prot_H-canaliculatus_F_contig128.2327.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig128.2327.1
Unique Nameprot_H-canaliculatus_F_contig128.2327.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length184
Homology
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: D8LKM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM1_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 4.910e-56
Identity = 132/164 (80.49%), Postives = 137/164 (83.54%), Query Frame = 0
Query:    1 MSEDGAERRRRLKALKDKANKSIKFRNYRPQDTTIRQQALESK-------GIATKGANKGDAAAEASTKLAKGEXXXXXXXXXXXXXXXXXAPAPSLIQQELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASSSSE 157
            MSE GAERR RLKALK+KANKSIKFRNYRPQD  IRQQAL+S        G  + GANKG+ AA  S K   G XXXXXXXXXXXXXXXXXAP  SLIQQELKKQKETQDE ELNIAPKKANWDLKRDVEKKLEKL+RRTQRAIVEIIRERMAEEAANASSS E
Sbjct:    1 MSESGAERRSRLKALKEKANKSIKFRNYRPQDAAIRQQALDSSKAGEPTSGSGSGGANKGEGAASPSGKSMGGXXXXXXXXXXXXXXXXXXAPESSLIQQELKKQKETQDEGELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANASSSGE 164          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: A0A835ZFC6_9STRA (Cwf18 pre-mRNA splicing factor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.420e-17
Identity = 62/94 (65.96%), Postives = 72/94 (76.60%), Query Frame = 0
Query:   89 SLIQQELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASSSSEXXXXXXXXXXXXXXEEDSGSSSEEE 182
            S+I+QEL+K K+ QDE  LNIAP+K +WDLKRD   KLEKLNRRTQRAIV+I+RE+MAEEAA  S       XXXXXXX    E+ SGSSSEEE
Sbjct:   86 SIIKQELRKVKDGQDEGTLNIAPRKPDWDLKRDAAPKLEKLNRRTQRAIVQILREKMAEEAAQGSXXX----XXXXXXXEESGEDGSGSSSEEE 175          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: A0A7S2W1E1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1E1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.500e-15
Identity = 64/158 (40.51%), Postives = 88/158 (55.70%), Query Frame = 0
Query:    1 MSEDGAE-RRRRLKALKDKANKSIKFRNYRPQDTTIRQQALESK-------GIATKGANKGDAAAEASTKLAKGEXXXXXXXXXXXXXXXXXAPAPSLIQQELKKQKETQDEEE-LNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEA 149
            M  + AE RR+RL+ +       +KFRNYRPQDT ++ +A+ +         +  + A   DA++  S K                        A ++IQQELK+    Q  EE LNIAP+K NWDLKRDV KK+EKLN+RTQ AIV++I+ER+  EA
Sbjct:    5 MEPESAEARRKRLRTMAAGGASKLKFRNYRPQDTDLKTKAVAAALPKPILDEVQAQPAPDKDASSVQSRK------------------------ATAVIQQELKEHVAEQGGEEVLNIAPRKPNWDLKRDVAKKMEKLNKRTQLAIVDLIKERIEREA 138          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: A0A1X2IBU1_9FUNG (mRNA splicing factor n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IBU1_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 1.720e-11
Identity = 59/165 (35.76%), Postives = 83/165 (50.30%), Query Frame = 0
Query:    1 MSEDGAERRRRLKALK--------------DKANKSIKFRNYRPQDTTIRQQALESKGIATKGANKGDAAAEASTKLAKGEXXXXXXXXXXXXXXXXXAPAPSLIQQELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAAN 151
            M E+   R+ RL+A++              D++ K +KFR+Y P D  ++Q       IAT   N     AE  TK                       P  +L +     +KE +D +  N+APKKANWDL+RDVEKKLEKL+RRTQ+AI+E IR+R+  E  +
Sbjct:    1 MEEEARRRKDRLEAIRKRKQASAPSNTRVDDESIKDLKFRSYTPTDENLKQHV----SIATP--NHIKITAETETK---------------------EIPTQTLAEAA---EKEKEDVDLFNLAPKKANWDLRRDVEKKLEKLDRRTQKAILETIRQRLTNEGGS 135          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: A0A7S2GKY8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKY8_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.260e-11
Identity = 53/129 (41.09%), Postives = 71/129 (55.04%), Query Frame = 0
Query:   23 IKFRNYRPQDTTIRQQALESKGIATKGANKGDAAAEASTKLAKGEXXXXXXXXXXXXXXXXXAPAPSLIQQELKK-QKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAA 150
            I+FRNYRPQD  ++ + ++   +        DAA   + +  K                         IQ+E+   QKE   ++ +NIAPKK NWDLKRDV KK+EKLNRRTQ AIVE+I+ER+  EAA
Sbjct:   18 IRFRNYRPQDKKLKVETVK---VPLPKPLLDDAARSEAVRAEKENGPTPYAKKNDNPEIEDP------IQREIAAHQKEQGGDDLINIAPKKPNWDLKRDVMKKMEKLNRRTQMAIVELIKERIEREAA 137          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: A0A7S2CFR4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFR4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.730e-11
Identity = 59/150 (39.33%), Postives = 79/150 (52.67%), Query Frame = 0
Query:    1 MSEDGAERRRRLK-ALKDKANKSIKFRNYRPQDTTIRQQALES---KGIATKGANKGDAAAEASTKLAKGEXXXXXXXXXXXXXXXXXAPAPSLIQQELKKQKETQDEEEL-NIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERM 145
            M+E    RR+RL+ A  +     ++FRNYRPQD+ ++ ++ E+   K +        D  A    K A GE                       I+ E+K     Q   EL NIAPKK NWDLKRD+ KK++KLNRRTQ AIVEII+ER+
Sbjct:   22 MAETEDARRKRLRTAASEGGAPKLRFRNYRPQDSKLKIESAETPLPKPVL-------DDVANTVPKAAPGEEPEKKKPKVE-----------DAIKAEIKAHVAEQGGNELLNIAPKKPNWDLKRDITKKMDKLNRRTQVAIVEIIKERI 153          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: S2JYD1_MUCC1 (Uncharacterized protein n=5 Tax=Mucor TaxID=4830 RepID=S2JYD1_MUCC1)

HSP 1 Score: 67.0 bits (162), Expect = 9.600e-11
Identity = 63/177 (35.59%), Postives = 88/177 (49.72%), Query Frame = 0
Query:    1 MSEDGAERRRRLKALK--------------DKANKSIKFRNYRPQDTTIRQQALESKGIATKGANKGDAAAEASTKLAKGEXXXXXXXXXXXXXXXXXAPAPSLIQQELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERM--------AEEAANASSS 155
            M ++  +R+ RL A++              D+A K++KFR+Y P D  ++Q    +K   T   N  +   +  TK A                          + Q  +KQKE  D    N+APKK NWDLKRDVEKKLE+L+RRTQRAI EIIR+R+        AE+ ANA ++
Sbjct:    1 MDQEAQKRKERLAAIRKRKLGNAAQNDRTSDEAEKALKFRSYTPNDEKLQQHVDIAKP--TDIGNTLETETKDFTKEA--------------------------LAQAAEKQKEEVDL--FNLAPKKPNWDLKRDVEKKLERLDRRTQRAIYEIIRQRLEGDKDATLAEKVANAEAT 147          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: A0A8H7BMD5_9FUNG (Coiled-coil domain-containing protein 12 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BMD5_9FUNG)

HSP 1 Score: 66.2 bits (160), Expect = 1.620e-10
Identity = 54/147 (36.73%), Postives = 79/147 (53.74%), Query Frame = 0
Query:    8 RRRRLKALKDKANKSIKFRNYRPQDTTIRQQALESKGIATKGANKGDAAAEASTKLAKGEXXXXXXXXXXXXXXXXXAPAPSLIQQELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASS 154
            R+R+L +  DK+++ + FR+Y P D  ++    E+  I T      D   E      K                    P  +L +  +K+++E    +  N+APKK NWDLKRDVEKKLEKL+RRT+RAI+EIIRER+  E  + +S
Sbjct:   16 RKRKLGSTSDKSDRVLSFRSYTPNDEKLK----ENVNIVTP-----DDIGETVESETK------------------HIPKETLEKAAIKEKEEV---DLFNLAPKKPNWDLKRDVEKKLEKLDRRTKRAILEIIRERLMSENGDKTS 132          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: A0A1X2GN64_9FUNG (mRNA splicing factor n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GN64_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 2.570e-10
Identity = 33/49 (67.35%), Postives = 45/49 (91.84%), Query Frame = 0
Query:   99 KETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAE 147
            KET + +  N+APKKANWDL+RDVEKK++KL+RRTQRAI++IIR+R+A+
Sbjct:   84 KETDEVDLFNLAPKKANWDLRRDVEKKMQKLDRRTQRAILDIIRQRLAQ 132          
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Match: A0A067R8I9_ZOONE (Coiled-coil domain-containing protein 12 n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R8I9_ZOONE)

HSP 1 Score: 65.9 bits (159), Expect = 2.890e-10
Identity = 56/167 (33.53%), Postives = 79/167 (47.31%), Query Frame = 0
Query:    1 MSEDGAERRRRLKALKDKANKSIK--------------------FRNYRPQDTTIRQQALESKGIATKGANKGDAAAEASTKLAKGEXXXXXXXXXXXXXXXXXAPAPSLIQQELKKQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAE 147
            M ++  +R+ RLKALK K +++ K                    FR+YRPQD T+++  L         A  GD  AE   +L  G                       ++ +EL         +  N+AP+K +WDLKRDV KKLE+L RRTQ+AI E+IRER+ E
Sbjct:   10 MEDEALKRKERLKALKRKHDETDKEGDKSEYVSTEGLASLPRPKFRSYRPQDVTLKENILPV-------AKPGDVEAEVKDQLGSGNV--------------------KVVIEEL---------DITNLAPRKPDWDLKRDVAKKLERLERRTQKAIAELIRERLKE 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig128.2327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKM1_ECTSI4.910e-5680.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFC6_9STRA2.420e-1765.96Cwf18 pre-mRNA splicing factor-domain-containing p... [more]
A0A7S2W1E1_9STRA2.500e-1540.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1X2IBU1_9FUNG1.720e-1135.76mRNA splicing factor n=1 Tax=Absidia repens TaxID=... [more]
A0A7S2GKY8_9STRA2.260e-1141.09Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2CFR4_9STRA4.730e-1139.33Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
S2JYD1_MUCC19.600e-1135.59Uncharacterized protein n=5 Tax=Mucor TaxID=4830 R... [more]
A0A8H7BMD5_9FUNG1.620e-1036.73Coiled-coil domain-containing protein 12 n=1 Tax=A... [more]
A0A1X2GN64_9FUNG2.570e-1067.35mRNA splicing factor n=1 Tax=Hesseltinella vesicul... [more]
A0A067R8I9_ZOONE2.890e-1033.53Coiled-coil domain-containing protein 12 n=1 Tax=Z... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..139
NoneNo IPR availableCOILSCoilCoilcoord: 56..83
IPR013169mRNA splicing factor, Cwf18PFAMPF08315cwf18coord: 2..145
e-value: 5.8E-19
score: 69.1
IPR013169mRNA splicing factor, Cwf18PANTHERPTHR31551FAMILY NOT NAMEDcoord: 17..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig128contigH-canaliculatus_F_contig128:20643..24971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig128.2327.1mRNA_H-canaliculatus_F_contig128.2327.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig128 20643..25735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig128.2327.1 ID=prot_H-canaliculatus_F_contig128.2327.1|Name=mRNA_H-canaliculatus_F_contig128.2327.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=184bp
MSEDGAERRRRLKALKDKANKSIKFRNYRPQDTTIRQQALESKGIATKGA
NKGDAAAEASTKLAKGEEEKEEEEEEEEEGGKRRAPAPSLIQQELKKQKE
TQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAA
NASSSSEEGSGSESGSGSSSGEEDSGSSSEEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013169mRNA_splic_Cwf18