prot_H-canaliculatus_F_contig102.218.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig102.218.1
Unique Nameprot_H-canaliculatus_F_contig102.218.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length986
Homology
BLAST of mRNA_H-canaliculatus_F_contig102.218.1 vs. uniprot
Match: A0A6H5KHP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP2_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 1.140e-162
Identity = 497/1016 (48.92%), Postives = 557/1016 (54.82%), Query Frame = 0
Query:    1 MTRGCGILVVAAFAATATWPSPSPCRSSSIAWGFLTTTLPSTASSPNAANRRTLHSHRTGRGGSWSAAAKAAAAGERRESICDSSGRALHMIAAAEDEGSEVGLGSRRQVLLSSSPCRPFCNSNCRIGRRTLGLAGANYGGGDGXXXXLGRGGLDPESVARAREAAKNDDYDWFMEFIEGGEDAGDDGTGIDPEDSSRGSATGVLNNRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYDADLVDGSATXXXXXXXXXXXXXTGRGFQPPTNG-NRGDERRRGQRPSAAADSAYDYDLDDEYDREPGRGGWDYDPGLSAGIGERRRDVQLDKVRAKTKPASMRLPLEDDRD-MEAATRERTEAQGXXXXXXXXTAVKFEPVDSEKARLLIEGLGYTEPEVACMDPDMADLAIERSIRRPGSGMPSDWVAVGVPPPPNTRAVATEPTTPLSSSSSSFSSQTYFGEGA---AASPGAGAFGGNGAAGGVDGGALDLDAILGDGFDDD------YEXXXXXXXXXXXXREGTRRLDRSGYPSGDWTGDREQGRRGPKTREEDRRRDSAYSQDGGGRRQGREGRRGDGGNGYGYDDDNDARGSDSYYYEDEGAPQNGGRARGYAREDGA--DIRDGVRRGRRTDAGXXXXXXXXXXXXXXXXEPVISAAERYEREVFGGLGGEAAGGDGGDGRG---------RSDEDDDAKLWTGVGPDGPWPTMEEFTKLLREETEVRLGLVGPWAAEVVSVENRFRLQAYEKWLEVLDKGIGATLEEAGVFDAAFSTDDEDYDDGYDDQRRGRGGPGGSGFSPGTSNNNLYDNYTNYGYRTSGD--GGSRRDDGRGGXXXXDGYGYDPQGRQDERGFDYDDRYGGEYDSYRQRPRRPRA------PGRQKFDVGSFLRSGAQSIMQPGVGMEEKAAEFERRYPGRTRSNALDFGDEDDANTVDSSVRSNRDEGFEGRRSQRARREVE-EGDGEPRGSRRRRREDRGRWSQAGYQDEEDDYEY 985
            MTRG G+L+ AA A TATWPS +P RS+S AWGFL       A++P +AN                                             +   S     SR ++LL  S             R T         GG  XXXX    GLD ESVARAREAAK DDYDWFMEFI           G+D E+              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXX GRGFQP + G     E RR +RPS A D+AYDYDLD+EYD+EPGRGGWDYDPGLSAGIG RRRDVQ+DKVRAK K ASMR PLEDD+  MEA    R E  G         A +FEPV S+KA+ L E LGYTE EVAC+DPDMADLAIER+IRRP SGMP DWVAVG+PP                          YFG GA   A   G  + G +   G VD G+LDLDAILGDG+D +        XXXXXXXXXXXX                  G  + GRRG   REED                                     RG D             GR RG    DG     R   RR RR                    +  IS AERYER++FG LGGE       DG+G          +DE+D  KLWTGVGPDGPWPTMEEFTKLLREETEVRL LVGPWAAEVV++ENRFRLQAYEKWLEVLDKGIG TLEEAGVFDAAF TDD+DYDD  +   R R     SG       NNLYD+YT+YGY    D  GG R              GYD +G++DERGFDYDDR  G   + RQR RR R       P R+KFDVG+FLRSGAQ+IMQPG GMEEKAA+FERRYPGRT S   D GD++ A+      R+   + F GRR  RARRE + + D + RG RR R  DRG  S  GY DEED Y+Y
Sbjct:    1 MTRGRGVLLAAAVATTATWPSSTPGRSTSSAWGFL-------AAAPRSAN-------------------------------------------CLDANKSTSSTSSRARLLLLPS-------------RAT---------GGXXXXXXXXXXGLDAESVARAREAAKKDDYDWFMEFI-----------GVDEEEXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGFQPLSGGVGTTGEMRRERRPSPA-DTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKAKSASMRRPLEDDQQSMEAEQEIRQEFAGR--------AAEFEPVGSKKAKALTEDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXX--------XXYFGGGATTAAEDVGRTSRGSSDRGGVVDDGSLDLDAILGDGYDYNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGAPQMGRRGMDDREEDF----------------------------------VLRGRDE------------GRGRGRREMDGGVGGPRGQSRRPRRK-------------------KKNISPAERYERQIFGELGGE-------DGKGAGNRRPLWDENDEEDGGKLWTGVGPDGPWPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGETLEEAGVFDAAF-TDDDDYDDDGNIDGRNRAARRRSGT------NNLYDDYTSYGYGQDEDVLGGGRS-------------GYDVEGQRDERGFDYDDRLKGGEGNRRQRQRRQRGWDEDTEPSRRKFDVGTFLRSGAQNIMQPGAGMEEKAAQFERRYPGRTGS-YYDDGDDNAASAGSPGGRNTGHDSF-GRRG-RARREGDYDYDDDVRGRRRGRGGDRG-GSSPGYVDEED-YDY 816          
BLAST of mRNA_H-canaliculatus_F_contig102.218.1 vs. uniprot
Match: D7G0C6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C6_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 7.880e-117
Identity = 279/580 (48.10%), Postives = 317/580 (54.66%), Query Frame = 0
Query:  286 RGQRPSAAADSAYDYDLDDEYDREPGRGGWDYDPGLSAGIGERRRDVQLDKVRAKTKPASMRLPLEDDRDMEAATRERTEAQGXXXXXXXXTAVKFEPVDSEKARLLIEGLGYTEPEVACMDPDMADLAIERSIRRPGSGMPSDWVAVGVPPPPNTRAVATEPTTPLSSSSSSFSSQTYFGEGAAASPGAGAFGGNGAAGGVDGGALDLDAILGDGFDDDYEXXXXXXXXXXXXREGTRRLDRSGYPSGDWTGDREQGRRGPKTREEDRRRDSAYSQDGGGRRQGREGRRGDGGNGYGYDDDNDARGSDSYYYEDEGAPQNGGRARGYAREDGADIR---DGVRRGRRTDAGXXXXXXXXXXXXXXXXEPVISAAERYEREVFGGLGGEAAGGDGGDGRG---------RSDEDDDAKLWTGVGPDGPWPTMEEFTKLLREETEVRLGLVGPWAAEVVSVENRFRLQAYEKWLEVLDKGIGATLEEAGVFDAAFSTDDEDYDDGYDDQRRGRGGPGGSGFSPGTSNNNLYDNYTNYGYRTSGDGGSRRDDGRGGXXXXDGYGYDPQGRQDERGFDYDDRY 853
            R +R +++AD+AYDYDLD+EYD+EPGRGGWDYDPGLSAGIG RRRDVQ+DKVRAKTK ASMR PLEDD+    A +E+  A           AV+FEPV S+KA+ LIE LGYTE EVAC+DPDMADLAIER+IRRP SGMP DWVAVG+P                              +    S G+G  GG      VD G+LDLDAILGDG+D                                                        Y+  GG RR+G                              E AP  G R   Y RE+    R   +G  RGRR   G                   IS AERYER++FG LGGE       DG+G           DE+D+ KLWTGVGPDGPWPTMEEFTKLLREETEVRL LVGPWAAEVV++ENRFRLQAYEKWLEVLDKGIG TLEEAGVFDAAF TDD+DYDD  +   R R     SG       NNLYD+YT+YGY    D    R  GR G        YD QG++DERGFDYDDRY
Sbjct:    2 RRERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQQSMEAEQEQEFA---------GRAVEFEPVGSKKAKALIEDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDVVRTSRGSGDRGGV-----VDDGSLDLDAILGDGYD--------------------------------------------------------YNGVGGRRRKGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-APHLG-RGGMYDREEDLFPRGRDEGRGRGRREMDGGVGGPRGQSKRPRRKERTEISPAERYERQIFGELGGE-------DGKGAGNRRALWDEDDEEDEGKLWTGVGPDGPWPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGETLEEAGVFDAAF-TDDDDYDDDGNTDGRSRTARRRSGT------NNLYDDYTSYGYGQDAD---VRGAGRSG--------YDVQGQRDERGFDYDDRY 484          
BLAST of mRNA_H-canaliculatus_F_contig102.218.1 vs. uniprot
Match: A0A7S2LJX8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LJX8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 8.780e-5
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query:  696 VGPDGP-WPTMEEFTKLLREETEVRLGLVGPWAAEVVSVENRFRLQAYEKWLEVLDKGIGA--TLEEAGV 762
            + P+G  WP +  F + LR+E+E+RL ++GP  A+ +  E ++RL  Y+KWL +L+ G+G   T E + V
Sbjct:   97 IEPEGSLWPNLPTFKQFLRQESELRLMVLGPGFADSIRDEAQWRLNLYQKWLMLLEDGVGEDRTFENSSV 166          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig102.218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHP2_9PHAE1.140e-16248.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0C6_ECTSI7.880e-11748.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2LJX8_9STRA8.780e-538.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..985
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.627

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig102contigH-canaliculatus_F_contig102:38995..55874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig102.218.1mRNA_H-canaliculatus_F_contig102.218.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig102 38966..56953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig102.218.1 ID=prot_H-canaliculatus_F_contig102.218.1|Name=mRNA_H-canaliculatus_F_contig102.218.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=986bp
MTRGCGILVVAAFAATATWPSPSPCRSSSIAWGFLTTTLPSTASSPNAAN
RRTLHSHRTGRGGSWSAAAKAAAAGERRESICDSSGRALHMIAAAEDEGS
EVGLGSRRQVLLSSSPCRPFCNSNCRIGRRTLGLAGANYGGGDGGDGGLG
RGGLDPESVARAREAAKNDDYDWFMEFIEGGEDAGDDGTGIDPEDSSRGS
ATGVLNNRGGGSSGGVGGRQRSTAQGDRRNDNGRDSSSSSSSGYDADLVD
GSATGGGVAPQRRRPPPTGRGFQPPTNGNRGDERRRGQRPSAAADSAYDY
DLDDEYDREPGRGGWDYDPGLSAGIGERRRDVQLDKVRAKTKPASMRLPL
EDDRDMEAATRERTEAQGGGAAAAAATAVKFEPVDSEKARLLIEGLGYTE
PEVACMDPDMADLAIERSIRRPGSGMPSDWVAVGVPPPPNTRAVATEPTT
PLSSSSSSFSSQTYFGEGAAASPGAGAFGGNGAAGGVDGGALDLDAILGD
GFDDDYEETGGGGGGNNKRREGTRRLDRSGYPSGDWTGDREQGRRGPKTR
EEDRRRDSAYSQDGGGRRQGREGRRGDGGNGYGYDDDNDARGSDSYYYED
EGAPQNGGRARGYAREDGADIRDGVRRGRRTDAGGGGQPAGRRRRRKEEK
EPVISAAERYEREVFGGLGGEAAGGDGGDGRGRSDEDDDAKLWTGVGPDG
PWPTMEEFTKLLREETEVRLGLVGPWAAEVVSVENRFRLQAYEKWLEVLD
KGIGATLEEAGVFDAAFSTDDEDYDDGYDDQRRGRGGPGGSGFSPGTSNN
NLYDNYTNYGYRTSGDGGSRRDDGRGGGRGGDGYGYDPQGRQDERGFDYD
DRYGGEYDSYRQRPRRPRAPGRQKFDVGSFLRSGAQSIMQPGVGMEEKAA
EFERRYPGRTRSNALDFGDEDDANTVDSSVRSNRDEGFEGRRSQRARREV
EEGDGEPRGSRRRRREDRGRWSQAGYQDEEDDYEY*
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