prot_H-canaliculatus_F_contig115.1326.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig115.1326.1
Unique Nameprot_H-canaliculatus_F_contig115.1326.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length603
Homology
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BLAST of mRNA_H-canaliculatus_F_contig115.1326.1 vs. uniprot
Match: D7G991_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G991_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.100e-39
Identity = 82/139 (58.99%), Postives = 101/139 (72.66%), Query Frame = 0 
Query:  379 MLRHQERHLEWNTEPAFGKRVLVRFENETYYPGTINTKGKSAKDLSHSKGRWGVLFDDCTKDRFEDGATDVMVSSRPRLTSMTKELHDFYLSQENGSTLLVGVEVVAEGDVGSYDEGGSEHDEGKRQANTNGTRRNESG 517
            MLRHQER  EWNT+PAFGKRV+V FE+  YYPGTI+T G SAKD+ H+KGRWGVLFDDCTKDRF DGATDVMVS++P   S++ EL D+YL Q NG  L+ GVEVV           G+  D G+  A+T G+++ + G
Sbjct:    1 MLRHQERLAEWNTKPAFGKRVMVEFEDGIYYPGTISTDGDSAKDIYHAKGRWGVLFDDCTKDRFHDGATDVMVSNQPSPRSISAELRDYYLKQANGRELMEGVEVVP----------GAAEDNGQSPADTAGSKKKKHG 129
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig115.1326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G991_ECTSI1.100e-3958.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..603
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig115contigH-canaliculatus_F_contig115:45610..50464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig115.1326.1mRNA_H-canaliculatus_F_contig115.1326.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig115 45610..50644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig115.1326.1 ID=prot_H-canaliculatus_F_contig115.1326.1|Name=mRNA_H-canaliculatus_F_contig115.1326.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=603bp
MVCMSRAFAHITAANATQGDPFTPRSPIGVPRPCEKVPKGETAGSISSPP
NRRRLAWSSLGQGSSSRRGKRGTDLGVEDDGAWSGLEQALKASEEESAAP
VGNAEGRVAGRNGKGVVRSRRPANQGDKEMGPSAQERLKPSLPVRPDLGF
PLPPPPRRAAAQALYRISSLSSPGACSVGLCPRAVSAGSRKQSSAAACRM
DTAAAAAGGASEVERADNAKAKEEEAVGRGRGEAGGKNGEQLTTTEAVSS
GPARGWRGAGAPGAKESGKINGTTVSGTRGGSGSGGGRDRARGARARTMM
DGGVKGPGEAPGGGSTAMRQTDATLLGRLDARVFRFVPAGECEEEECMER
GKTHCHRGPGCDCTSIRDTHLWPAEVKSMLRHQERHLEWNTEPAFGKRVL
VRFENETYYPGTINTKGKSAKDLSHSKGRWGVLFDDCTKDRFEDGATDVM
VSSRPRLTSMTKELHDFYLSQENGSTLLVGVEVVAEGDVGSYDEGGSEHD
EGKRQANTNGTRRNESGADKREQRESSESNKLERGSPDDLAGGGGREVTG
TRKRALKAGTKARDRSFKPMDDAGDASESKKKQKRAIAAVAATVEKACVE
EEE
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