prot_H-canaliculatus_F_contig12296.1964.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig12296.1964.1
Unique Name	prot_H-canaliculatus_F_contig12296.1964.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	300

Homology

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BLAST of mRNA_H-canaliculatus_F_contig12296.1964.1 vs. uniprot
Match: D7G174_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G174_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.700e-22
Identity = 64/105 (60.95%), Postives = 73/105 (69.52%), Query Frame = 0

Query:    1 FVEQGGEFDTAVSEIPVNMSVIRATIGPGESSAWAGKSLDFWQGLEPLSLKRERDRERLERSLGGRTKAAGAPSGXXXXXXXRPSPGGAGVRE--RQHRLYDVNG 103
            FVEQGGE +  V EIPVNM+VIRATIGPGESSAWAGKSLD W+GLEPL+++RE  RERL   LG  T  A            R SPG AGV+    +HRLYD+NG
Sbjct:  579 FVEQGGEIEAGVGEIPVNMTVIRATIGPGESSAWAGKSLDNWKGLEPLTVEREGVRERL---LGSGTADAPLELEEEEGHLLR-SPGLAGVKNGRERHRLYDLNG 679

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BLAST of mRNA_H-canaliculatus_F_contig12296.1964.1 vs. uniprot
Match: A0A6H5JIC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC2_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 3.490e-21
Identity = 62/105 (59.05%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 FVEQGGEFDTAVSEIPVNMSVIRATIGPGESSAWAGKSLDFWQGLEPLSLKRERDRERLERSLGGRTKAAGAPSGXXXXXXXRPSPGGAGVRE--RQHRLYDVNG 103
            FVEQGG+ +  V EIPVNM+VIRATIGPGESSAWAGKSLD W+GLEPL+++RE  RERL   LG  T  A            R SPG AG +    +HRLYD+NG
Sbjct:  612 FVEQGGDIEAGVGEIPVNMTVIRATIGPGESSAWAGKSLDNWKGLEPLTVEREGVRERL---LGSGTADAPLELEEEEGHLLR-SPGLAGGKNGRERHRLYDLNG 712

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig12296.1964.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig12296.1964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G174_ECTSI	1.700e-22	60.95	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JIC2_9PHAE	3.490e-21	59.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 214..233
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..213
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 234..300

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig12296	contig	H-canaliculatus_F_contig12296:1759..3187 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig12296.1964.1	mRNA_H-canaliculatus_F_contig12296.1964.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig12296 1758..3187 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig12296.1964.1 ID=prot_H-canaliculatus_F_contig12296.1964.1|Name=mRNA_H-canaliculatus_F_contig12296.1964.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=300bp
FVEQGGEFDTAVSEIPVNMSVIRATIGPGESSAWAGKSLDFWQGLEPLSL
KRERDRERLERSLGGRTKAAGAPSGAGSGSGVRPSPGGAGVRERQHRLYD
VNGGGTQKGKRGGGGGKVAVAGKDPSKKRPLSSGGGKGGEGEGGKKPKKR
SSPATVNASGGGGGGGTSSGSGGSGGSGGSGRSGSGRNDNGGGGGSSAAR
DGGSSASSSGSGNGSGGAAAAAAAAAAAAAVLAERMMVQGHRRQWPWQGR
PRRGSKSMSWWRSASGVWDRRSWVPQWHASKTRRSQKRLRRWPSLSPRRT