prot_H-canaliculatus_F_contig1285.2377.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1285.2377.1
Unique Nameprot_H-canaliculatus_F_contig1285.2377.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length251
Homology
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 4.180e-77
Identity = 168/236 (71.19%), Postives = 170/236 (72.03%), Query Frame = 0
Query:    4 GLGSLGSFRGFKAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFMELFCTTAPDTCPIR 239
            G  SLGSF GFKAHEFVAHA KTNCVA+GPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSS IESLRFDPTE FLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVT                             TDVQFSPDG+ILASAAA                            XXXXXXXXXXXXXXXXXXXXXX EFMELFC TAPDTCP R
Sbjct:    5 GPSSLGSFAGFKAHEFVAHAGKTNCVAVGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSGIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTTGSMDCQV---------------------TDVQFSPDGHILASAAADGQVKLWDLRAGKPMHTFQACSGAVRAIXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTR 219          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 9.700e-77
Identity = 223/236 (94.49%), Postives = 225/236 (95.34%), Query Frame = 0
Query:    4 GLGSLGSFRGFKAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFMELFCTTAPDTCPIR 239
            G  SLGSF  FKAHEFVAHA KTNCVA+GPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTE FLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDG+ILASAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EFMELFC TAPDTCP R
Sbjct:    5 GPSSLGSFAAFKAHEFVAHAGKTNCVAVGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGHILASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTR 240          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: A0A836CLK5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 6.760e-44
Identity = 87/158 (55.06%), Postives = 104/158 (65.82%), Query Frame = 0
Query:   13 GFKAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAA 170
            GFKAHEFVAH++K NCVAIGP  G VLATGG+DKRVNVW+IGRA+ IWSL GNSS IE + FD  E  L SGS+GGAVK +DL+ GKM R+FRGHMSNVT +  G+FD  ++                               +VQFSPDG++LAS A
Sbjct:   12 GFKAHEFVAHSTKVNCVAIGPH-GAVLATGGEDKRVNVWKIGRANHIWSLAGNSSPIECVCFDHAEENLYSGSSGGAVKQYDLTVGKMARNFRGHMSNVTALHSGAFDSAYLATGALDCVVKVWNTATKECVMAFKGHGAEVCEVQFSPDGFLLASGA 168          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: A0A1B6FE44_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6FE44_9HEMI)

HSP 1 Score: 102 bits (254), Expect = 3.570e-24
Identity = 46/98 (46.94%), Postives = 71/98 (72.45%), Query Frame = 0
Query:   14 FKAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNV 111
            +K  EF AH++  NC+A+G +SG+VL TGGDDK+VN+W IG+ + I SL G+ + +E++RF+ TE  + +GS+GG +K++DL A K+ R   GH S +
Sbjct:    9 WKVQEFKAHSANVNCLALGQKSGRVLVTGGDDKKVNLWAIGKNNCIMSLNGHITPVETVRFNHTEELVAAGSSGGVLKIWDLEATKIMRTLTGHRSGL 106          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: A0A482STH4_9ARCH (Katanin_con80 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STH4_9ARCH)

HSP 1 Score: 109 bits (272), Expect = 1.700e-23
Identity = 50/100 (50.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:   15 KAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVI 114
            +  EFVAH+++ NC+A+G +S QVLATGG+D +VN+WR+G  S+IW+L  N S IE L FD  E  +VSG+  G++K+FDL+ GK+ R+   H  NVT +
Sbjct:   11 RVQEFVAHSTQVNCLALGSKSSQVLATGGEDAKVNIWRVGSVSNIWTLGQNKSPIECLCFDADELCVVSGAMNGSLKVFDLNEGKLARNLGSHQVNVTSV 110          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: F0YMU1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMU1_AURAN)

HSP 1 Score: 103 bits (258), Expect = 3.120e-23
Identity = 53/101 (52.48%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   15 KAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGR----ASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNV 111
            K HE+VA  +   CVA+GPRS QVLA+GG+DKR NVWR+      A ++WSL GNSS I  L FD  E  LVSG+ GG+V+L+DL+ G+  R   GH + V
Sbjct:    5 KLHEWVASPAVVTCVALGPRSHQVLASGGEDKRANVWRLRPGDPGAQNVWSLGGNSSPISCLCFDDAENTLVSGAQGGSVRLYDLTEGRCARALNGHRNEV 105          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: A0A3B4BK80_9GOBI (Katanin p80 (WD repeat containing) subunit B 1 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BK80_9GOBI)

HSP 1 Score: 102 bits (253), Expect = 1.320e-22
Identity = 54/153 (35.29%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   18 EFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGYILASAA 170
            EF AH S+ +C+++G  SG++LATGG+D RVN+W + +A+ I SLTG+ S +E L+ + +E  +V+GS  G++K++DL A K+ R   GH +N+T + C      F+                                + FSPDG  LASA+
Sbjct:   14 EFEAHTSRVSCLSLGKSSGRLLATGGEDCRVNIWAVSKANCIMSLTGSKSPVECLQLNASEEQVVAGSQSGSIKIWDLEAAKL-RTLMGHKANITSLGCHPLSENFLASSSMDTNIKLWDVRRKGYILRYQGHTDAVRSLAFSPDGKWLASAS 165          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: A0A7S2CHB8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CHB8_9DINO)

HSP 1 Score: 98.6 bits (244), Expect = 4.080e-22
Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = 0
Query:   10 SFRGFKAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVID 115
            S R +K  E+ AHA  T C  +G +SGQVLATGG+D+RVN+W++G+++++ SLTG++S +E L FD  E  LV G AGG++++++L   KM     GH +  + ++
Sbjct:   41 SKRVWKLQEYTAHAGCTRCARLGEKSGQVLATGGEDRRVNIWKVGKSNAMMSLTGHNSTVECLVFDKQEEVLVVGCAGGSMQVWNLEYRKMAGTLTGHRTGCSSVE 146          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: UPI000719CBEA (katanin p80 WD40 repeat-containing subunit B1-like isoform X1 n=7 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CBEA)

HSP 1 Score: 104 bits (259), Expect = 8.950e-22
Identity = 47/112 (41.96%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    9 GSFRGFKAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTE-GFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSF 119
            G+ R +K  E+VAHA   NC+A+G +SG+V+ +GGDDK+VN+W +G+ + I SL+G+++ +E++RF  T+   +++GS  GA+K++DL A K+ R   GH +N+  +D   F
Sbjct:    7 GTKRAWKLQEYVAHAGNVNCLALGHKSGRVIVSGGDDKKVNLWLVGKPTCIMSLSGHTTPVEAVRFGGTDDSMVIAGSMSGALKIWDLEAAKIVRTLTGHKANIRSLDFHPF 118          
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Match: A0A7R9CXC1_TIMCR (Hypothetical protein n=1 Tax=Timema cristinae TaxID=61476 RepID=A0A7R9CXC1_TIMCR)

HSP 1 Score: 101 bits (252), Expect = 6.100e-21
Identity = 46/102 (45.10%), Postives = 71/102 (69.61%), Query Frame = 0
Query:   14 FKAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVID 115
            F   +FVAH S  NC+A+G +SG+VL TGGDDK+VN+W +G+ + I SL+G+ + +E ++F  TE  + +GS  GA+K++DL A K+ R   GH +++  ID
Sbjct:  280 FGQEDFVAHGSNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKHNCIMSLSGHITPVECVKFGHTEEHVCAGSQAGALKIWDLEAAKIVRTLTGHKASIRSID 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1285.2377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3J5_9PHAE4.180e-7771.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ17_ECTSI9.700e-7794.49Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A836CLK5_9STRA6.760e-4455.06WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A1B6FE44_9HEMI3.570e-2446.94Uncharacterized protein (Fragment) n=2 Tax=Cicadel... [more]
A0A482STH4_9ARCH1.700e-2350.00Katanin_con80 domain-containing protein n=1 Tax=ar... [more]
F0YMU1_AURAN3.120e-2352.48Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A3B4BK80_9GOBI1.320e-2235.29Katanin p80 (WD repeat containing) subunit B 1 n=1... [more]
A0A7S2CHB8_9DINO4.080e-2243.40Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
UPI000719CBEA8.950e-2241.96katanin p80 WD40 repeat-containing subunit B1-like... [more]
A0A7R9CXC1_TIMCR6.100e-2145.10Hypothetical protein n=1 Tax=Timema cristinae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 166..180
score: 40.27
coord: 124..138
score: 35.3
coord: 39..53
score: 30.23
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 97..137
e-value: 0.02
score: 24.1
coord: 182..221
e-value: 3.1E-6
score: 36.7
coord: 12..52
e-value: 0.0028
score: 26.9
coord: 140..179
e-value: 1.0E-11
score: 54.9
coord: 55..94
e-value: 2.3E-4
score: 30.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 183..221
e-value: 0.002
score: 18.9
coord: 142..179
e-value: 1.2E-8
score: 35.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 147..188
score: 18.963
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 62..103
score: 11.31
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 104..146
score: 10.074
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 19..61
score: 10.943
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 189..223
score: 9.706
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 101..243
e-value: 1.5E-38
score: 134.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 10..100
e-value: 1.1E-18
score: 69.4
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 38..114
e-value: 7.1E-7
score: 29.4
NoneNo IPR availablePANTHERPTHR19845:SF0KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1coord: 14..239
NoneNo IPR availablePANTHERPTHR19845KATANIN P80 SUBUNITcoord: 14..239
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 124..138
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 166..180
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 19..230
score: 46.508
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 14..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1285contigH-canaliculatus_F_contig1285:23100..25614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1285.2377.1mRNA_H-canaliculatus_F_contig1285.2377.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1285 23100..25614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1285.2377.1 ID=prot_H-canaliculatus_F_contig1285.2377.1|Name=mRNA_H-canaliculatus_F_contig1285.2377.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=251bp
MISGLGSLGSFRGFKAHEFVAHASKTNCVAIGPRSGQVLATGGDDKRVNV
WRIGRASSIWSLTGNSSAIESLRFDPTEGFLVSGSAGGAVKLFDLSAGKM
TRHFRGHMSNVTVIDCGSFDRRFVTTGSMDCQVKLWNVETKECAMAFKGH
NAEVTDVQFSPDGYILASAAADGQVKLWDLRAGKPMHTFQACSGPVRAIR
FNPQEFLLAAATSDRTVKLYDIEFMELFCTTAPDTCPIRQEGNVFRFPLN
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR024977Apc4_WD40_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep