prot_H-canaliculatus_F_contig1099.906.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1099.906.1
Unique Nameprot_H-canaliculatus_F_contig1099.906.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length68
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1099.906.1 vs. uniprot
Match: D7FMM2_ECTSI (GE20757 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM2_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.710e-11
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:    1 MGVWWAILGVALPTLRGRAKIAFGLASPLFITSLILYVSG 40
            MGVWWAILGVALP LRG  ++A G ASP FIT+LI+YVSG
Sbjct:  235 MGVWWAILGVALPALRGPGRVALGFASPAFITALIMYVSG 274
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1099.906.1 vs. uniprot
Match: A0A6S9K4Z3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K4Z3_HETAK)

HSP 1 Score: 51.6 bits (122), Expect = 5.950e-6
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    3 VWWAILGVALPTLRGRAKIAFGLASPLFITSLILYVSG 40
            VWW +LG+A P LRG  ++A GLASPLF T L+  VSG
Sbjct:  228 VWWGLLGLAAPLLRGPGQLALGLASPLFTTLLLTQVSG 265
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1099.906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMM2_ECTSI1.710e-1175.00GE20757 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM2... [more]
A0A6S9K4Z3_HETAK5.950e-660.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..47
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1099contigH-canaliculatus_F_contig1099:16767..17838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1099.906.1mRNA_H-canaliculatus_F_contig1099.906.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1099 16762..17903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1099.906.1 ID=prot_H-canaliculatus_F_contig1099.906.1|Name=mRNA_H-canaliculatus_F_contig1099.906.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=68bp
MGVWWAILGVALPTLRGRAKIAFGLASPLFITSLILYVSGCLLCWTSSTT
RSTGMTRGIESGRKTPP*
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