prot_H-canaliculatus_F_contig14931.3715.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14931.3715.1
Unique Nameprot_H-canaliculatus_F_contig14931.3715.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length111
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14931.3715.1 vs. uniprot
Match: D8LSG0_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG0_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 3.830e-36
Identity = 74/107 (69.16%), Postives = 90/107 (84.11%), Query Frame = 0 
Query:    6 PSWLGALVGLEMAEFAGTRAARAAVLMREVRDMEAKELSVLRRLHKVEPEVSLQDYSAFRGVSLRSAV-AYTDLETLQQQYLQRQPEAHEQELADLAINGSFISNLL 111
            P+WLG LVGL M EFAGT AARA+V++RE RDMEAKEL+VL+RL K++PEV+L DY+AFRG  LRS+  AY  LE LQ QYL+R PE H+QELADLA+NGSF+S+LL
Sbjct:  446 PAWLGVLVGLGMPEFAGTGAARASVVVREARDMEAKELAVLQRLQKLKPEVTLDDYTAFRGAGLRSSSPAYASLEALQGQYLRRPPEDHQQELADLAMNGSFVSDLL 552
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14931.3715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSG0_ECTSI3.830e-3669.16PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14931contigH-canaliculatus_F_contig14931:130..883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14931.3715.1mRNA_H-canaliculatus_F_contig14931.3715.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14931 130..883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14931.3715.1 ID=prot_H-canaliculatus_F_contig14931.3715.1|Name=mRNA_H-canaliculatus_F_contig14931.3715.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=111bp
APPSPPSWLGALVGLEMAEFAGTRAARAAVLMREVRDMEAKELSVLRRLH
KVEPEVSLQDYSAFRGVSLRSAVAYTDLETLQQQYLQRQPEAHEQELADL
AINGSFISNLL
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