mRNA_H-canaliculatus_F_contig15111.3840.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI) HSP 1 Score: 102 bits (253), Expect = 9.860e-24 Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 1
Query: 13 VQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSR 174
VQETVFQCLQSWVRHVNVPGDE+VRNPLL AAF ALGNQELFETAVD+LVEV R
Sbjct: 262 VQETVFQCLQSWVRHVNVPGDEVVRNPLLSAAFDALGNQELFETAVDLLVEVLR 315
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: A0A835Z666_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z666_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.860e-13 Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 13 VQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSR 174
VQET+FQCLQSWVR+ ++P +L +PL PAAF AL +LFE A D+LV+V R
Sbjct: 203 VQETIFQCLQSWVRYTSIPPADLAAHPLFPAAFDALRTPDLFEAAADLLVQVLR 256
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: M4BQJ6_HYAAE (Xpo1 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQJ6_HYAAE) HSP 1 Score: 56.2 bits (134), Expect = 1.310e-7 Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1
Query: 1 DRPTVQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSRFSED 186
D QE V + L SW + VP + +VRNPLL + + G ELF+TAVD+ VEV + D
Sbjct: 246 DSVETQEIVLRALTSWFGYARVPSEVVVRNPLLHSLLSFFGRDELFDTAVDLAVEVVKSCSD 307
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: A0A409V8A8_9AGAR (Importin N-terminal domain-containing protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409V8A8_9AGAR) HSP 1 Score: 54.7 bits (130), Expect = 4.560e-7 Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 13 VQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSRFSED 186
VQ +F CL +W+ +P EL PLL AF ALG+ ELF+ AVDV+ ++ +++
Sbjct: 196 VQTQIFHCLHAWLVAGEIPVSELAETPLLAYAFEALGSDELFDPAVDVICQIIHETQE 253
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: A0A3G2S5F3_9BASI (Importin N-terminal domain-containing protein n=2 Tax=Malassezia restricta TaxID=76775 RepID=A0A3G2S5F3_9BASI) HSP 1 Score: 54.3 bits (129), Expect = 6.240e-7 Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 10 TVQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSRFSED 186
T+Q +F CL+SW++ V +L PLL F AL ++ELF+TAVDVL ++ +++
Sbjct: 204 TIQAMIFACLRSWLKTGEVTAMQLAETPLLSCTFDALQDEELFDTAVDVLCDLINETQE 262
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: A0A367KNW6_RHIST (Nuclear import receptor n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KNW6_RHIST) HSP 1 Score: 53.5 bits (127), Expect = 1.160e-6 Identity = 24/62 (38.71%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 1 DRPTVQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSRFSED 186
+ +QE +F CL SW+ ++ +V +PL AF AL ++ELF+ AVD++VE+ R + D
Sbjct: 6 ENSALQEQIFSCLHSWIYTGSLDLRAVVGSPLYQLAFQALNSEELFDIAVDIVVEIIRETSD 67
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: A0A166FIF7_9AGAM (ARM repeat-containing protein n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166FIF7_9AGAM) HSP 1 Score: 53.5 bits (127), Expect = 1.170e-6 Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 13 VQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSRFSED 186
VQ VF CL+SW+ V EL PLL AF ALG+ ELF+ AVDV+ ++ +++
Sbjct: 196 VQVQVFSCLRSWLIAGEVSASELSETPLLAYAFEALGSDELFDVAVDVICDLIHETQE 253
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: A0A165W486_9AGAM (ARM repeat-containing protein n=2 Tax=Gloeophyllales TaxID=452339 RepID=A0A165W486_9AGAM) HSP 1 Score: 52.8 bits (125), Expect = 2.180e-6 Identity = 22/58 (37.93%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 13 VQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSRFSED 186
+Q +F CL+SW+ + +L PLL AF ALG++ELF+ AVDV+ ++ +++
Sbjct: 196 IQSQIFNCLRSWLVAGEISAQDLTTTPLLGYAFEALGSEELFDAAVDVICDLIHETQE 253
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: A0A8H7S0N3_9FUNG (Importin N-terminal domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S0N3_9FUNG) HSP 1 Score: 52.0 bits (123), Expect = 4.090e-6 Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 13 VQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEV 168
+QE VF+CL SW+R ++ + +V +PLL AF AL N +LF+ AVD+ VE+
Sbjct: 199 LQERVFKCLISWLRAGDMDINIIVNSPLLNIAFEALDNDDLFDVAVDLGVEI 250
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Match: A8PSV5_MALGO (Importin N-terminal domain-containing protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8PSV5_MALGO) HSP 1 Score: 52.0 bits (123), Expect = 4.090e-6 Identity = 23/58 (39.66%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 13 VQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVDVLVEVSRFSED 186
+Q + CL+SW++ V +L PLL AF AL N+ELF+TAVDV+ ++ +++
Sbjct: 213 IQAMILACLRSWLKAGEVSALQLAETPLLACAFDALQNEELFDTAVDVVCDLINETQE 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15111.3840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15111.3840.1 >prot_H-canaliculatus_F_contig15111.3840.1 ID=prot_H-canaliculatus_F_contig15111.3840.1|Name=mRNA_H-canaliculatus_F_contig15111.3840.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=65bp DRPTVQETVFQCLQSWVRHVNVPGDELVRNPLLPAAFAALGNQELFETAVback to top mRNA from alignment at H-canaliculatus_F_contig15111:2025..2219+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15111.3840.1 ID=mRNA_H-canaliculatus_F_contig15111.3840.1|Name=mRNA_H-canaliculatus_F_contig15111.3840.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=195bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15111:2025..2219+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15111:2025..2219+ >mRNA_H-canaliculatus_F_contig15111.3840.1 ID=mRNA_H-canaliculatus_F_contig15111.3840.1|Name=mRNA_H-canaliculatus_F_contig15111.3840.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=390bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15111:2025..2219+ (Hapterophycus canaliculatus Oshoro5f female)back to top |