prot_H-canaliculatus_F_contig14572.3527.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14572.3527.1
Unique Nameprot_H-canaliculatus_F_contig14572.3527.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length55
Homology
BLAST of mRNA_H-canaliculatus_F_contig14572.3527.1 vs. uniprot
Match: D8LPZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPZ2_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.130e-23
Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 LLRAVRNKYLWLTISLMVYTFGISGGVYDIIRNPAPFMLKQDGSIMWFHPQ 51
            LLR +RNKYLWL  SL+VYTFGISGGVYDIIRNPAPFM+KQDG IMWFHPQ
Sbjct:  237 LLRVIRNKYLWLATSLLVYTFGISGGVYDIIRNPAPFMVKQDGFIMWFHPQ 287          
BLAST of mRNA_H-canaliculatus_F_contig14572.3527.1 vs. uniprot
Match: A0A7S2UY50_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY50_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.920e-11
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 LLRAVRNKYLWLTISLMVYTFGISGGVYDIIRNPAPFMLK-QDGSIMWFHPQV 52
            ++  +RNK LWL +SL +YT  ISG +YDIIRNPAPF +  Q G I++FHPQ 
Sbjct:  218 IINLLRNKMLWLLVSLGMYTCSISGMIYDIIRNPAPFFMNHQTGQIVFFHPQA 270          
BLAST of mRNA_H-canaliculatus_F_contig14572.3527.1 vs. uniprot
Match: A0A836CB15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB15_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 6.800e-9
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    2 LRAVRNKYLWLTISLMVYTFGISGGVYDIIRNPAPFMLK-QDGSIMWFHPQ 51
            LR VR+  LWL +SL+VYTF ISG ++DIIR+P PF++  Q    ++F PQ
Sbjct:  102 LRVVRSPTLWLVVSLLVYTFSISGAIFDIIRSPPPFVISAQTRKPVYFSPQ 152          
BLAST of mRNA_H-canaliculatus_F_contig14572.3527.1 vs. uniprot
Match: A0A024G8I4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8I4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.700e-8
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 LLRAVRNKYLWLTISLMVYTFGISGGVYDIIRNPAPFMLKQDGSIMWFHPQVR 53
            +L  +R K LW+T+SL+ Y   +SG VY IIRNPAP+ + Q G I +FHP  R
Sbjct:  231 ILSRIRRKALWMTVSLLFYGLSVSGMVYCIIRNPAPYHMTQKG-IQYFHPDGR 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14572.3527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LPZ2_ECTSI1.130e-2386.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UY50_9STRA2.920e-1156.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CB15_9STRA6.800e-952.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A024G8I4_9STRA1.700e-850.94Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021149Oligosaccharyl transferase complex, subunit OST3/OST6PFAMPF04756OST3_OST6coord: 3..51
e-value: 1.6E-10
score: 40.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 9..31
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14572contigH-canaliculatus_F_contig14572:229..393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14572.3527.1mRNA_H-canaliculatus_F_contig14572.3527.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14572 229..393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14572.3527.1 ID=prot_H-canaliculatus_F_contig14572.3527.1|Name=mRNA_H-canaliculatus_F_contig14572.3527.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=55bp
LLRAVRNKYLWLTISLMVYTFGISGGVYDIIRNPAPFMLKQDGSIMWFHP
QVRRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021149OligosaccharylTrfase_OST3/OST6