mRNA_H-canaliculatus_F_contig154.3990.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig154.3990.1
Unique NamemRNA_H-canaliculatus_F_contig154.3990.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 9.890e-105
Identity = 190/286 (66.43%), Postives = 219/286 (76.57%), Query Frame = 3
Query:  261 CLLVALGVNSVDALL-PVAGRGNPS------VTDALQKLTKRGCGRSSSGSNEMDQDAVRAHLSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAAS 1097
            CLLV +G ++ ++LL  +AG   P          A    T++G    +   NE+ QD     L+ PLLELITPDGCASSS S+ SSL+ NIQ+A AGGVSLVQLRDYKS AKSKA+LA R+ +A +GRALFVVNGEP+  RA+GADGVHLPERM+  LV LRG G   WPR+VGCSVHSV AAVEAARLGADYVQVGTMFATQSHPGK PEGVGMLNDV+R+LQ EG   VLV+GVGGIDASNCG VV AGGDGVAAIRCLCSSSDAE +AR I++ +R  NSA S
Sbjct:   39 CLLVLVGASTGESLLLSMAGSPYPRGCTTACAAGAAASPTRKGGAPLNGLGNEVAQDDATP-LAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGADGVHLPERMMDRLVGLRGQGE--WPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMR--NSAGS 319          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.260e-45
Identity = 111/213 (52.11%), Postives = 141/213 (66.20%), Query Frame = 3
Query:  435 PLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGR-ALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRL-QAEGFGD-----VLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEA 1052
            P+LELITPDG A+  PS    L   I+ A +GGV LVQ+RD  SSA+SK  LA +L+          V+NG  +A  A GA GVHLPER++  +   R A       +VGCSVHSV AAV AARLGADY+QVGTMFATQ+HPGKVPEG  +L  ++  L QA   G+     VL++GVGGI+ +NC +V++AGGDGVAAIR LC +  ++  A
Sbjct:   42 PVLELITPDGSAAQ-PSTH--LAQKIRAAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLNGGVDAALACGAHGVHLPERLLPEVTRAREA-----LAVVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRA 246          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2H5YM77_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT)

HSP 1 Score: 141 bits (355), Expect = 5.110e-35
Identity = 91/194 (46.91%), Postives = 117/194 (60.31%), Query Frame = 3
Query:  495 SLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLR 1076
            SL A + RA AGGV +VQLR+    A     LA  L  ATEGR+L VVN   +   A+GADG+HLPER +    A R  G EG  RLVG SVHS+  AV AA  GADY+ VG+++AT+SHPG  P G+G+L +V  R+       + V+ +GGI A    +VV+AG  GVA I  +    +AE  AR + R LR
Sbjct:   13 SLTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGRSLLVVNDRADVALAAGADGLHLPERGLPVAAARRLLG-EG--RLVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVS------LPVLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALR 197          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A8J2X006_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X006_9STRA)

HSP 1 Score: 135 bits (341), Expect = 5.480e-30
Identity = 100/232 (43.10%), Postives = 128/232 (55.17%), Query Frame = 3
Query:  423 HLSLPLLELITPDGCASSSPSDQSSLIANIQRAAA-GGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAASAASAST 1115
            HL    L  +TP G A++   D+ + +  + RAAA GG SLVQLRD  +S       AA +  A +G    VV    E          HLPER            R   P  +GCS HSV A + AA LGADYVQ+GTMFATQ+HPGK+PEG G+  + +R L  E     L+IGVGG+DA+N  K++EAG DGVA IR +  + D E  AR I R L G  +  S A+ +T
Sbjct:   50 HLPRRPLVFVTPPGWAAA---DRRADLERVARAAAKGGASLVQLRDADASRDELQSAAAAVRDALQGTDCSVVINGVE----------HLPERKWRAATE-----RPNGP--LGCSAHSVEAVLAAAALGADYVQLGTMFATQTHPGKIPEGPGLATECRRALD-EREAPPLLIGVGGVDATNAAKLIEAGCDGVAVIRGISDARDPEAAARAICRALAGAGTRISKAAQNT 260          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK)

HSP 1 Score: 128 bits (322), Expect = 2.700e-29
Identity = 86/210 (40.95%), Postives = 121/210 (57.62%), Query Frame = 3
Query:  435 PLLELITPDGCASSSPSDQSS--LIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATE-GRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEG--------VGMLNDVKRRLQAEGFGDVL--VIGVGGIDASNCGKVVEAGGDGVAAIRCLC 1025
            P L LITP+G  +   S+++   +++ I  A  GGVSLVQLRD  ++ +  A +  R+    +   A+F+VNG+ +   A  ADGVHLPE  +   +       + +  ++GCSVHS  AA+ A  + ADY+ VGTMF T SHPGKVPEG        + ML+  +    + G  + L  V GVGGID  NC +V++ GGDGVA I  LC
Sbjct:    4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNGDLDVAIACKADGVHLPEAQVQDFI--NSYKNKKFNGVLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLC 211          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2H5YGE0_9BACT (Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT)

HSP 1 Score: 122 bits (307), Expect = 2.940e-28
Identity = 90/219 (41.10%), Postives = 119/219 (54.34%), Query Frame = 3
Query:  417 RAHLSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGL 1073
            R    LP L L+T D   +  P  Q++      RA AGGV++VQLR+    A+    LAA L +A  GRAL VVN   +   A+GADGVHLPE  +    A R  G     RLVG SVHSV AAV A   GADY+ VG ++ T+SHP     G G+L+ V+R ++      V V+ +GG+ A+   + + AG  GVA I  +  S D E  AR +   L
Sbjct:    6 RPFFPLPCLMLVT-DRSLAPLPLPQAAA-----RAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGRALLVVNDRADVALAAGADGVHLPEDGLPVAKARRLVGPA---RLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAVR------VPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGLRSAL 209          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2W1B5W2_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1B5W2_9CHLR)

HSP 1 Score: 122 bits (306), Expect = 3.350e-28
Identity = 85/219 (38.81%), Postives = 117/219 (53.42%), Query Frame = 3
Query:  426 LSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGE 1082
            L  P+L L+T      + P     L+  + +A AGGV+LVQLRD    A+    LA  L   T+GRAL  VN   +   AS ADGV LPE  +    A R AG      L+G SVHS+  A+EAA  GAD VQVGT+F +Q+HP     GVG++  +   + A       V+G+GGI   N  +V+E G  GVA +R + +S + E  +  + R +  E
Sbjct:    3 LPRPILCLVTDASVLGARP-----LVEAVDKAVAGGVNLVQLRDRSLPARELLALACELRIVTQGRALLFVNDRIDVALASEADGVQLPEAGLPVAEARRIAGDR---LLIGRSVHSLQTAIEAAEQGADLVQVGTVFPSQTHPELEASGVGLVTVLASCVSAP------VVGIGGITGGNAREVIEGGASGVAVVRAILASEEPEAASATLKRVIEAE 207          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A7X3VB43_9CHLR (Thiamine-phosphate synthase n=2 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3VB43_9CHLR)

HSP 1 Score: 121 bits (304), Expect = 7.170e-28
Identity = 85/221 (38.46%), Postives = 118/221 (53.39%), Query Frame = 3
Query:  414 VRAHLSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLR 1076
            ++  L LP L L+T  G  +S       ++   + A AGGV +VQLRD    A     LA  L S TEGRAL +VN   +    SGADGV L E  +    A R  G E    L+G SVHSV  AV+A   GAD++ +GT+F T SHPG    G+ ++ DV  R+       + VIG+GGI  SN   +VE+G  G A I  +  ++D +  + +I+  +R
Sbjct:    1 MKPKLPLPCLCLVTDRGRTAS-----DDIVNTARGAVAGGVGMVQLRDKDCPAAEMLSLARELRSVTEGRALLIVNDRVDIALLSGADGVQLGENGLDAASARRLVGSE---MLIGRSVHSVEGAVKAESSGADFLVLGTIFETASHPGADTGGLKLVRDVTDRI------GIPVIGIGGISKSNVAGLVESGAAGAAVITAVSMAADPKAASLNILEAMR 207          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2N0KGQ3_9CHLR (Thiamine-phosphate synthase n=1 Tax=SAR202 cluster bacterium Casp-Chloro-G3 TaxID=1926605 RepID=A0A2N0KGQ3_9CHLR)

HSP 1 Score: 118 bits (296), Expect = 6.650e-27
Identity = 78/205 (38.05%), Postives = 114/205 (55.61%), Query Frame = 3
Query:  486 DQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGLRGENSAASA 1100
            D+++L+A I  A +GGV LVQLR+         ELA R+  A    A+ ++N   +   A  A+GV L E  +  + A +  G +    L+G SVHS+  A++AA  GAD++ VGTMFA++SHPG+ P G  ++  +  R     FG      +GGIDASN G V++AG  GVA I  + +S   +  AR I R +   + AA A
Sbjct:   11 DEATLVARIADAVSGGVDLVQLREKDLPGGPLLELAQRIREAISDSAMLIINERVDVAAAIAANGVQLGEEALPTIEARKILGHD---TLIGRSVHSLEGALQAAEQGADFLLVGTMFASRSHPGEEPAGPALVRQITVRCSLPLFG------IGGIDASNAGHVMDAGASGVAVITSILASPSPKEAARQIKRAIVASSLAARA 206          
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Match: A0A2E7PCV5_9CHLR (Thiamine-phosphate synthase n=6 Tax=Chloroflexi TaxID=200795 RepID=A0A2E7PCV5_9CHLR)

HSP 1 Score: 118 bits (296), Expect = 7.380e-27
Identity = 78/216 (36.11%), Postives = 117/216 (54.17%), Query Frame = 3
Query:  426 LSLPLLELITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAARLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGWPRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDVKRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEVEARHIMRGL 1073
            L  P L L+T  G A      Q  L+  + +A AGGV LVQLRD +       +LAA+L+ A +GRA  +VN   +   A+GA GV + E  +         G   +   +G SVHS  AA+ A + GAD++ VGTM+A+ SHPG+ P G G++ D+    +      + +IG+GG+   N G++VEAG  GVA I  + ++ D +  A  + + L
Sbjct:    5 LPKPCLCLVTDPGIA------QKDLVERVAQAVAGGVDLVQLRDKEMPGGQLLDLAAQLLKAIDGRAKLLVNERADVAHAAGAHGVQIGEEGLPVSAVRNIVGDHSF---IGRSVHSSSAALAAEKEGADFLVVGTMYASSSHPGEEPAGPGLMRDISGTCR------LPLIGIGGVTPENAGELVEAGASGVAVITNILAAPDPKAAAAKLKQSL 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig154.3990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L486_9PHAE9.890e-10566.43TMP-TENI domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN05_9STRA2.260e-4552.11Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribo... [more]
A0A2H5YM77_9BACT5.110e-3546.91Thiamine-phosphate synthase n=1 Tax=bacterium HR25... [more]
A0A8J2X006_9STRA5.480e-3043.10Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3XPQ6_HETAK2.700e-2940.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2H5YGE0_9BACT2.940e-2841.10Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID... [more]
A0A2W1B5W2_9CHLR3.350e-2838.81Thiamine-phosphate synthase n=1 Tax=Chloroflexi ba... [more]
A0A7X3VB43_9CHLR7.170e-2838.46Thiamine-phosphate synthase n=2 Tax=Dehalococcoidi... [more]
A0A2N0KGQ3_9CHLR6.650e-2738.05Thiamine-phosphate synthase n=1 Tax=SAR202 cluster... [more]
A0A2E7PCV5_9CHLR7.380e-2736.11Thiamine-phosphate synthase n=6 Tax=Chloroflexi Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig154contigH-canaliculatus_F_contig154:10781..13240 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score325.9
Seed ortholog evalue2.2e-86
Seed eggNOG ortholog2880.D7FV85
EggNOG free text desc.Thiamine monophosphate synthase
EggNOG OGs2S9Y2@2759,COG0352@1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-14_000170.1
Exons2
Model size1825
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig154.3990.1prot_H-canaliculatus_F_contig154.3990.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig154 10927..12554 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929276.6097267-UTR-H-canaliculatus_F_contig154:10780..109261622929276.6097267-UTR-H-canaliculatus_F_contig154:10780..10926Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig154 10781..10926 +
1696845746.84734-UTR-H-canaliculatus_F_contig154:10780..109261696845746.84734-UTR-H-canaliculatus_F_contig154:10780..10926Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig154 10781..10926 +
1622929276.656683-UTR-H-canaliculatus_F_contig154:12554..132401622929276.656683-UTR-H-canaliculatus_F_contig154:12554..13240Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig154 12555..13240 +
1696845746.8923554-UTR-H-canaliculatus_F_contig154:12554..132401696845746.8923554-UTR-H-canaliculatus_F_contig154:12554..13240Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig154 12555..13240 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929276.6282973-CDS-H-canaliculatus_F_contig154:10926..116041622929276.6282973-CDS-H-canaliculatus_F_contig154:10926..11604Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig154 10927..11604 +
1696845746.8604162-CDS-H-canaliculatus_F_contig154:10926..116041696845746.8604162-CDS-H-canaliculatus_F_contig154:10926..11604Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig154 10927..11604 +
1622929276.6420987-CDS-H-canaliculatus_F_contig154:12239..125541622929276.6420987-CDS-H-canaliculatus_F_contig154:12239..12554Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig154 12240..12554 +
1696845746.8765194-CDS-H-canaliculatus_F_contig154:12239..125541696845746.8765194-CDS-H-canaliculatus_F_contig154:12239..12554Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig154 12240..12554 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig154.3990.1

>prot_H-canaliculatus_F_contig154.3990.1 ID=prot_H-canaliculatus_F_contig154.3990.1|Name=mRNA_H-canaliculatus_F_contig154.3990.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=331bp
MVTFPHRQPSAAASAPGTRRRERRCPPSTSLLHSFLRACLLVALGVNSVD
ALLPVAGRGNPSVTDALQKLTKRGCGRSSSGSNEMDQDAVRAHLSLPLLE
LITPDGCASSSPSDQSSLIANIQRAAAGGVSLVQLRDYKSSAKSKAELAA
RLVSATEGRALFVVNGEPEAVRASGADGVHLPERMIGCLVALRGAGREGW
PRLVGCSVHSVPAAVEAARLGADYVQVGTMFATQSHPGKVPEGVGMLNDV
KRRLQAEGFGDVLVIGVGGIDASNCGKVVEAGGDGVAAIRCLCSSSDAEV
EARHIMRGLRGENSAASAASASTAFVGGKR*
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mRNA from alignment at H-canaliculatus_F_contig154:10781..13240+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig154.3990.1 ID=mRNA_H-canaliculatus_F_contig154.3990.1|Name=mRNA_H-canaliculatus_F_contig154.3990.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2460bp|location=Sequence derived from alignment at H-canaliculatus_F_contig154:10781..13240+ (Hapterophycus canaliculatus Oshoro5f female)
GGAATGATTCCTATGTCTGTCGTTGGAAATTTGCTCTGCTGTGTCTCCGT GTCTCTGTCCCTGCTCGCGGCATAAGAAGGAGCCCGTAGTCGCAGTCTCT TCGTAAACGACGATCATCGTAAACGCATTGTGTGCAGGGCGACTGTATGG TGACTTTTCCCCACAGACAACCATCAGCGGCAGCATCAGCACCGGGGACG AGGAGACGAGAAAGAAGGTGCCCGCCTTCTACCTCGCTTCTTCACAGCTT TCTCCGCGCGTGCCTTCTCGTGGCCCTCGGAGTCAACTCCGTCGACGCTC TCCTACCGGTGGCTGGCCGAGGCAACCCTAGCGTAACAGATGCTCTTCAA AAACTGACGAAGAGGGGTTGTGGCAGGTCGTCCTCCGGATCGAACGAAAT GGATCAAGATGCCGTCCGCGCACATCTATCCCTGCCGCTGTTGGAACTCA TTACACCGGACGGCTGTGCATCGTCGTCTCCATCCGACCAGTCATCTCTC ATAGCAAACATACAAAGGGCTGCGGCAGGGGGTGTCTCGCTCGTTCAGCT TCGCGACTACAAGTCGAGCGCGAAGAGCAAAGCGGAGTTGGCCGCTCGGC TTGTTAGTGCCACCGAAGGACGGGCCCTATTCGTTGTAAACGGCGAGCCC GAGGCTGTTCGTGCCAGCGGTGCTGACGGGGTTCACCTTCCGGAGCGCAT GATTGGTTGCCTGGTAGCTCTGCGGGGTGCAGGTAGAGAAGGGTGGCCCC GCCTAGTTGGGTGTTCCGTTCACTCGGTTCCTGCAGCGGTCGAGGCTGCG AGATTGGGGGCGGATTATGTCCAGGTATGTTCAGCACAGGGTAAGTGTAG TTTTGAAGGACCAATACATCAAAACCCGTCTACCTTGTACGTGGTGTAGG CGCCTCGGGACCCACGAGGGAGCGGAACCCCAACACTCCCCTGCGAAAAA AAAAAGTTGCTTCCCCAGCAATTACCAATTACTACTGTAGAAAATTGTGC GAACACAAGAGCTGTTCATCCAGGGCTGGCATGAACACACGAGGCAGGCA GGCAGGCACAGCAGTTGGAGCAGTTGGTGTCTGCCTTCCTTAAGCGACAC TCCCATCCTGTGGTCTTCCTGTGGTCATCCTGTGGCCATGCTGTGCACCG AACTGTCCACCGAACTGTTCACCGAACTGTACACCCGTCGAGCAGGATCT AGGTGGGACAAGCGAAGACGATTTACCCCTTCGCATGCAGGCGGAACATT AGCTCCTGGCTGCTGTTGCTCGACCCAGTGGCTGCTGGTATTCCGTGGAC AAAAAATCACTCCCCAAGCCGTCCTCGACATGGTCTATCGTATATGTTCT ACAGGTGTAGCTGCGCTTCTTGGGCCACGTGACGTTACATGTGTCTTCGC ATGCGTCTTTGCTGCAGCGCGCACATAATCACGCTCACGCACTCGTTTTT GCGCCCCAGGTGGGTACGATGTTCGCCACACAGTCGCACCCGGGCAAGGT GCCAGAGGGAGTGGGGATGCTGAACGACGTGAAAAGACGGCTGCAAGCCG AGGGCTTCGGCGATGTGTTGGTGATCGGCGTGGGAGGGATCGATGCATCG AATTGTGGGAAGGTGGTCGAAGCCGGTGGGGACGGGGTGGCGGCAATTCG GTGTTTGTGCTCGAGCAGCGATGCCGAGGTTGAGGCTCGACACATCATGC GGGGTTTGAGGGGGGAGAACTCGGCGGCTTCTGCGGCTTCTGCCAGCACT GCTTTTGTAGGGGGCAAAAGATAGTTGGTTGAGGAGGTGTTGAGGTTTGG CGTTGACAAAGACTCACCCCGTATTTGAGATTATGACTACCAAGCCACCC CATTCCATTGAGTTGGCGGTGTCTTCGTGTTTCCGGATGCTGTCCTTGGT ACCCTGATTGGAGATTGGCTTAGTTTTTGTTTTGCTTGTTGTTGTCGATG TTGTCGTCCTTCCTACTTTGTTTGCCGCTGTCTACTCACATATGTACGGT TCGCAGTGTCCTTCTGGACCCTCCATAGTTGTTGGTTGGCACTCCGACCT TGCCCGGTTGCGATGCTACCATAACTCAGATATGCATCTCAGTCCAGGGT CGATAGTTGCCATGGGCGAGGCTAGAACACCTGAAACACGGTCATGCGAT CAAACAGTACCTTGGGTATGATCAGTGCTCGAGTCGTTTTTCAACCGCGA CAAAAGTTGGTGAACGTTGTTTCTTCATATCACAGGTACTAAGGAATACG GGAGTGATCCTGGGAAGTGCGGCGGATGAATCTTTGTCGCAATCTTGATG TTAGTGAGAAACGACGTGTTTTGTGAGCGAGGCTGCTTTTGTTCAGTGTT CGCTGGCTCACATTTCGGCAAGAAGTAATGGCATCTTCTCACCCACTAAA AAGCGAAACAAAATAGCAAGTGTGATGCCTTGTGCCGCAAGAAAGAGAAG AGCTTCGTAC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig154:10781..13240+

>mRNA_H-canaliculatus_F_contig154.3990.1 ID=mRNA_H-canaliculatus_F_contig154.3990.1|Name=mRNA_H-canaliculatus_F_contig154.3990.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1986bp|location=Sequence derived from alignment at H-canaliculatus_F_contig154:10781..13240+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTGACTTTTCCCCACAGACAACCATCAGCGGCAGCATCAGCACCGGG
GACGAGGAGACGAGAAAGAAGGTGCCCGCCTTCTACCTCGCTTCTTCACA
GCTTTCTCCGCGCGTGCCTTCTCGTGGCCCTCGGAGTCAACTCCGTCGAC
GCTCTCCTACCGGTGGCTGGCCGAGGCAACCCTAGCGTAACAGATGCTCT
TCAAAAACTGACGAAGAGGGGTTGTGGCAGGTCGTCCTCCGGATCGAACG
AAATGGATCAAGATGCCGTCCGCGCACATCTATCCCTGCCGCTGTTGGAA
CTCATTACACCGGACGGCTGTGCATCGTCGTCTCCATCCGACCAGTCATC
TCTCATAGCAAACATACAAAGGGCTGCGGCAGGGGGTGTCTCGCTCGTTC
AGCTTCGCGACTACAAGTCGAGCGCGAAGAGCAAAGCGGAGTTGGCCGCT
CGGCTTGTTAGTGCCACCGAAGGACGGGCCCTATTCGTTGTAAACGGCGA
GCCCGAGGCTGTTCGTGCCAGCGGTGCTGACGGGGTTCACCTTCCGGAGC
GCATGATTGGTTGCCTGGTAGCTCTGCGGGGTGCAGGTAGAGAAGGGTGG
CCCCGCCTAGTTGGGTGTTCCGTTCACTCGGTTCCTGCAGCGGTCGAGGC
TGCGAGATTGGGGGCGGATTATGTCCAGATGGTGACTTTTCCCCACAGAC
AACCATCAGCGGCAGCATCAGCACCGGGGACGAGGAGACGAGAAAGAAGG
TGCCCGCCTTCTACCTCGCTTCTTCACAGCTTTCTCCGCGCGTGCCTTCT
CGTGGCCCTCGGAGTCAACTCCGTCGACGCTCTCCTACCGGTGGCTGGCC
GAGGCAACCCTAGCGTAACAGATGCTCTTCAAAAACTGACGAAGAGGGGT
TGTGGCAGGTCGTCCTCCGGATCGAACGAAATGGATCAAGATGCCGTCCG
CGCACATCTATCCCTGCCGCTGTTGGAACTCATTACACCGGACGGCTGTG
CATCGTCGTCTCCATCCGACCAGTCATCTCTCATAGCAAACATACAAAGG
GCTGCGGCAGGGGGTGTCTCGCTCGTTCAGCTTCGCGACTACAAGTCGAG
CGCGAAGAGCAAAGCGGAGTTGGCCGCTCGGCTTGTTAGTGCCACCGAAG
GACGGGCCCTATTCGTTGTAAACGGCGAGCCCGAGGCTGTTCGTGCCAGC
GGTGCTGACGGGGTTCACCTTCCGGAGCGCATGATTGGTTGCCTGGTAGC
TCTGCGGGGTGCAGGTAGAGAAGGGTGGCCCCGCCTAGTTGGGTGTTCCG
TTCACTCGGTTCCTGCAGCGGTCGAGGCTGCGAGATTGGGGGCGGATTAT
GTCCAGGTGGGTACGATGTTCGCCACACAGTCGCACCCGGGCAAGGTGCC
AGAGGGAGTGGGGATGCTGAACGACGTGAAAAGACGGCTGCAAGCCGAGG
GCTTCGGCGATGTGTTGGTGATCGGCGTGGGAGGGATCGATGCATCGAAT
TGTGGGAAGGTGGTCGAAGCCGGTGGGGACGGGGTGGCGGCAATTCGGTG
TTTGTGCTCGAGCAGCGATGCCGAGGTTGAGGCTCGACACATCATGCGGG
GTTTGAGGGGGGAGAACTCGGCGGCTTCTGCGGCTTCTGCCAGCACTGCT
TTTGTAGGGGGCAAAAGATAGGTGGGTACGATGTTCGCCACACAGTCGCA
CCCGGGCAAGGTGCCAGAGGGAGTGGGGATGCTGAACGACGTGAAAAGAC
GGCTGCAAGCCGAGGGCTTCGGCGATGTGTTGGTGATCGGCGTGGGAGGG
ATCGATGCATCGAATTGTGGGAAGGTGGTCGAAGCCGGTGGGGACGGGGT
GGCGGCAATTCGGTGTTTGTGCTCGAGCAGCGATGCCGAGGTTGAGGCTC
GACACATCATGCGGGGTTTGAGGGGGGAGAACTCGGCGGCTTCTGCGGCT
TCTGCCAGCACTGCTTTTGTAGGGGGCAAAAGATAG
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