mRNA_H-canaliculatus_F_contig154.3990.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE) HSP 1 Score: 328 bits (842), Expect = 9.890e-105 Identity = 190/286 (66.43%), Postives = 219/286 (76.57%), Query Frame = 3
Query: 261 CLLVALGVNSVDALL-PVAGRGNPS------VTDALQKLTKRGCGRSSSGSNEMDQDAVRAHLSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAAS 1097
CLLV +G ++ ++LL +AG P A T++G + NE+ QD L+ PLLELITPDGCASSS S+ SSL+ NIQ+A AGGVSLVQLRDYKS AKSKA+LA R+ +A +GRALFVVNGEP+ RA+GADGVHLPERM+ LV LRG G WPR+VGCSVHSV AAVEAARLGADYVQVGTMFATQSHPGK PEGVGMLNDV+R+LQ EG VLV+GVGGIDASNCG VV AGGDGVAAIRCLCSSSDAE +AR I++ +R NSA S
Sbjct: 39 CLLVLVGASTGESLLLSMAGSPYPRGCTTACAAGAAASPTRKGGAPLNGLGNEVAQDDATP-LAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGADGVHLPERMMDRLVGLRGQGE--WPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMR--NSAGS 319
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.260e-45 Identity = 111/213 (52.11%), Postives = 141/213 (66.20%), Query Frame = 3
Query: 435 PLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGR-ALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRL-QAEGFGD-----VLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEA 1052
P+LELITPDG A+ PS L I+ A +GGV LVQ+RD SSA+SK LA +L+ V+NG +A A GA GVHLPER++ + R A +VGCSVHSV AAV AARLGADY+QVGTMFATQ+HPGKVPEG +L ++ L QA G+ VL++GVGGI+ +NC +V++AGGDGVAAIR LC + ++ A
Sbjct: 42 PVLELITPDGSAAQ-PSTH--LAQKIRAAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLNGGVDAALACGAHGVHLPERLLPEVTRAREA-----LAVVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRA 246
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2H5YM77_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT) HSP 1 Score: 141 bits (355), Expect = 5.110e-35 Identity = 91/194 (46.91%), Postives = 117/194 (60.31%), Query Frame = 3
Query: 495 SLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLR 1076
SL A + RA AGGV +VQLR+ A LA L ATEGR+L VVN + A+GADG+HLPER + A R G EG RLVG SVHS+ AV AA GADY+ VG+++AT+SHPG P G+G+L +V R+ + V+ +GGI A +VV+AG GVA I + +AE AR + R LR
Sbjct: 13 SLTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGRSLLVVNDRADVALAAGADGLHLPERGLPVAAARRLLG-EG--RLVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVS------LPVLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALR 197
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A8J2X006_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X006_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.480e-30 Identity = 100/232 (43.10%), Postives = 128/232 (55.17%), Query Frame = 3
Query: 423 HLSLPLLELITPDGCASSSPSDQSSLIANIQRAAA-GGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAASAASAST 1115
HL L +TP G A++ D+ + + + RAAA GG SLVQLRD +S AA + A +G VV E HLPER R P +GCS HSV A + AA LGADYVQ+GTMFATQ+HPGK+PEG G+ + +R L E L+IGVGG+DA+N K++EAG DGVA IR + + D E AR I R L G + S A+ +T
Sbjct: 50 HLPRRPLVFVTPPGWAAA---DRRADLERVARAAAKGGASLVQLRDADASRDELQSAAAAVRDALQGTDCSVVINGVE----------HLPERKWRAATE-----RPNGP--LGCSAHSVEAVLAAAALGADYVQLGTMFATQTHPGKIPEGPGLATECRRALD-EREAPPLLIGVGGVDATNAAKLIEAGCDGVAVIRGISDARDPEAAARAICRALAGAGTRISKAAQNT 260
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK) HSP 1 Score: 128 bits (322), Expect = 2.700e-29 Identity = 86/210 (40.95%), Postives = 121/210 (57.62%), Query Frame = 3
Query: 435 PLLELITPDGCASSSPSDQSS--LIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATE-GRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEG--------VGMLNDVKRRLQAEGFGDVL--VIGVGGIDASNCGKVVEAGGDGVAAIRCLC 1025
P L LITP+G + S+++ +++ I A GGVSLVQLRD ++ + A + R+ + A+F+VNG+ + A ADGVHLPE + + + + ++GCSVHS AA+ A + ADY+ VGTMF T SHPGKVPEG + ML+ + + G + L V GVGGID NC +V++ GGDGVA I LC
Sbjct: 4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNGDLDVAIACKADGVHLPEAQVQDFI--NSYKNKKFNGVLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLC 211
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2H5YGE0_9BACT (Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT) HSP 1 Score: 122 bits (307), Expect = 2.940e-28 Identity = 90/219 (41.10%), Postives = 119/219 (54.34%), Query Frame = 3
Query: 417 RAHLSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGL 1073
R LP L L+T D + P Q++ RA AGGV++VQLR+ A+ LAA L +A GRAL VVN + A+GADGVHLPE + A R G RLVG SVHSV AAV A GADY+ VG ++ T+SHP G G+L+ V+R ++ V V+ +GG+ A+ + + AG GVA I + S D E AR + L
Sbjct: 6 RPFFPLPCLMLVT-DRSLAPLPLPQAAA-----RAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGRALLVVNDRADVALAAGADGVHLPEDGLPVAKARRLVGPA---RLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAVR------VPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGLRSAL 209
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2W1B5W2_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1B5W2_9CHLR) HSP 1 Score: 122 bits (306), Expect = 3.350e-28 Identity = 85/219 (38.81%), Postives = 117/219 (53.42%), Query Frame = 3
Query: 426 LSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGE 1082
L P+L L+T + P L+ + +A AGGV+LVQLRD A+ LA L T+GRAL VN + AS ADGV LPE + A R AG L+G SVHS+ A+EAA GAD VQVGT+F +Q+HP GVG++ + + A V+G+GGI N +V+E G GVA +R + +S + E + + R + E
Sbjct: 3 LPRPILCLVTDASVLGARP-----LVEAVDKAVAGGVNLVQLRDRSLPARELLALACELRIVTQGRALLFVNDRIDVALASEADGVQLPEAGLPVAEARRIAGDR---LLIGRSVHSLQTAIEAAEQGADLVQVGTVFPSQTHPELEASGVGLVTVLASCVSAP------VVGIGGITGGNAREVIEGGASGVAVVRAILASEEPEAASATLKRVIEAE 207
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A7X3VB43_9CHLR (Thiamine-phosphate synthase n=2 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3VB43_9CHLR) HSP 1 Score: 121 bits (304), Expect = 7.170e-28 Identity = 85/221 (38.46%), Postives = 118/221 (53.39%), Query Frame = 3
Query: 414 VRAHLSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLR 1076
++ L LP L L+T G +S ++ + A AGGV +VQLRD A LA L S TEGRAL +VN + SGADGV L E + A R G E L+G SVHSV AV+A GAD++ +GT+F T SHPG G+ ++ DV R+ + VIG+GGI SN +VE+G G A I + ++D + + +I+ +R
Sbjct: 1 MKPKLPLPCLCLVTDRGRTAS-----DDIVNTARGAVAGGVGMVQLRDKDCPAAEMLSLARELRSVTEGRALLIVNDRVDIALLSGADGVQLGENGLDAASARRLVGSE---MLIGRSVHSVEGAVKAESSGADFLVLGTIFETASHPGADTGGLKLVRDVTDRI------GIPVIGIGGISKSNVAGLVESGAAGAAVITAVSMAADPKAASLNILEAMR 207
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2N0KGQ3_9CHLR (Thiamine-phosphate synthase n=1 Tax=SAR202 cluster bacterium Casp-Chloro-G3 TaxID=1926605 RepID=A0A2N0KGQ3_9CHLR) HSP 1 Score: 118 bits (296), Expect = 6.650e-27 Identity = 78/205 (38.05%), Postives = 114/205 (55.61%), Query Frame = 3
Query: 486 DQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAASA 1100
D+++L+A I A +GGV LVQLR+ ELA R+ A A+ ++N + A A+GV L E + + A + G + L+G SVHS+ A++AA GAD++ VGTMFA++SHPG+ P G ++ + R FG +GGIDASN G V++AG GVA I + +S + AR I R + + AA A
Sbjct: 11 DEATLVARIADAVSGGVDLVQLREKDLPGGPLLELAQRIREAISDSAMLIINERVDVAAAIAANGVQLGEEALPTIEARKILGHD---TLIGRSVHSLEGALQAAEQGADFLLVGTMFASRSHPGEEPAGPALVRQITVRCSLPLFG------IGGIDASNAGHVMDAGASGVAVITSILASPSPKEAARQIKRAIVASSLAARA 206
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2E7PCV5_9CHLR (Thiamine-phosphate synthase n=6 Tax=Chloroflexi TaxID=200795 RepID=A0A2E7PCV5_9CHLR) HSP 1 Score: 118 bits (296), Expect = 7.380e-27 Identity = 78/216 (36.11%), Postives = 117/216 (54.17%), Query Frame = 3
Query: 426 LSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGL 1073
L P L L+T G A Q L+ + +A AGGV LVQLRD + +LAA+L+ A +GRA +VN + A+GA GV + E + G + +G SVHS AA+ A + GAD++ VGTM+A+ SHPG+ P G G++ D+ + + +IG+GG+ N G++VEAG GVA I + ++ D + A + + L
Sbjct: 5 LPKPCLCLVTDPGIA------QKDLVERVAQAVAGGVDLVQLRDKEMPGGQLLDLAAQLLKAIDGRAKLLVNERADVAHAAGAHGVQIGEEGLPVSAVRNIVGDHSF---IGRSVHSSSAALAAEKEGADFLVVGTMYASSSHPGEEPAGPGLMRDISGTCR------LPLIGIGGVTPENAGELVEAGASGVAVITNILAAPDPKAAAAKLKQSL 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig154.3990.1 >prot_H-canaliculatus_F_contig154.3990.1 ID=prot_H-canaliculatus_F_contig154.3990.1|Name=mRNA_H-canaliculatus_F_contig154.3990.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=331bp MVTFPHRQPSAAASAPGTRRRERRCPPSTSLLHSFLRACLLVALGVNSVDback to top mRNA from alignment at H-canaliculatus_F_contig154:10781..13240+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig154.3990.1 ID=mRNA_H-canaliculatus_F_contig154.3990.1|Name=mRNA_H-canaliculatus_F_contig154.3990.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2460bp|location=Sequence derived from alignment at H-canaliculatus_F_contig154:10781..13240+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig154:10781..13240+ >mRNA_H-canaliculatus_F_contig154.3990.1 ID=mRNA_H-canaliculatus_F_contig154.3990.1|Name=mRNA_H-canaliculatus_F_contig154.3990.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1986bp|location=Sequence derived from alignment at H-canaliculatus_F_contig154:10781..13240+ (Hapterophycus canaliculatus Oshoro5f female)back to top |