prot_H-canaliculatus_F_contig1028.292.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1028.292.1
Unique Nameprot_H-canaliculatus_F_contig1028.292.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length660
Homology
BLAST of mRNA_H-canaliculatus_F_contig1028.292.1 vs. uniprot
Match: D7G1J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J1_ECTSI)

HSP 1 Score: 559 bits (1440), Expect = 1.410e-191
Identity = 361/655 (55.11%), Postives = 405/655 (61.83%), Query Frame = 0
Query:   14 PPKILARNHAVQAVGETYFRVALLGMAAASVLAIVAVSIGSTRGMFEFRIDRCDCLLTSEAQNAVDEGQDCVFGQDMLGVNIGWKSFVIDHAVSTEGCLDGWEGTTDIGTPFGDGIYKKKTEVYGNGATGAADACVGLFVVSAAIAVIMYKTVKMSYAGPGSIYSIGLHNIAMLCLLLSIASAISVMAFWGRVQGKLGNLSSSLAVTLFRATLDVCQDDWDTVGFPIDDEE----FCEAAPWTFDVPLYASWTAIAHVGIMFLASVWILGRSALVEGILDGSKLASGKTVTPRVVEFEQAVGRALATTEDPDYDVPGNKLYTGEQNIMIRPYPLPGSVKKVAKAAEALVSPLRNMSPTRSHARGKSKAAGLSRTSNVVDNNEGFTPKI-IGSDLNGEEGYMLNSGSTGSAAGYNESQGPPSPGPVRPIPKPLL---SKAAXXXXXXXXXXXXXXXXQPGGKHASSEESEIRGTDGSKPTTGGGHARQSSRTTMMPKMPSLGGFGRKTXXXXXXXXXXXXXXXXXXXXGDVDSDEEGSSSSVIVLPVEGDGMGAGAAPGTRHGKTRSEIDWNSIMEAGGSGDGNTGVEKSHQEG-KGDGSPHLSPSMLGDLDMMFNGPSVKDGLTLGAITEDPREDMISEFTITPRKKGSATQFEV 659
            PPK+  RN AVQAVGE YF+VAL                                                        V+IGWKSFVID A STEGCLDGWEGT DIG+PFGDGIY+KK+ VYGNGATGAADA VGLFVVSA IA+IM+KTVKMSY GPGSIYSIGLHNIA++CLLLS+AS IS+ AFWGR+QGKLG++ SSLA TLF ATLDVC+DDWDTVGFP+ + E    FC+A PW F+VPLYA WTAIAHV +MFL SVWIL +S LVEGILDGSKL  GK VTPRVVE+EQAVGRALATTEDPDYDV  NKLYTGE NIMIRPYPLPGSVKKVAKAAEALVSPLR M       +G S       T    +   G  PKI +G D+ G+           +  G+N S    SPGPV+ IP+      SKAA XXXXXXXXXXXXXXX PG                 KP  GG   R +S                                          S+EE       V P     +G G      HGKTRSEIDW  IM+AG     N G  K + +G + D SPHLS  MLGDLDMMF+GPSVKDGLTLGAITEDPREDM+SEFT+TP+ +GSAT FEV
Sbjct:    3 PPKLAMRNQAVQAVGEKYFQVAL--------------------------------------------------------VDIGWKSFVIDKAYSTEGCLDGWEGTKDIGSPFGDGIYRKKSAVYGNGATGAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGEGESEEIFCQAKPWNFEVPLYAGWTAIAHVAVMFLTSVWILTKSGLVEGILDGSKLVGGKAVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKM-------QGGSPKHTKDNTLRTGER-AGVRPKIALGGDIEGQ-----------ATGGHNLS----SPGPVQSIPRATGAPGSKAATXXXXXXXXXXXXXXXLPG-----------------KP--GGXXXRSASA-----------------------------------------SEEE-------VSPAIRSSIGKG------HGKTRSEIDWGRIMDAG----DNDGTAKQYDDGDEDDDSPHLSSVMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV 501          
BLAST of mRNA_H-canaliculatus_F_contig1028.292.1 vs. uniprot
Match: A0A6H5L9G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G0_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 1.130e-74
Identity = 202/414 (48.79%), Postives = 236/414 (57.00%), Query Frame = 0
Query:  270 MFLASVWILGRSALVEGILDGSKLASGKTVTPRVVEFEQAVGRALATTEDPDYDVPGNKLYTGEQNIMIRPYPLPGSVKKVAKAAEALVSPLRNMSPTRSHARGKSKAAGLSRTSNVVDNNEGFTPKI-IGSDLNGEEGYMLNSGSTGSAAGYNESQGPPSPGPVRPIPKPLL---SKAAXXXXXXXXXXXXXXXXQP-------------GGKHASSEESEIRGTDGSKPTTGGGHARQSSRTTMMPK--MPSLGGFGRK----TXXXXXXXXXXXXXXXXXXXXGDVDSDEEGSSSSVIVLPVEGDGMGAGAAPGTRHGKTRSEIDWNSIMEAGGSGDGNTGVEKSHQEG-KGDGSPHLSPSMLGDLDMMFNGPSVKDGLTLGAITEDPREDMISEFTITPRKKGSATQFEV 659
            MFL SVWIL +S LVEGILDGSKL  GK VT        AVGRALATTEDPDYDV  NKLYTGE NIMIRPYPLPGSVKKVAKAAE LVSPLR M  +  H +  +   G S          G  P I +G+D+ G+           +  G+N S    SPGPV  IP+  +   SKAA XXXXXXXXXXXXXXX               GG+ AS+ E E+     S  ++G    R++    + P+  M S     R+                         GDV++D   S  +V   P       A    G  H KTRSEIDW  IM+AG     N G  KS+ +G + D SPHLS  MLGDLDMMF+GPSVKDGLTLGAITEDPREDM+SEFT+TP+ +GSAT FEV
Sbjct:    1 MFLTSVWILSKSGLVEGILDGSKLVDGKAVT--------AVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEVLVSPLRKMGGSPKHTKNNTLRTGESA---------GVRPNIALGADIEGQ-----------APGGHNLS----SPGPVESIPRAAVAPASKAATXXXXXXXXXXXXXXXXXXXXXXXXXXPGGEGGRSASASEEEVSPAIRSSGSSGRTLNRRAHAMGIKPQSSMTSHHIIRRRQITMVNRDHVSTSKYHNKGPWDRDAGDVETDS--SLGNVARSP-------ASVVSGKGHEKTRSEIDWGRIMDAG----HNDGTAKSYDDGDEDDDSPHLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKARGSATHFEV 369          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1028.292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1J1_ECTSI1.410e-19155.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L9G0_9PHAE1.130e-7448.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 279..659
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 258..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 204..257
NoneNo IPR availableTMHMMTMhelixcoord: 257..279
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 140..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1028contigH-canaliculatus_F_contig1028:6938..17987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1028.292.1mRNA_H-canaliculatus_F_contig1028.292.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1028 5946..19271 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1028.292.1 ID=prot_H-canaliculatus_F_contig1028.292.1|Name=mRNA_H-canaliculatus_F_contig1028.292.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=660bp
MVLGMTKKQNSKRPPKILARNHAVQAVGETYFRVALLGMAAASVLAIVAV
SIGSTRGMFEFRIDRCDCLLTSEAQNAVDEGQDCVFGQDMLGVNIGWKSF
VIDHAVSTEGCLDGWEGTTDIGTPFGDGIYKKKTEVYGNGATGAADACVG
LFVVSAAIAVIMYKTVKMSYAGPGSIYSIGLHNIAMLCLLLSIASAISVM
AFWGRVQGKLGNLSSSLAVTLFRATLDVCQDDWDTVGFPIDDEEFCEAAP
WTFDVPLYASWTAIAHVGIMFLASVWILGRSALVEGILDGSKLASGKTVT
PRVVEFEQAVGRALATTEDPDYDVPGNKLYTGEQNIMIRPYPLPGSVKKV
AKAAEALVSPLRNMSPTRSHARGKSKAAGLSRTSNVVDNNEGFTPKIIGS
DLNGEEGYMLNSGSTGSAAGYNESQGPPSPGPVRPIPKPLLSKAAAKAAR
KAAKKAAKKGPQPGGKHASSEESEIRGTDGSKPTTGGGHARQSSRTTMMP
KMPSLGGFGRKTKETENVESPGAGEGGDGEDGGDVDSDEEGSSSSVIVLP
VEGDGMGAGAAPGTRHGKTRSEIDWNSIMEAGGSGDGNTGVEKSHQEGKG
DGSPHLSPSMLGDLDMMFNGPSVKDGLTLGAITEDPREDMISEFTITPRK
KGSATQFEV*
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