prot_H-canaliculatus_F_contig14909.3707.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14909.3707.1
Unique Nameprot_H-canaliculatus_F_contig14909.3707.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length267
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14909.3707.1 vs. uniprot
Match: A0A6H5JEB8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB8_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.360e-25
Identity = 146/203 (71.92%), Postives = 155/203 (76.35%), Query Frame = 0 
Query:   70 PVESGIRRLLLTGNPRLGDAGARALAAALKKDRSLEVLDLTRCKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLHAGSSALESLELQGNHVGDDGAVALANGLAGHGAWGGKRGGRRDVRRAR-----REGXXXXXXXXXXXXXXXXXXXXXXXXXXSGGGGRXXXXXXXXXXXXGEIVLEELELAGNPVSL 267
            P  SGIRRLLLTGN R+GDAGA+ALA+ALKKD SL+VLDLTRCK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLHAGSSALE LELQGNHVGD GAVALA+GL G    G KRGGR     A+     R G      XXXXXXXXXXXXXXXXXXXX   GG X           G +VLEELELAGN ++L
Sbjct:  298 PAASGIRRLLLTGNDRIGDAGAKALASALKKDSSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLHAGSSALECLELQGNHVGDAGAVALADGLVG----GSKRGGRXXXXXAKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXKGGXX-----------GGVVLEELELAGNALTL 485
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BLAST of mRNA_H-canaliculatus_F_contig14909.3707.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.840e-24
Identity = 108/128 (84.38%), Postives = 112/128 (87.50%), Query Frame = 0 
Query:   70 PVESGIRRLLLTGNPRLGDAGARALAAALKKDRSLEVLDLTRCKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLHAGSSALESLELQGNHVGDDGAVALANGLAGHGAWGGKRGGRR 197
            PV SGIRRLLLTGN RLGDAGA+ALA+ALKKD SL+VLDLTRCK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   HAGSSALE LELQGNHVGD GAVALA+GL G    G  RGGRR
Sbjct:  247 PVASGIRRLLLTGNDRLGDAGAKALASALKKDNSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVG----GNNRGGRR 370
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14909.3707.1 vs. uniprot
Match: A0A835Z931_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z931_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 8.800e-8
Identity = 79/113 (69.91%), Postives = 91/113 (80.53%), Query Frame = 0 
Query:   72 ESGIRRLLLTGNPRLGDAGARALAAALKKDRSLEVLDLTRCKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLHAGSSALESLELQGNHVGDDGAVALANGLA 184
            + GIR L L GNP LGDAGA+ALAAALK++ +LE LDLTRC  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  L  G+S+++ L+L  NH+ D GA A A  L+
Sbjct:  201 DRGIRHLSLAGNP-LGDAGAKALAAALKQNVALEELDLTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDGASSIQRLDLDHNHIADGGAFAFARALS 312
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14909.3707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JEB8_9PHAE1.360e-2571.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LLY3_ECTSI1.840e-2484.38Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835Z931_9STRA8.800e-869.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 101..128
e-value: 2.3E-4
score: 30.5
coord: 158..185
e-value: 3.7E-4
score: 29.8
coord: 207..234
e-value: 7.5E-4
score: 28.8
coord: 129..156
e-value: 6.7E-5
score: 32.3
coord: 72..100
e-value: 1.7
score: 15.5
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 33..233
coord: 161..264
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 75..234
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 76..95
e-value: 1.3
score: 9.2
coord: 101..123
e-value: 2.7E-5
score: 23.8
coord: 128..151
e-value: 2.5E-5
score: 24.0
coord: 210..229
e-value: 0.031
score: 14.3
coord: 161..180
e-value: 4.9E-4
score: 19.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 157..266
e-value: 3.9E-11
score: 44.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 72..156
e-value: 1.1E-23
score: 85.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14909contigH-canaliculatus_F_contig14909:443..2458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14909.3707.1mRNA_H-canaliculatus_F_contig14909.3707.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14909 443..2458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14909.3707.1 ID=prot_H-canaliculatus_F_contig14909.3707.1|Name=mRNA_H-canaliculatus_F_contig14909.3707.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=267bp
YLSSALAKAATAALTASETSAKTPRSGKLDGGSGNKADSKLFDGSEASAT
ATAGQGETGDDAGSTPPPPPVESGIRRLLLTGNPRLGDAGARALAAALKK
DRSLEVLDLTRCKIGDDGVRCLAEALRSNSCLRELRLGYNDISADGASAL
ASLLHAGSSALESLELQGNHVGDDGAVALANGLAGHGAWGGKRGGRRDVR
RARREGSGGLRSLNLAGNGIGCAGGVALAEALSGGGGRGRGGRGRGGGGG
GEIVLEELELAGNPVSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt