..107
e-value: 2.0E-6
score: 27.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..161
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1518contigH-canaliculatus_F_contig1518:23749..25967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1518.3870.1mRNA_H-canaliculatus_F_contig1518.3870.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1518 22267..26081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1518.3870.1 ID=prot_H-canaliculatus_F_contig1518.3870.1|Name=mRNA_H-canaliculatus_F_contig1518.3870.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=162bp
MLIDGVFTPHWYNLLEYINDEMTLAMAVVKAMAASVLYSPFANGLFLAGA
WVLSYGLKAGFGWREWKRQLAVCTVRDFEMWPPLHILNFWLVPKHWRPLA
GHLAGVVLLAVISSTGLTDAELPLGQRAVPLLMRWARAIGERLTRKGRKA
SGAPPAQRGRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22