prot_H-canaliculatus_F_contig1012.146.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1012.146.1
Unique Nameprot_H-canaliculatus_F_contig1012.146.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length112
Homology
BLAST of mRNA_H-canaliculatus_F_contig1012.146.1 vs. uniprot
Match: D7FM73_ECTSI (Fibronectin type-III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM73_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 4.290e-53
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0
Query:    1 MEVPQLQFKGCELDAITLSWQRTGDAGYKLEFREILVPDWAGCRSETVAPASSSSPETTITVTDLNPSSSYLFRLYTVAADGREVGPGPEVAFDTEVVSCAPTNKPCCIIS 111
            M VPQLQFK CELD+ITLSW+R    GYKLEFREILV DWAGCRS  +AP  SSS E +  VT LNPSSSY+FRLYTV A G+EVGPGPE+AFDTEVVSCAPTNK CC IS
Sbjct:    1 MAVPQLQFKDCELDSITLSWERAEGTGYKLEFREILVSDWAGCRSIAIAPEQSSSTEMSTKVTGLNPSSSYIFRLYTVTAAGQEVGPGPEIAFDTEVVSCAPTNKSCCTIS 111          
BLAST of mRNA_H-canaliculatus_F_contig1012.146.1 vs. uniprot
Match: A0A835YPU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU1_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 9.850e-23
Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    2 EVPQLQFKGCELDAITLSWQRTGDAGYKLEFREILVPDWAGCRSETVAPASSSSPETTITVTDLNPSSSYLFRLYTVAADGREVGPGPEVAFDTEVVSCAPTNKPCC 108
            ++P L+F+ C+L+++TL W       YKLEFR++    W    S  + P  S +   T+ VTDL PS +Y+FRL+ + A G+  GPGP+ AFDTEVVSC PT++  C
Sbjct:    7 KLPVLRFQSCDLESLTLEWAGEPGVEYKLEFRDVNRKGWDSAFSLRIPP--SQTGHETVKVTDLLPSMTYIFRLWIMGAGGKLEGPGPDTAFDTEVVSCTPTSRSVC 111          
BLAST of mRNA_H-canaliculatus_F_contig1012.146.1 vs. uniprot
Match: A0A2R5GV16_9STRA (Fibronectin type-III domain-containing protein 3A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV16_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 5.760e-5
Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   15 AITLSWQRT-GDAGYKLEFREILVPD-WAGCRSETVAPASSSSPETTITVTDLNPSSSYLFRLYTVAADGREVGPGPEVAFDTEVVSCAPTNKPCCIIS 111
            ++ + WQ+  G   YKL  R+I  PD W   +  T+  +     ET +T+ DL P+S+Y FR+  V ++G E     ++  DT V +C P  K  C+IS
Sbjct:   18 SVDIKWQKVDGATSYKLYRRKI--PDTWETAKVTTIGGS-----ETKVTLEDLEPTSTYQFRIAAVTSEG-EGAQSEDLTIDTAVANCTPKKK--CVIS 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1012.146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FM73_ECTSI4.290e-5375.68Fibronectin type-III domain-containing protein n=2... [more]
A0A835YPU1_9STRA9.850e-2343.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2R5GV16_9STRA5.760e-534.34Fibronectin type-III domain-containing protein 3A ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3..108
e-value: 1.6E-8
score: 36.8
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 4..82
e-value: 5.3E-7
score: 29.9
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 3..98
score: 10.399
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 5..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1012contigH-canaliculatus_F_contig1012:7927..10357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1012.146.1mRNA_H-canaliculatus_F_contig1012.146.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1012 6991..10357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1012.146.1 ID=prot_H-canaliculatus_F_contig1012.146.1|Name=mRNA_H-canaliculatus_F_contig1012.146.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=112bp
MEVPQLQFKGCELDAITLSWQRTGDAGYKLEFREILVPDWAGCRSETVAP
ASSSSPETTITVTDLNPSSSYLFRLYTVAADGREVGPGPEVAFDTEVVSC
APTNKPCCIIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036116FN3_sf
IPR003961FN3_dom
IPR013783Ig-like_fold