prot_H-canaliculatus_F_contig13806.3029.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13806.3029.1
Unique Nameprot_H-canaliculatus_F_contig13806.3029.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length305
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13806.3029.1 vs. uniprot
Match: D8LRE4_ECTSI (Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE4_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 4.960e-17
Identity = 89/154 (57.79%), Postives = 97/154 (62.99%), Query Frame = 0 
Query:    1 LKKTAAAHELKLRSLRQEHEKIKSGLQRQLEMRPGATPGAHAAVVXXXXXXXXXXXXXXXXXXXXXXXXXELEEGEGRERQDPAG----------------------RIAELEKELSHVRSFYTRKLKEVERRAENQMRALKRG---IGGGGSR 129
            L ++ AA ELKLR+LRQEHE++K+GLQRQLE R G   GA AA  XXXXXXXXXXXXXXXXX              GR  Q   G                      R+AELEKEL+HVRSFYTRKLKEVERRAENQMRALKRG    G GGSR
Sbjct:   92 LARSTAASELKLRALRQEHERVKNGLQRQLETRVG---GAAAAAXXXXXXXXXXXXXXXXXXVCGRPGVATGGGSGGRSPQGRQGEGXXXXXXXXXXXXXXXXXXXDRVAELEKELTHVRSFYTRKLKEVERRAENQMRALKRGSPGTGAGGSR 242
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BLAST of mRNA_H-canaliculatus_F_contig13806.3029.1 vs. uniprot
Match: A0A6H5KNC7_9PHAE (Centrosomal protein of 162 kDa (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC7_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.290e-15
Identity = 101/180 (56.11%), Postives = 111/180 (61.67%), Query Frame = 0 
Query:    1 LKKTAAAHELKLRSLRQEHEKIKSGLQRQLEMRPGATPGAHAAVVXXXXXXXXXXXXXXXXXXXXXXXXXELEEGEGRE-----------------RQDPAGRIAELEKELSHVRSFYTRKLKEVERRAENQMRALKRGIGG---GGSRPATADPAYKRIGGG-------SVVTRRGIDG 153
            L ++ AA ELKLR+LRQEHE++K+GLQRQLE R G   GA     XXXXXXXXXXXXXXXXXXXXXXXXX     +GR+                       R+AELEKEL+HVRSFYTRKLKEVERRAENQMRALKRG  G   GG       PA     GG       S    RGIDG
Sbjct:  170 LARSTAASELKLRALRQEHERVKNGLQRQLETRVG---GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRISQGRQGXXXXXXXXXXXXXXXXXXXXXDRVAELEKELTHVRSFYTRKLKEVERRAENQMRALKRGSPGTRAGGVSALGIAPAAATAAGGEPDADGSSSRGARGIDG 346
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13806.3029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRE4_ECTSI4.960e-1757.79Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus ... [more]
A0A6H5KNC7_9PHAE1.290e-1556.11Centrosomal protein of 162 kDa (Fragment) n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13806contigH-canaliculatus_F_contig13806:3..1477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13806.3029.1mRNA_H-canaliculatus_F_contig13806.3029.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13806 3..1479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13806.3029.1 ID=prot_H-canaliculatus_F_contig13806.3029.1|Name=mRNA_H-canaliculatus_F_contig13806.3029.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=305bp
LKKTAAAHELKLRSLRQEHEKIKSGLQRQLEMRPGATPGAHAAVVVGGGG
GGGGGGHSPQQQQERQEQQQELEEGEGRERQDPAGRIAELEKELSHVRSF
YTRKLKEVERRAENQMRALKRGIGGGGSRPATADPAYKRIGGGSVVTRRG
IDGGGEEKEDGWGGIAGPWQAPRSTPANGAAAAGAMHVGQRGGEPHSNAR
GEFADSRARSPGRLAGDGGEDGPGRGRDRGEIQEGRREQRQGVSRRPGDF
APPRGTGTSSVAEEEEERWAEKDRGRWRRRPLPEDSSRARGGGARGGGDR
DGVSS
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