prot_H-canaliculatus_F_contig10745.708.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10745.708.1
Unique Nameprot_H-canaliculatus_F_contig10745.708.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length124
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10745.708.1 vs. uniprot
Match: D8LMZ2_ECTSI (COG2350: Uncharacterized protein conserved in bacteria n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ2_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 5.690e-74
Identity = 110/123 (89.43%), Postives = 117/123 (95.12%), Query Frame = 0 
Query:    1 MRDAMAKEGLDRECEYPVNFGKYDLFENMKWLKTEVEKKQQQQYMEHRLKLYQQRDRRIEKEQINEGALFRPGAYVYMGKRTETEWYDYWPSRVGPDADAAGEEFYSLKASYPPVDHFEDDLD 123
            MRD MAKEGLDRECEYPV FGKYDLFENMKWLKTEVEKKQ+QQYMEHRLKLYQQRDRRIE+E+INEGALFRPG YVYMGKRTETEWYDYWP++ GPDADAAGEEFY++ A YPPVDHFEDDLD
Sbjct:  411 MRDMMAKEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRDRRIEREEINEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDLD 533
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10745.708.1 vs. uniprot
Match: A0A6H5JNB6_9PHAE (YCII domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB6_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 8.830e-63
Identity = 108/184 (58.70%), Postives = 117/184 (63.59%), Query Frame = 0 
Query:    1 MRDAMAKEGLDRECEYPVNFGKYDLFENMKWLKTEVEKKQQQQYMEHRLKLYQQR-------------------------------------------------------------DRRIEKEQINEGALFRPGAYVYMGKRTETEWYDYWPSRVGPDADAAGEEFYSLKASYPPVDHFEDDLD 123
            MRD MA+EGLDRECEYPV FGKYDLFENMKWLKTEVEKKQ+QQYMEHRLKLYQQR                                                             DRRIE+E++NEGALFRPG YVYMGKRTETEWYDYWP++ GPDADAAGEEFY++ A YPPVDHFEDDLD
Sbjct:  322 MRDMMAQEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRCVGGGAVVTSADDTPRWYDGMPSYGGRNVRAGTAVKAPVSAAVEGFSDVWLKAAHTVVVARDRRIEREEVNEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDLD 505
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10745.708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMZ2_ECTSI5.690e-7489.43COG2350: Uncharacterized protein conserved in bact... [more]
A0A6H5JNB6_9PHAE8.830e-6358.70YCII domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10745contigH-canaliculatus_F_contig10745:1268..2913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10745.708.1mRNA_H-canaliculatus_F_contig10745.708.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10745 839..3650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10745.708.1 ID=prot_H-canaliculatus_F_contig10745.708.1|Name=mRNA_H-canaliculatus_F_contig10745.708.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=124bp
MRDAMAKEGLDRECEYPVNFGKYDLFENMKWLKTEVEKKQQQQYMEHRLK
LYQQRDRRIEKEQINEGALFRPGAYVYMGKRTETEWYDYWPSRVGPDADA
AGEEFYSLKASYPPVDHFEDDLD*
back to top