prot_H-canaliculatus_F_contig12909.2427.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12909.2427.1
Unique Nameprot_H-canaliculatus_F_contig12909.2427.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length126
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12909.2427.1 vs. uniprot
Match: D7FJF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJF0_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 2.140e-49
Identity = 77/125 (61.60%), Postives = 98/125 (78.40%), Query Frame = 0 
Query:    1 MTGPYASCAVAMAVLFEDVPVIVTTILVQAYLAGADVSEWHAVAIVSIVFSMFAMHQKLMDLGLVRSVQDVLNPRPEADLVAEIGRCYWWVVFFRSVAMVAITVMAAWLVATFIIFFAPEPADRR 125
            ++GP++    A+++ FED P+I+ T  +QAYLAGADV EWHAVAIVS VFSMFAM QK+M LGLV+S++D+LNPR E +  AEIG CYWWVVF RS+A VA TV+ AW ++ FIIFFAP+P   R
Sbjct:   62 LSGPFSDIGTAVSISFEDFPIIIITTAIQAYLAGADVREWHAVAIVSYVFSMFAMQQKVMKLGLVKSIRDILNPRAEEERQAEIGPCYWWVVFVRSLAAVAFTVLLAWALSAFIIFFAPDPPGER 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12909.2427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJF0_ECTSI2.140e-4961.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..39
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 37..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12909contigH-canaliculatus_F_contig12909:988..2159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12909.2427.1mRNA_H-canaliculatus_F_contig12909.2427.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12909 925..3337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12909.2427.1 ID=prot_H-canaliculatus_F_contig12909.2427.1|Name=mRNA_H-canaliculatus_F_contig12909.2427.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=126bp
MTGPYASCAVAMAVLFEDVPVIVTTILVQAYLAGADVSEWHAVAIVSIVF
SMFAMHQKLMDLGLVRSVQDVLNPRPEADLVAEIGRCYWWVVFFRSVAMV
AITVMAAWLVATFIIFFAPEPADRR*
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