prot_H-canaliculatus_F_contig10978.895.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10978.895.1
Unique Nameprot_H-canaliculatus_F_contig10978.895.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length402
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10978.895.1 vs. uniprot
Match: A0A6H5K9F0_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9F0_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 3.290e-166
Identity = 282/384 (73.44%), Postives = 311/384 (80.99%), Query Frame = 0 
Query:    1 MTEVGRLLSVAPEDQDLLCVEVSALGQAPIPGA-LPRVSCDRWHRHQQEEEVLPMSSANQAHEDFLTSLLLKTDAYRPLQTSLRCMEDPGFLDMRGAVVNWFAKVAVSYDFANETVVAALSHFDSRYVSLTVAPVSDHMLLQLAAYVALLIASKMGETSPLRMKSLANLTGRMFTPLQVKRLEMDMISKLNFRLAPPSADETFHCLSSLLHNNSSNN----------YHSDILAAGSYYLKKARARTCWFRHSPYTLAVAALATTYNSMGLGKLRRRLLRECDARARAVTGRGVDIHGVAACAEAMA-NERAAXXXXXXXXARAMC--VRGSTESPVCGGGSGGDSTVGXXXXXXXDTAVKSGWGSPTGVAQGAELLQKAAFSA 370
            M+E+ RLL    ED DLLCVEVSALGQAP+P   LPRVSCD W   Q+++EV    SA+QAHE+FLTSLL KT+AYRPL+TS + MED  FLDMRGAVVNWFAKV+VSYDFANETVVAALSHFD RYVSLTV PV+DHMLLQLAAYVALLIASKMGET PLRM+SLANLTGRMFTPLQVK+LEMDMISKLNFRLAPPS DE  HCLSSLL  +SS++           HSD+L+A S+YLK+ARARTCWFRH+PYTLAVAALAT YNS+GLGK RRRLLRECDAR+RAVTGRGVD+HGVAACA+AM  +ERAA XXXXXXX        RGSTESPVCGG +               TA K GWGSPTGVAQGAELLQKAAFSA
Sbjct:    1 MSELSRLLPRGEEDTDLLCVEVSALGQAPVPATRLPRVSCDGWQL-QEKQEVFRDGSADQAHEEFLTSLLAKTNAYRPLETSWQVMEDAEFLDMRGAVVNWFAKVSVSYDFANETVVAALSHFD-RYVSLTVTPVNDHMLLQLAAYVALLIASKMGETCPLRMRSLANLTGRMFTPLQVKQLEMDMISKLNFRLAPPSPDEALHCLSSLLLRSSSSSDNKSGRGGVPLHSDVLSASSHYLKRARARTCWFRHAPYTLAVAALATAYNSVGLGKERRRLLRECDARSRAVTGRGVDVHGVAACADAMVRDERAAAXXXXXXXXXXNSGHARGSTESPVCGGSN---------------TAAKDGWGSPTGVAQGAELLQKAAFSA 367
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10978.895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9F0_9PHAE3.290e-16673.44Cyclin N-terminal domain-containing protein n=2 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 78..194
e-value: 2.3E-24
score: 88.0
NoneNo IPR availableGENE3D1.10.472.10coord: 65..295
e-value: 2.3E-24
score: 88.0
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 90..193
e-value: 5.4E-16
score: 58.5
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 87..246
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 60..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10978contigH-canaliculatus_F_contig10978:3..2751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10978.895.1mRNA_H-canaliculatus_F_contig10978.895.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10978 3..2751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10978.895.1 ID=prot_H-canaliculatus_F_contig10978.895.1|Name=mRNA_H-canaliculatus_F_contig10978.895.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=402bp
MTEVGRLLSVAPEDQDLLCVEVSALGQAPIPGALPRVSCDRWHRHQQEEE
VLPMSSANQAHEDFLTSLLLKTDAYRPLQTSLRCMEDPGFLDMRGAVVNW
FAKVAVSYDFANETVVAALSHFDSRYVSLTVAPVSDHMLLQLAAYVALLI
ASKMGETSPLRMKSLANLTGRMFTPLQVKRLEMDMISKLNFRLAPPSADE
TFHCLSSLLHNNSSNNYHSDILAAGSYYLKKARARTCWFRHSPYTLAVAA
LATTYNSMGLGKLRRRLLRECDARARAVTGRGVDIHGVAACAEAMANERA
AAAAAAAATARAMCVRGSTESPVCGGGSGGDSTVGNGNGNGDDTAVKSGW
GSPTGVAQGAELLQKAAFSAAAGRGGGGERDGGGGGGRGGGGGVPLGGGF
SP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR039361Cyclin
IPR006671Cyclin_N