prot_H-canaliculatus_F_contig113.1168.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig113.1168.1
Unique Nameprot_H-canaliculatus_F_contig113.1168.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length455
Homology
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BLAST of mRNA_H-canaliculatus_F_contig113.1168.1 vs. uniprot
Match: D7G5B2_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B2_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 6.760e-56
Identity = 188/215 (87.44%), Postives = 195/215 (90.70%), Query Frame = 0 
Query:    1 MKRGKRCFIEDCLAAAPFASPSNPDVHACEIHKKRDFVNMRNKRCLEPGCYRNPHYGVSRLIDPNSKAQYXXXXXXXXXXXXXXXXXXXXXXXXXXRFSLPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDRVLIPGSTLKRGKFCEVHCDVSELTDKDAVVNDDISRNKKRSRVWM 215
            MKRGKRCFI+ CLA APFASP  PDVHACE+HKKRDFVNMRNKRCLEPGCYRNPHYGVSRLIDPNSKAQY   XXXXXXXXXXXXXXXXXXXXXX RFSLPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KDRV+IPGS  KRGKFCE+HCDV+EL DKD V  D  + +KKR R WM
Sbjct:    1 MKRGKRCFIQSCLAPAPFASPLQPDVHACEVHKKRDFVNMRNKRCLEPGCYRNPHYGVSRLIDPNSKAQYCTKXXXXXXXXXXXXXXXXXXXXXXPRFSLPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRVVIPGSAKKRGKFCEIHCDVNELVDKD-VSTDGTASDKKRGRAWM 214
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig113.1168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5B2_ECTSI6.760e-5687.44EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig113contigH-canaliculatus_F_contig113:18729..22813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig113.1168.1mRNA_H-canaliculatus_F_contig113.1168.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig113 18729..22813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig113.1168.1 ID=prot_H-canaliculatus_F_contig113.1168.1|Name=mRNA_H-canaliculatus_F_contig113.1168.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=455bp
MKRGKRCFIEDCLAAAPFASPSNPDVHACEIHKKRDFVNMRNKRCLEPGC
YRNPHYGVSRLIDPNSKAQYCTKHKAPGMQNVNGGRCAGPDCSKQPRFSL
PGEKGKYCSKHREDGMVDVLYTPCAAEGCTKHPHFGHVEGGPRYCAKHRA
EGMVDVKHRRCAIKSCRKDRVLIPGSTLKRGKFCEVHCDVSELTDKDAVV
NDDISRNKKRSRVWMGETEDEMERMSSEGSQVGSSMGDAGKNMNLSYDYS
STRSVGPSIREAAQGLAHLATLARRERTPQCSDEAAASMSRGRGHIPGHG
SYQPAEHSESFSRGAARALASRGPSQAEREHHVVKPGSERPLFYPASTAS
SEPGPYPLFKRDRLESDAALEAVRPRMSPGLCSNTGTGSGTPSPAPASPF
RLRYFEPESSSSEYSAYPPPWEYTRERPSASWTEGSNVSGRLPTHGWNNH
PSAP*
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