prot_H-canaliculatus_F_contig1316.2602.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1316.2602.1
Unique Nameprot_H-canaliculatus_F_contig1316.2602.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length173
Homology
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.440e-108
Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 0
Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIGE 168
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEAR YAEDNGLIHMETSAKSAQNVK+IFVEI +
Sbjct:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQ 167          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: F0YJN1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJN1_AURAN)

HSP 1 Score: 288 bits (736), Expect = 3.860e-97
Identity = 141/166 (84.94%), Postives = 159/166 (95.78%), Query Frame = 0
Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEI 166
            M SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L++ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TNK  SFNGAKSWVKELQRRGDPNVIIALAGNKADL+++R+V+SEEA+QY+E+NG++HMETSAK+A +VK++F EI
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNK-ESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEI 165          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: A0A835Z7I1_9STRA (Rab5, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I1_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.070e-96
Identity = 146/162 (90.12%), Postives = 152/162 (93.83%), Query Frame = 0
Query:    5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEI 166
            RVCHFKLVLLGDTAVGKSCLVVRFVR+EFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SFNGAKSWVKELQRRGDPNV+IALAGNKADLE RRQV  EEA  YAE+NG+IHMETSAKSA NVK+IFVEI
Sbjct:    3 RVCHFKLVLLGDTAVGKSCLVVRFVRNEFFEFQEPTIGAAFLTQTVGLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-DSFNGAKSWVKELQRRGDPNVVIALAGNKADLEGRRQVHFEEAHAYAEENGIIHMETSAKSALNVKSIFVEI 163          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: A0A7S2RYM3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYM3_9STRA)

HSP 1 Score: 285 bits (729), Expect = 4.660e-96
Identity = 139/166 (83.73%), Postives = 156/166 (93.98%), Query Frame = 0
Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEI 166
            M + RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TNK  SFNGA+SWVKELQ+RGDPNV+IALAGNK+DLEH+R+V++EEA  YA +NG++HMETSAKSA NVK++FVEI
Sbjct:    1 MAANRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNK-DSFNGARSWVKELQKRGDPNVVIALAGNKSDLEHKRKVETEEAEAYALENGILHMETSAKSATNVKSLFVEI 165          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: A0A6V1MPB5_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1MPB5_HETAK)

HSP 1 Score: 284 bits (727), Expect = 8.770e-96
Identity = 144/166 (86.75%), Postives = 151/166 (90.96%), Query Frame = 0
Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEI 166
            M SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQ V L +ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SFNGAKSWVKELQRRGDPNV+IALAGNK DLE RRQV  EEA  YA +NG+IHMETSAKSA NV+ IF++I
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQTVSLPEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-DSFNGAKSWVKELQRRGDPNVVIALAGNKCDLEPRRQVPFEEAAAYAAENGIIHMETSAKSAHNVQQIFLDI 165          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: A0A1E7EUF1_9STRA (Ras-related small GTPase Rab5 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUF1_9STRA)

HSP 1 Score: 278 bits (710), Expect = 3.410e-93
Identity = 137/166 (82.53%), Postives = 154/166 (92.77%), Query Frame = 0
Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEI 166
            M+S RV HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ VQLD++TVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN   SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA+ YAE+NG++H+ETSAK+A NVK +FVE+
Sbjct:    1 MSSSRVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNP-DSFTGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEAQSYAEENGILHLETSAKNANNVKALFVEL 165          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: A0A067CKZ4_SAPPC (Ras-like protein Rab-5C n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CKZ4_SAPPC)

HSP 1 Score: 277 bits (708), Expect = 5.220e-93
Identity = 142/169 (84.02%), Postives = 152/169 (89.94%), Query Frame = 0
Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIGE 168
            M S + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SF GAKSWVKELQRRGDPNVIIALAGNKADLE RR+V  EEARQYAE+N ++HMETSAK+A NVK++FV I +
Sbjct:    1 MASNKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-DSFTGAKSWVKELQRRGDPNVIIALAGNKADLEARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQ 168          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: T0Q598_SAPDV (Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q598_SAPDV)

HSP 1 Score: 277 bits (708), Expect = 7.350e-93
Identity = 142/169 (84.02%), Postives = 152/169 (89.94%), Query Frame = 0
Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIGE 168
            M S + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SF GAKSWVKELQRRGDPNVIIALAGNKADLE RR+V  EEARQYAE+N ++HMETSAK+A NVK++FV I +
Sbjct:    1 MASNKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-DSFTGAKSWVKELQRRGDPNVIIALAGNKADLEARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQ 168          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: A0A5D6XMY9_9STRA (Uncharacterized protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A5D6XMY9_9STRA)

HSP 1 Score: 277 bits (708), Expect = 7.870e-93
Identity = 141/167 (84.43%), Postives = 151/167 (90.42%), Query Frame = 0
Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEI 166
            M  G+ CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA QYAEDN ++HMETSAK+A NVK++FV I
Sbjct:    1 MAQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLDDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAI 166          
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Match: A0A7S1ZIQ9_TRICV (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZIQ9_TRICV)

HSP 1 Score: 278 bits (711), Expect = 9.980e-93
Identity = 138/164 (84.15%), Postives = 151/164 (92.07%), Query Frame = 0
Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEI 166
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LD+ATVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN   SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA  YAE+NG++H+ETSAK+A NVK +FVEI
Sbjct:   45 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNP-DSFAGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYAEENGILHLETSAKNASNVKALFVEI 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1316.2602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC7_ECTSI1.440e-10895.83Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
F0YJN1_AURAN3.860e-9784.94Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835Z7I1_9STRA1.070e-9690.12Rab5, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RYM3_9STRA4.660e-9683.73Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A6V1MPB5_HETAK8.770e-9686.75Hypothetical protein n=2 Tax=Chattonellaceae TaxID... [more]
A0A1E7EUF1_9STRA3.410e-9382.53Ras-related small GTPase Rab5 n=1 Tax=Fragilariops... [more]
A0A067CKZ4_SAPPC5.220e-9384.02Ras-like protein Rab-5C n=1 Tax=Saprolegnia parasi... [more]
T0Q598_SAPDV7.350e-9384.02Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae Ta... [more]
A0A5D6XMY9_9STRA7.870e-9384.43Uncharacterized protein n=23 Tax=Oomycota TaxID=47... [more]
A0A7S1ZIQ9_TRICV9.980e-9384.15Hypothetical protein n=3 Tax=Mediophyceae TaxID=58... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 9..30
score: 50.96
coord: 148..170
score: 35.03
coord: 50..72
score: 50.66
coord: 113..126
score: 51.08
coord: 32..48
score: 32.53
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 11..170
e-value: 3.1E-12
score: 36.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..172
e-value: 6.0E-80
score: 281.6
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..172
e-value: 3.0E-28
score: 109.8
NoneNo IPR availableGENE3D3.40.50.300coord: 6..171
e-value: 8.2E-61
score: 206.8
NoneNo IPR availablePANTHERPTHR24073:SF1090RAS SMALL GTP-BINDING FAMILY PROTEIN-RELATEDcoord: 7..168
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 7..168
NoneNo IPR availablePROSITEPS51419RABcoord: 3..172
score: 30.783
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 9..163
e-value: 4.7E-31
score: 105.7
IPR001806Small GTPasePFAMPF00071Rascoord: 10..167
e-value: 9.3E-59
score: 197.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1316contigH-canaliculatus_F_contig1316:23511..27637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1316.2602.1mRNA_H-canaliculatus_F_contig1316.2602.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1316 23511..27637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1316.2602.1 ID=prot_H-canaliculatus_F_contig1316.2602.1|Name=mRNA_H-canaliculatus_F_contig1316.2602.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=173bp
MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKV
QLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKASSFNGA
KSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHME
TSAKSAQNVKNIFVEIGEGKES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom