prot_H-canaliculatus_F_contig12868.2390.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12868.2390.1
Unique Nameprot_H-canaliculatus_F_contig12868.2390.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length185
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12868.2390.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 4.280e-11
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 0 
Query:  120 RVR-RRRYLDLEVFCDDEDGEELRLPPVRLDMRSAARGA 157
            RVR RRRYLDL+VFCDDEDGEELRLPPVRLDMRS+ARG+
Sbjct: 1039 RVRQRRRYLDLQVFCDDEDGEELRLPPVRLDMRSSARGS 1077
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BLAST of mRNA_H-canaliculatus_F_contig12868.2390.1 vs. uniprot
Match: A0A6H5KE41_9PHAE (UBA_e1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE41_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.010e-10
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0 
Query:  122 RRRRYLDLEVFCDDEDGEELRLPPVRLDMRSAARGA 157
            RR RYLDL+VFCDDEDGEELRLPPVRLDMRS+ARG+
Sbjct:  657 RRSRYLDLQVFCDDEDGEELRLPPVRLDMRSSARGS 692
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12868.2390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPC4_ECTSI4.280e-1189.74Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus ... [more]
A0A6H5KE41_9PHAE1.010e-1088.89UBA_e1_C domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12868contigH-canaliculatus_F_contig12868:73..639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12868.2390.1mRNA_H-canaliculatus_F_contig12868.2390.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12868 72..639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12868.2390.1 ID=prot_H-canaliculatus_F_contig12868.2390.1|Name=mRNA_H-canaliculatus_F_contig12868.2390.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=185bp
WATPAAPAAEGSEAAVAAPGDAVLSGSLPEAAATTATAGASASETQAEGC
RASRPLPPAAGSGGDGDGDGADVEGEAAGDEAWAREALEGWSDGDDDSDG
GGRTGAPPRTSRAVHERTPRVRRRRYLDLEVFCDDEDGEELRLPPVRLDM
RSAARGAGAGASLHAAAAAAAAVAEAASVGARESD
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