prot_H-canaliculatus_F_contig101.128.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig101.128.1
Unique Nameprot_H-canaliculatus_F_contig101.128.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length459
Homology
BLAST of mRNA_H-canaliculatus_F_contig101.128.1 vs. uniprot
Match: A0A6H5JLK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK5_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 1.300e-109
Identity = 231/491 (47.05%), Postives = 270/491 (54.99%), Query Frame = 0
Query:   14 MSAFQTFAAPPGRHQHQHWQQVSPFSSPTLVGSAASLSCPRRDHLRRRRHLGSCCRQSGAHGAIHPLTFGAKYGREGRSAI--------EGHPSLLGCLASPTSTPEESSGAAPGSAGTS--GSEETAESGGSAA------VGSDARRLGGPTEPGTEGVRGRPVPGWDVGYEATGPLDGRVSDRSRGGXXXXXXXXXXXXXXXXXXXXGGPTQGRLRLKWGFDLDVPVPSELEALVKGPWDPQGDVWARQLDIAAQVIERSGGVVFMEQLAPVLNPREGPPQWFRENVVASGGGY-------------GGFADKSKEPTGLDNTAQTLED--------------------YETDQLNAEGVKGFSTTPEVLQFEEVPKLLKALPKMMPDQGPKVVRDFFQRTALSGLALFLSMWLLLGQLIFHSSPTWLFTGPAYLVWVGLDDTLRRSRDTSARQRDRWRGQWADVCRGDGEAMWRKRAAARSRARRLRD 455
            MSA + F + P   QH  W    P  SP +   A ++       +   R   SCCR+SG  G    L  G  +  E RSA         E +  L   LAS  +       A+ G+ GT+  G    A SG   A      VGS  R  G   E GT    GRP  G D   +   P     S RSR                           GRLRLKWG DLD+PVP  LEALVKGPWDPQGD+W RQLD+AAQVI RSGGVVFMEQLAP+LNPREGP +W+R    A G  Y             GG A   +    L+ + +   D                     E D  + E   G +  PEVLQFEEVP+LL++LPKM+PDQGPKVV++FFQRTALSGLALFLSM L+LGQLIF+S P WL TGPAYLVWVGLDDTLRRSR+ SA+QRD+WR QWADVCRGDG+A+WRKRAAAR  ARRL D
Sbjct:    1 MSALEAFVSWPV--QHHRWLPYRPLPSPAISALATNVGGDNGAAVGLSRRT-SCCRESGGRGTDQVL-LGLWFSDENRSASFWRKRRRQEPYGRLWLPLASSATXXXXXXXASIGNDGTAAKGDGAPASSGNEVASDESRPVGSGGRMAGDMFEFGTNRRTGRPALGRDEANKTARPSKDESSGRSR---------------------RKSSAPGRLRLKWGVDLDIPVPVALEALVKGPWDPQGDMWERQLDMAAQVISRSGGVVFMEQLAPILNPREGPREWYRVCADAGGDFYEKGDKSGISVDAVGGEALVLRVLLDLNGSPEVTSDGDILYVFPGFARGKRGREGNIEADYRSEESETGSTAAPEVLQFEEVPRLLESLPKMIPDQGPKVVKEFFQRTALSGLALFLSMCLVLGQLIFNSWPIWLATGPAYLVWVGLDDTLRRSRNRSAKQRDQWREQWADVCRGDGDAIWRKRAAARVMARRLDD 466          
BLAST of mRNA_H-canaliculatus_F_contig101.128.1 vs. uniprot
Match: A0A6H5K1U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U7_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 4.790e-84
Identity = 157/284 (55.28%), Postives = 176/284 (61.97%), Query Frame = 0
Query:  224 VPVPSELEALVKGPWDPQGDVWARQLDIAAQVIERSGGVVFMEQLAPVLNPREGPPQWFRENVVASGG----GYG-------------------------------------------GFADKSK--EPTGLDNTAQTLEDYETDQLNAEGV-KGFSTTPEVLQFEEVPKLLKALPKMMPDQGPKVVRDFFQRTALSGLALFLSMWLLLGQLIFHSSPTWLFTGPAYLVWVGLDDTLRRSRDTSARQRDRWRGQWADVCRGDGEAMWRKRAAARSRARRLRDEG 457
            + VP  LE LV+GPWDPQ D W RQLD+AAQV++RSGGVVFMEQLAPVLNPREGPP+W+RE+    GG    GYG                                           GFA K +  E       A TLE +E +Q    G  K F+ TPEVLQFEEVP LL  LPKM PDQGPK       RTALSGLALFLS  L+L QLIF S P WL  GPAYL WV LDD+LRRSR  SA+QRD WRGQWADVCRGDG+ +WRKR AAR RAR+LR +G
Sbjct:    8 IHVPLALEELVRGPWDPQRDTWRRQLDMAAQVVQRSGGVVFMEQLAPVLNPREGPPEWYRESATGGGGRGAAGYGKNGATDGISIEAVGGEALVLRLLFELNGAPEVTDDGDILYVFPGFAAKGEACEGRAAAGEAPTLEAFEAEQRGGGGEEKEFTATPEVLQFEEVPGLLDVLPKM-PDQGPK-------RTALSGLALFLSTCLVLEQLIFRSWPAWLAAGPAYLAWVALDDSLRRSRGKSAKQRDVWRGQWADVCRGDGDPVWRKRVAARLRARKLRGDG 283          
BLAST of mRNA_H-canaliculatus_F_contig101.128.1 vs. uniprot
Match: D7FXE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE6_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 3.060e-69
Identity = 145/292 (49.66%), Postives = 167/292 (57.19%), Query Frame = 0
Query:  139 VGSDARRLGGPTEPGTEGVRGRPVPGWDVGYEATGPLDGRVSDRSRGGXXXXXXXXXXXXXXXXXXXXGGPTQGRLRLKWGFDLDVPVPSELEALVKGPWDPQGDVWARQLDIAAQVIERSGGVVFMEQLAPVLNPREGPPQWFRENVVASGGGY--GGFADKSKEPTG-----------LDNTAQTLED--------------------YETDQLNAEGVKGFSTTPEVLQFEEVPKLLKALPKMMPDQGPKVVRDFFQRTALSGLALFLSMWLLLGQLIFHSSPTWLFTG 397
            VGS  R  G   E GT    GRP  G D  Y+         S RSR                           GRLRLKWG DLD+PVP  LEALVKGPWDPQGD+W RQLD+AAQVI RSGGVVFMEQLAP+LNPREGPP+W+R    A GG Y  G  +D S +  G           L+ + +   D                     E D  + E   G +  PEVLQFEEVP+LL+ALPK++PDQGPKVV++ FQRTALSGLALFLSM L+LGQLIF+S P WL TG
Sbjct:  101 VGSGGRVAGDMFEFGTNRRTGRPALGRDEAYKTARSPKDESSGRSR---------------------RRSSAPGRLRLKWGVDLDIPVPVALEALVKGPWDPQGDMWKRQLDMAAQVISRSGGVVFMEQLAPILNPREGPPEWYRVCADAGGGFYEKGDKSDISVDAVGGEALVLRVLLDLNGSPEVTSDGDILYVFPGFARGKRGREGSIEADYHSEESETGSTAAPEVLQFEEVPRLLEALPKIIPDQGPKVVKELFQRTALSGLALFLSMCLVLGQLIFNSWPIWLATG 371          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig101.128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLK5_9PHAE1.300e-10947.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1U7_9PHAE4.790e-8455.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXE6_ECTSI3.060e-6949.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 388..392
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 368..387
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 411..458
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 393..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig101contigH-canaliculatus_F_contig101:24091..30072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig101.128.1mRNA_H-canaliculatus_F_contig101.128.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig101 23268..31249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig101.128.1 ID=prot_H-canaliculatus_F_contig101.128.1|Name=mRNA_H-canaliculatus_F_contig101.128.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=459bp
MLVPSATPGPPWAMSAFQTFAAPPGRHQHQHWQQVSPFSSPTLVGSAASL
SCPRRDHLRRRRHLGSCCRQSGAHGAIHPLTFGAKYGREGRSAIEGHPSL
LGCLASPTSTPEESSGAAPGSAGTSGSEETAESGGSAAVGSDARRLGGPT
EPGTEGVRGRPVPGWDVGYEATGPLDGRVSDRSRGGGGGGGNGSGEGSSS
GRRRKEGGPTQGRLRLKWGFDLDVPVPSELEALVKGPWDPQGDVWARQLD
IAAQVIERSGGVVFMEQLAPVLNPREGPPQWFRENVVASGGGYGGFADKS
KEPTGLDNTAQTLEDYETDQLNAEGVKGFSTTPEVLQFEEVPKLLKALPK
MMPDQGPKVVRDFFQRTALSGLALFLSMWLLLGQLIFHSSPTWLFTGPAY
LVWVGLDDTLRRSRDTSARQRDRWRGQWADVCRGDGEAMWRKRAAARSRA
RRLRDEGV*
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