prot_H-canaliculatus_F_contig1155.1370.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1155.1370.1
Unique Nameprot_H-canaliculatus_F_contig1155.1370.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length253
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1155.1370.1 vs. uniprot
Match: D7G706_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G706_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 6.270e-61
Identity = 123/230 (53.48%), Postives = 145/230 (63.04%), Query Frame = 0 
Query:   30 TRSRTSLPRARAKAAPLPQADRSQGIKGFRRATTASARI-DGS---RGDTHPRSGMFLPQAPYEAHGSNKFYTASSVCTLGRIFSDSNLVQPTWSKVATSPWGEAARVTGGYGERLLNGANSVESPDFMFSKRFGGHVKDYSFKKRPRPFTYNGEAKTAVSCDTPNFFRARHTQIYGTSIKKIHKPRLIKMLLGRQIMAEPEVPETTWGLLGGPPLNWG--ETEGDGLSI 253
            TRS+T  P+ARA+ A LPQ DR++  +G  RATTA +R  D S   RGD   RSG+FLPQ  +EA  ++KFYTAS VCTL RIFSDS+L+QP+W KVATSPWGEAARVTGGYGERLLNGANSVESPDFM SK                                          +YG  I+KI KPRL+KM LG+QI+AEPEVPET    L G PL+WG     G G+S+
Sbjct:    3 TRSQTHWPQARAQTANLPQPDRTRSERGTLRATTARSRARDASSRRRGDA--RSGIFLPQVKFEADENSKFYTASPVCTLSRIFSDSSLIQPSWPKVATSPWGEAARVTGGYGERLLNGANSVESPDFMLSK------------------------------------------VYGRPIEKIDKPRLLKMHLGKQIIAEPEVPETD---LAGGPLDWGGMAVTGSGVSV 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1155.1370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G706_ECTSI6.270e-6153.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..253
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1155contigH-canaliculatus_F_contig1155:12741..14995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1155.1370.1mRNA_H-canaliculatus_F_contig1155.1370.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1155 12741..14995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1155.1370.1 ID=prot_H-canaliculatus_F_contig1155.1370.1|Name=mRNA_H-canaliculatus_F_contig1155.1370.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=253bp
MNKRRERVGGGQTTIFTAPVSARTFTPLPTRSRTSLPRARAKAAPLPQAD
RSQGIKGFRRATTASARIDGSRGDTHPRSGMFLPQAPYEAHGSNKFYTAS
SVCTLGRIFSDSNLVQPTWSKVATSPWGEAARVTGGYGERLLNGANSVES
PDFMFSKRFGGHVKDYSFKKRPRPFTYNGEAKTAVSCDTPNFFRARHTQI
YGTSIKKIHKPRLIKMLLGRQIMAEPEVPETTWGLLGGPPLNWGETEGDG
LSI
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