prot_H-canaliculatus_F_contig13394.2759.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13394.2759.1
Unique Nameprot_H-canaliculatus_F_contig13394.2759.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length213
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13394.2759.1 vs. uniprot
Match: D8LIM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM1_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.190e-61
Identity = 131/214 (61.21%), Postives = 138/214 (64.49%), Query Frame = 0 
Query:    1 RYASG--RPALSKRYEFALVLNPNDEYRDAVEVLELALDLGEGTTGAADGAXXXXXXXXXXXXASPQKLDKAKRVRESLGGLQXXXXXXXXXRQASPDRSGASDSPPGLSTSQSGPGSGRKGAAAGGPPVVRPGLSEGLEG-GGGRRARLSLLDDLQEEEGRLTSRRKKELERRKKHRLFHFMVKMKEGIIVRRHLAHRTCDQVVLQSTVSGCR 211
            RY SG  R A +  YEFALVLNPNDEYRDAVEVLELALDLG+G  G                  SPQKLDK KR                                       SGPGSGRKG   GGPPVVRPGLSEGLEG GGGRR RLSLLDDLQEEEGRLTSRRKKELER+KKHRLFHF+ KM+EG+IVRRHLAHRTCDQ+VLQST   CR
Sbjct:   13 RYRSGAERAARNDEYEFALVLNPNDEYRDAVEVLELALDLGDGGGGVT---------------TSPQKLDKVKR---------------------------------------SGPGSGRKGG--GGPPVVRPGLSEGLEGVGGGRRTRLSLLDDLQEEEGRLTSRRKKELERKKKHRLFHFVHKMQEGVIVRRHLAHRTCDQIVLQST-DDCR 169
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13394.2759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIM1_ECTSI1.190e-6161.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 150..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13394contigH-canaliculatus_F_contig13394:570..2885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13394.2759.1mRNA_H-canaliculatus_F_contig13394.2759.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13394 570..2885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13394.2759.1 ID=prot_H-canaliculatus_F_contig13394.2759.1|Name=mRNA_H-canaliculatus_F_contig13394.2759.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=213bp
RYASGRPALSKRYEFALVLNPNDEYRDAVEVLELALDLGEGTTGAADGAA
AVGGGGAKKTTASPQKLDKAKRVRESLGGLQQQHHHHNHQRQASPDRSGA
SDSPPGLSTSQSGPGSGRKGAAAGGPPVVRPGLSEGLEGGGGRRARLSLL
DDLQEEEGRLTSRRKKELERRKKHRLFHFMVKMKEGIIVRRHLAHRTCDQ
VVLQSTVSGCRL*
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