mRNA_H-canaliculatus_F_contig115.1326.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig115.1326.1 vs. uniprot
Match: D7G991_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G991_ECTSI) HSP 1 Score: 163 bits (412), Expect = 2.270e-39 Identity = 82/139 (58.99%), Postives = 101/139 (72.66%), Query Frame = 1 Query: 1315 MLRHQERHLEWNTEPAFGKRVLVRFENETYYPGTINTKGKSAKDLSHSKGRWGVLFDDCTKDRFEDGATDVMVSSRPRLTSMTKELHDFYLSQENGSTLLVGVEVVAEGDVGSYDEGGSEHDEGKRQANTNGTRRNESG 1731 MLRHQER EWNT+PAFGKRV+V FE+ YYPGTI+T G SAKD+ H+KGRWGVLFDDCTKDRF DGATDVMVS++P S++ EL D+YL Q NG L+ GVEVV G+ D G+ A+T G+++ + G Sbjct: 1 MLRHQERLAEWNTKPAFGKRVMVEFEDGIYYPGTISTDGDSAKDIYHAKGRWGVLFDDCTKDRFHDGATDVMVSNQPSPRSISAELRDYYLKQANGRELMEGVEVVP----------GAAEDNGQSPADTAGSKKKKHG 129 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig115.1326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig115.1326.1 >prot_H-canaliculatus_F_contig115.1326.1 ID=prot_H-canaliculatus_F_contig115.1326.1|Name=mRNA_H-canaliculatus_F_contig115.1326.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=603bp MVCMSRAFAHITAANATQGDPFTPRSPIGVPRPCEKVPKGETAGSISSPPback to top mRNA from alignment at H-canaliculatus_F_contig115:45610..50644- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig115.1326.1 ID=mRNA_H-canaliculatus_F_contig115.1326.1|Name=mRNA_H-canaliculatus_F_contig115.1326.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5035bp|location=Sequence derived from alignment at H-canaliculatus_F_contig115:45610..50644- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig115:45610..50644- >mRNA_H-canaliculatus_F_contig115.1326.1 ID=mRNA_H-canaliculatus_F_contig115.1326.1|Name=mRNA_H-canaliculatus_F_contig115.1326.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig115:45610..50644- (Hapterophycus canaliculatus Oshoro5f female)back to top |