prot_H-canaliculatus_F_contig13651.2938.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13651.2938.1
Unique Nameprot_H-canaliculatus_F_contig13651.2938.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length74
Homology
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: D8LCK6_ECTSI (Protein transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 2.410e-35
Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0
Query:    5 WDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCNGCGAILNPYAQV 74
            WDV  AEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMK+R D   P++YDP+RCNGCGAILNPYAQV
Sbjct:    4 WDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQV 73          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: A0A7S2Y1K9_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.670e-33
Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    1 MDGRWDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCNGCGAILNPYAQV 74
            M+G WD  AAEERD  RFSWNVWPSSRLEATRIVVPVGCLYTP+K   +   P++YDP+RCNGCGAILNPY Q+
Sbjct:    1 MEG-WDWGAAEERDGARFSWNVWPSSRLEATRIVVPVGCLYTPLKRLENMPPPLAYDPIRCNGCGAILNPYCQI 73          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: A0A7S4D7Q8_HETAK (Protein transport protein SEC23 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7Q8_HETAK)

HSP 1 Score: 116 bits (290), Expect = 6.230e-31
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    1 MDGRWDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCNGCGAILNPYAQV 74
            M+G WDV AAEERD  RFSWNVWPSS+LEATRIVVP+GCLYTP+K        ++YDP+RCNGCG ILNP+ Q+
Sbjct:    1 MEG-WDVHAAEERDGARFSWNVWPSSKLEATRIVVPLGCLYTPLKKIEGMPPALAYDPIRCNGCGGILNPFCQI 73          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: A0A482RVW2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVW2_9ARCH)

HSP 1 Score: 105 bits (262), Expect = 2.330e-28
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    4 RWDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCNGCGAILNPY 71
            +WD +  E+RD VRFSWNVWP++RLEATRIV P+GC+Y+P+K        ++YDP+RCNGC AILNPY
Sbjct:    3 QWDFYGPEQRDGVRFSWNVWPTTRLEATRIVAPIGCMYSPLKKIEGMPDSLAYDPIRCNGCSAILNPY 70          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: A0A835YT42_9STRA (Protein transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.800e-28
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    5 WDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCNGCGAILNPYAQV 74
            WD+   EERD VRFSWNVWPSS+LEATRIVVP GCLY+P+K        ++YDP+RCNGCGAILNPYAQ+
Sbjct:   10 WDLQGNEERDGVRFSWNVWPSSKLEATRIVVPTGCLYSPLKRLEGMPPALAYDPIRCNGCGAILNPYAQI 79          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: A0A7S3HKU0_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKU0_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.140e-27
Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    1 MDGRWDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCNGCGAILNPYAQV 74
            M  +WD    E+RD +R SWN WPSSR+EATRIVVP+GCLY+P+K   +    ++YDP+RCNGC A+LNPY QV
Sbjct:    1 MQQQWDFHGPEQRDGIRNSWNTWPSSRIEATRIVVPLGCLYSPLKRIENMPGSLAYDPIRCNGCTAVLNPYVQV 74          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: A0A6U3YQE8_9STRA (Protein transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.360e-27
Identity = 52/77 (67.53%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    1 MDGRWDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAP---MSYDPVRCNGCGAILNPYAQV 74
            M   WDV A EERD  R SWNVWPSSRLEATRIVVPVGCLYTP+K R  ++ P   + YDP+RCN CGA+LNPY Q+
Sbjct:   12 MGEPWDVLAMEERDGARLSWNVWPSSRLEATRIVVPVGCLYTPLK-RLGSMPPTGALPYDPIRCNNCGAVLNPYCQI 87          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: A0A7D9JDQ7_PARCT (Protein transport protein SEC23 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JDQ7_PARCT)

HSP 1 Score: 97.8 bits (242), Expect = 4.810e-25
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0
Query:   11 EERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCN--GCGAILNPYAQV 74
            E+RD VRFSWNVWPSSRLEATR+VVPVGC+YTP+K R D + P+ YDPV C+   C AILNP+ QV
Sbjct:   12 EDRDGVRFSWNVWPSSRLEATRMVVPVGCMYTPLKERPD-LPPICYDPVVCSRSSCKAILNPFCQV 76          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: F0XWM5_AURAN (Protein transport protein SEC23 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWM5_AURAN)

HSP 1 Score: 105 bits (263), Expect = 6.390e-25
Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    7 VFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCNGCGAILNPYAQV 74
            + A EERD VR SWNVWPSSRLEATRIV+P+G LYTP+K   +   P+ YDP+RCNGCGA+LNPY QV
Sbjct:    6 IQAQEERDGVRLSWNVWPSSRLEATRIVIPIGALYTPLKPIGNP-PPLIYDPIRCNGCGALLNPYCQV 72          
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Match: A0A7S2W7G0_9STRA (Protein transport protein SEC23 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7G0_9STRA)

HSP 1 Score: 105 bits (262), Expect = 8.720e-25
Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    3 GRWDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADTIAPMSYDPVRCNGCGAILNPYAQV 74
            G  DV+A EERD  R SWN+WPS+RLEATRIVVPVGC+YTP+K +   +  + YDP+RC+GCG+ LNPY QV
Sbjct:    5 GAQDVYAGEERDGARLSWNLWPSNRLEATRIVVPVGCMYTPLK-KWSNMPILPYDPIRCSGCGSTLNPYCQV 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13651.2938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK6_ECTSI2.410e-3585.71Protein transport protein SEC23 n=2 Tax=Ectocarpus... [more]
A0A7S2Y1K9_9STRA4.670e-3374.32Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A7S4D7Q8_HETAK6.230e-3168.92Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A482RVW2_9ARCH2.330e-2861.76Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A835YT42_9STRA6.800e-2870.00Protein transport protein SEC23 n=1 Tax=Tribonema ... [more]
A0A7S3HKU0_9STRA1.140e-2759.46Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A6U3YQE8_9STRA2.360e-2767.53Protein transport protein SEC23 n=1 Tax=Dictyocha ... [more]
A0A7D9JDQ7_PARCT4.810e-2569.70Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
F0XWM5_AURAN6.390e-2569.12Protein transport protein SEC23 n=1 Tax=Aureococcu... [more]
A0A7S2W7G0_9STRA8.720e-2563.89Protein transport protein SEC23 n=1 Tax=Rhizochrom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1670coord: 5..74
e-value: 6.8E-22
score: 80.1
NoneNo IPR availablePANTHERPTHR11141:SF10PROTEIN TRANSPORT PROTEIN SEC23Bcoord: 9..74
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 9..68
IPR037364Protein transport protein Sec23PANTHERPTHR11141PROTEIN TRANSPORT PROTEIN SEC23coord: 9..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13651contigH-canaliculatus_F_contig13651:2529..2750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13651.2938.1mRNA_H-canaliculatus_F_contig13651.2938.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13651 2529..2750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13651.2938.1 ID=prot_H-canaliculatus_F_contig13651.2938.1|Name=mRNA_H-canaliculatus_F_contig13651.2938.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=74bp
MDGRWDVFAAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKTRADT
IAPMSYDPVRCNGCGAILNPYAQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037364Sec23