mRNA_H-canaliculatus_F_contig1498.3740.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1498.3740.1
Unique NamemRNA_H-canaliculatus_F_contig1498.3740.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 1.110e-130
Identity = 235/277 (84.84%), Postives = 248/277 (89.53%), Query Frame = 1
Query:  448 YVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXN-GTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERLQRDVEEGDSDSVEGGGMPMEQSAKDGARPTAVGHAVRAP 1275
            YVILDYTVPGLGFV+D LTSFLEWVEDNPGLGA+AFALVYVFTTV FIPGSLLTLGAGLVFGRALGTG G+LVG++AVLAGATVG+ILAFLLGRFVLQEQAQGLFNKFKVL AVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVT V FRDYA+GCVGFIPGTVAFVFIGTTASGLLGD    XXXXXXX  GTVQLI+ IVGGIATVIAVVLISIYAKRALNKVLEEDR+EQE L+  +E G+     GG   MEQSA+DGARP  V HAVR P
Sbjct:   57 YVILDYTVPGLGFVADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLLGDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVEQEALEMGLESGN-----GGMNNMEQSAQDGARPAVVEHAVRMP 328          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA)

HSP 1 Score: 283 bits (723), Expect = 5.770e-85
Identity = 166/305 (54.43%), Postives = 222/305 (72.79%), Query Frame = 1
Query:  370 DSRAPQTKQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXX------------NGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERLQRDVEEGDSDSVEGGGMPMEQSAKDGARPT 1248
            D+ A + K++K+ K  L ++L+ +++YVI+DY+VP LG V+ VL+ FL WVEDNP  G  AFA VY+F TVAFIPGSLLTLGAGLVFGRALG G GV +G+ AV+ GA++GAI+AF+LGR+VLQ+ AQ LFNKFK++ AV++AI+SQGLKL +LLRLSPVVPF+AFNY+MG+TA+  +DY +GC+G IPGTVA+VFIG++ASG+ GD                       N TV LI+ IVG IATVIAV LIS YAK+ALN++L E  +E+ +  +D+E  +      G +  ++S KD   P+
Sbjct:   13 DTGASKGKKEKIRKLCLGLVLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGI-GDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEENQDGKDLENCE------GKLDEKKSNKDNVEPS 310          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK)

HSP 1 Score: 250 bits (638), Expect = 9.910e-73
Identity = 145/258 (56.20%), Postives = 183/258 (70.93%), Query Frame = 1
Query:  391 KQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGT------------VQLIIAIVGGIATVIAVVLISIYAKRALNKVL 1128
            ++ KLIK GL  LL+ I++YV+LDYT+P LG V+ +LTSFL WVE++PG G +AFA VYV TTV FIPGS+LTLGAGLVFGRAL                      +AFLLGR+VLQ+ AQ LFNKF VL AV++AI+++GL+LVILLRLSPV+PFSAFNYVMG+T V FR Y LGCVG +PGTVA+VFIGT+A+GLLGD         XX               V +++ +VG  ATV+AVVLI++ ++RAL +VL
Sbjct:   44 RKNKLIKFGLLSLLVGIIIYVVLDYTLPSLGHVNRILTSFLLWVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVL 301          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 1.180e-55
Identity = 115/242 (47.52%), Postives = 165/242 (68.18%), Query Frame = 1
Query:  502 TSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTV-QLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQ--ERLQRDVEEGDSDSVEGGGMPME 1218
            TSF EW+EDNP  G + FAL++  +T+ F+PG LLT+GAG+ FGRALG GFGVL G+VAVL GA V  ++AF LGR+VL EQAQ    ++++L+AVN AI+  G+K++ILLRLSP+VPFS FN++ G+T V  RDY LG VG +PGT+AFV+IG + +G + +              + ++   IVG +A V+A+V ++IYA+RAL + L E  ++   ++ ++   EG +  VE G  P E
Sbjct:   95 TSF-EWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGEADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELDANADKEEKAEHEGSATDVECGSSPGE 335          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S4JVV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVV3_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.800e-54
Identity = 109/256 (42.58%), Postives = 169/256 (66.02%), Query Frame = 1
Query:  391 KQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERL 1158
            ++ ++ K  L ++L+  +V+VI+D T  G  ++ D + +FL W+E+NP  G   F  VYV  TV F+PG +LTLGAG VF  A GTG G+ VGT++V  GA++G++LAFL+ R++L+E A GL  KF +  A+++A++ +GLK++ILLRLSPV+PF+A NYV GVTAV F+DY+L     +PGT+ +VF+G +A  L              +  + +   +VG +  ++AV L S YAK+ LNK+L+++    ER+
Sbjct:   12 RRSRIKKLVLALVLIGFIVFVIIDSTTNG--YIKDGIQTFLRWIEENPIEGFFMFMGVYVLATVLFVPGLILTLGAGYVFSNAFGTGLGLFVGTISVFVGASLGSMLAFLISRYILREWAVGLTEKFPIFRAIDQALEEKGLKIIILLRLSPVIPFNALNYVCGVTAVSFKDYSLALFAMLPGTILYVFLGASAQSLA------TIGSSTDSKALTISTVVVGVVLGIVAVALSSRYAKKELNKILDQEEEANERI 259          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S2A6Q3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Q3_TRICV)

HSP 1 Score: 190 bits (482), Expect = 1.930e-50
Identity = 108/276 (39.13%), Postives = 174/276 (63.04%), Query Frame = 1
Query:  340 DVGVEYTSDDDSRAPQT------KQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQ 1149
            D+ +++  DD+   P+       K+  L K  + ++L+ ++V++I+D    G  FV   +   L+W+E+NP  G   F  VY   TV F+PGSLLTLG+G VF  + G GFGVL+ T+AV  GAT+GA++AF+LGR++L++  + L  K+ V  A+++A++ +GL+++ILLRLSP++PF+A NY+ GVT+V F+ YA      +PGT+ FVF+G +A  L+                V +   +VG +  VIA+ L S YAK+ LNK+LE+++ ++
Sbjct:   17 DILIDHGGDDNDSWPKEVKACTDKRALLNKIIVGLVLVGLIVFIIVDSVTHG--FVKGAIEGLLQWIEENPIRGLFVFMAVYFVATVLFVPGSLLTLGSGFVFAESFGLGFGVLLATLAVFVGATLGALVAFILGRYLLRDWVENLTKKYNVFRAIDKALEEKGLRIMILLRLSPIIPFNALNYICGVTSVSFKHYAWANFAILPGTILFVFLGASAGSLVDSGNGGDTP------VVTIATIVVGVVFGVIAIALTSRYAKKELNKILEQEKTDE 284          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.960e-50
Identity = 111/294 (37.76%), Postives = 179/294 (60.88%), Query Frame = 1
Query:  376 RAPQTKQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERLQRDVEE-GDSDSVEGGGMPMEQSAKDGARPTAV 1254
            +A + ++ +LIK  L +LL+  ++YVI+D+       +   + SFL W+EDNP  G  AF  VY   T+ F PG +LTLGAG VF  ALG G GV++ T AV  GA+ G++ AFL+GR++L++   GL  K+ +  AV+ A+K +GL+++ILLRLSP++PF+A NY++GVT+V FRD+ +  +G +PGT+ +VF+G++A  L              N  V+++  ++G +  ++ V + S YA++ L  V+   R E E  Q +VE+ GD +      M + +S + G     +
Sbjct:   21 QAREKRKARLIKIALGLLLVGFIIYVIVDFATSK--HLRTAMESFLNWIEDNPTEGVFAFMGVYFVATILFAPGLILTLGAGFVFANALGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLGSSAGSLTDSSSGGD------NSAVRILTIVLGSVFGILGVCVTSYYARKELQNVIS--RREAEAAQLEVEDIGDKEMDSMLRMEVGESTESGENQNGI 304          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A0G4EY60_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EY60_VITBC)

HSP 1 Score: 187 bits (476), Expect = 1.760e-49
Identity = 115/246 (46.75%), Postives = 160/246 (65.04%), Query Frame = 1
Query:  409 KAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIE 1146
            K  +F++++AI+VY+I+D T      V++ L  F EWV+DNP  G +A+  VY+  TVAFIPGS+LTLGAG  F  A G G G+  G  AVL GA VGA LAF  GRF+ +   QGL +KFKV+ A+++  ++QGLKL ILLRLSPVVPFSAFNY+MG T   +RDYA+G +G IPGT  +V+IG   +   G            +   Q +   VG +AT IAV +++ +A++AL ++ E++  E
Sbjct:   55 KLLVFLVIIAIIVYIIIDSTTGQR--VAEGLDIFKEWVQDNPATGILAYMAVYMVCTVAFIPGSILTLGAGFTFVCAFGNGPGMAAGIGAVLVGAFVGAQLAFFCGRFLFKSWVQGLTDKFKVMRAIDKVFETQGLKLNILLRLSPVVPFSAFNYIMGGTRTRYRDYAIGTLGIIPGTALYVYIGAIPA-FAGACSGKAEGSGHWS---QWVFLAVGLVATFIAVFIVTWFARKALREITEKEAAE 294          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: D7G9F3_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F3_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 6.270e-49
Identity = 92/163 (56.44%), Postives = 126/163 (77.30%), Query Frame = 1
Query:  502 TSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGD 990
            TSF +W+EDNP  G + FAL++  +T+ F+PG LLT+GAG+ FGRALG GFGVL G+VAVL GA V  ++AF LGR+VL EQAQ    ++++L+AVN AI+  G+K++ILLRLSP+VPFS FN++ G+T V  RDY LG VG +PGT+AFV+IG + +G + +
Sbjct:   95 TSF-DWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNE 256          
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S1CUZ4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CUZ4_CYCTE)

HSP 1 Score: 187 bits (474), Expect = 1.240e-48
Identity = 119/276 (43.12%), Postives = 173/276 (62.68%), Query Frame = 1
Query:  352 EYTSDDDSRAPQTKQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERLQRDVEEG 1179
            E T DD+ R  Q KQ    K  + + LL  ++YV++D    G   V   + SFL W+E+NP  G  AF +VY   T+ F+PGSLLTLG+G VF  A G G GVL+G+++V  GA+ GAI+AFLLGR++L+E  QGL  K+ V  A++ A++ +G +++ LLRLSP++PF+A NY+ GVTA+ F   AL  +  IPGTV +VF+G +A G L D           +G + +I+ +VG +  + A+ L S YAK+ LN+V+    IE+E  +   EEG
Sbjct:  122 EETEDDEGR--QRKQNCWQKLVIGIFLLGFIIYVVIDSFTAG--NVRSAIGSFLTWIENNPIPGFFAFMVVYFVATILFVPGSLLTLGSGFVFANAFGLGPGVLIGSLSVFLGASSGAIVAFLLGRYLLREWVQGLTKKYAVFEALDIALEEKGFRIMALLRLSPIIPFNAINYIGGVTAISFYANALALIVIIPGTVLYVFLGASA-GSLADSASSGE-----SGPITIIVVVVGCVFGLAAIFLTSYYAKKELNRVI----IERETKELMTEEG 383          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIK1_ECTSI1.110e-13084.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2Y1P9_9STRA5.770e-8554.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3YEX9_HETAK9.910e-7356.20Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5JID7_9PHAE1.180e-5547.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4JVV3_9STRA4.800e-5442.58Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2A6Q3_TRICV1.930e-5039.13Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2MII1_9STRA3.960e-5037.76Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A0G4EY60_VITBC1.760e-4946.75Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
D7G9F3_ECTSI6.270e-4956.44Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectoc... [more]
A0A7S1CUZ4_CYCTE1.240e-4843.12Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1498contigH-canaliculatus_F_contig1498:12735..16858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.3
Seed ortholog evalue1.1e-109
Seed eggNOG ortholog2880.D7FIK1
KEGG rclassRC00046
KEGG koko:K00486
KEGG ReactionR01960
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
EggNOG free text desc.canonical Wnt signaling pathway involved in osteoblast differentiation
EggNOG OGsCOG0398@1,KOG3140@2759
EC1.14.13.9
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMajor facilitator superfamily domain
Ec32 orthologEc-27_000060.1
Exons4
Model size2525
Cds size1023
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1498.3740.1prot_H-canaliculatus_F_contig1498.3740.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1498 13979..16600 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929238.7262886-UTR-H-canaliculatus_F_contig1498:12734..139781622929238.7262886-UTR-H-canaliculatus_F_contig1498:12734..13978Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1498 12735..13978 -
1696845730.6571803-UTR-H-canaliculatus_F_contig1498:12734..139781696845730.6571803-UTR-H-canaliculatus_F_contig1498:12734..13978Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1498 12735..13978 -
1622929238.8227315-UTR-H-canaliculatus_F_contig1498:16600..168581622929238.8227315-UTR-H-canaliculatus_F_contig1498:16600..16858Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1498 16601..16858 -
1696845730.7083683-UTR-H-canaliculatus_F_contig1498:16600..168581696845730.7083683-UTR-H-canaliculatus_F_contig1498:16600..16858Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1498 16601..16858 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929238.742676-CDS-H-canaliculatus_F_contig1498:13978..143811622929238.742676-CDS-H-canaliculatus_F_contig1498:13978..14381Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1498 13979..14381 -
1696845730.6697266-CDS-H-canaliculatus_F_contig1498:13978..143811696845730.6697266-CDS-H-canaliculatus_F_contig1498:13978..14381Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1498 13979..14381 -
1622929238.7629106-CDS-H-canaliculatus_F_contig1498:14758..149521622929238.7629106-CDS-H-canaliculatus_F_contig1498:14758..14952Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1498 14759..14952 -
1696845730.678882-CDS-H-canaliculatus_F_contig1498:14758..149521696845730.678882-CDS-H-canaliculatus_F_contig1498:14758..14952Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1498 14759..14952 -
1622929238.7863965-CDS-H-canaliculatus_F_contig1498:15253..154691622929238.7863965-CDS-H-canaliculatus_F_contig1498:15253..15469Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1498 15254..15469 -
1696845730.6897817-CDS-H-canaliculatus_F_contig1498:15253..154691696845730.6897817-CDS-H-canaliculatus_F_contig1498:15253..15469Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1498 15254..15469 -
1622929238.805244-CDS-H-canaliculatus_F_contig1498:16390..166001622929238.805244-CDS-H-canaliculatus_F_contig1498:16390..16600Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1498 16391..16600 -
1696845730.700446-CDS-H-canaliculatus_F_contig1498:16390..166001696845730.700446-CDS-H-canaliculatus_F_contig1498:16390..16600Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1498 16391..16600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1498.3740.1

>prot_H-canaliculatus_F_contig1498.3740.1 ID=prot_H-canaliculatus_F_contig1498.3740.1|Name=mRNA_H-canaliculatus_F_contig1498.3740.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=341bp
MDDSLVTSNRGTNYGLQDEQVSSAPAMDVGVEYTSDDDSRAPQTKQQKLI
KAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFA
LVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAI
LAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPF
SAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDDDEQE
ESSDSNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERL
QRDVEEGDSDSVEGGGMPMEQSAKDGARPTAVGHAVRAPA*
back to top

mRNA from alignment at H-canaliculatus_F_contig1498:12735..16858-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1498.3740.1 ID=mRNA_H-canaliculatus_F_contig1498.3740.1|Name=mRNA_H-canaliculatus_F_contig1498.3740.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4124bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1498:12735..16858- (Hapterophycus canaliculatus Oshoro5f female)
CGGCAATTCACCGAGATATCGGCCTATTGTAACAATCAACTAACGAACCG TTTTCCCGACTGTACAAGTAGTCTTGACCTTTCTGCTTTCTGCACGTTCC ACCATCAGTCACTCCACATCCACATCACCAACCAAGAACCCTCTGTCACT CACGAATCGGGTATCAAAAGCGCAAGCGAGCGCAGCGCTCAGAAGTAGCA GCAGCAACAGCAGTAGCCGCCGCAGCAGCAGCAGTCGGTAACCCGGACCT TTGTCGCCATGGACGACTCGTTGGTTACTTCTAACCGCGGTACCAACTAC GGACTACAGGACGAACAGGTTTCGTCCGCCCCCGCGATGGACGTGGGGGT AGAATATACCAGTGACGATGACAGCCGGGCACCGCAGACCAAGCAGCAGA AGCTCATCAAGGCCGGGCTGTTTGTACTGCTTCTGGCGATCGTCGTCTAT GTCATCCTAGACTACACGGTGAGAGGAATATAAAACGACAAAACAAGTGA GGTCCTGCTCTTGCTGTTCTCCAATCATCAGAAAGGTGTCTTGTACTTGT AGTCTACACTTCACAAACGCTTGTATATTACACCACAGCAGTGCACGAAA AAAACGCTCGGGGCTGTGCAGCAGCAATAGCAGCAGCAGCAGCAGCAGCA GCACCTGCACCGGTATCTGGAGCACCACCAGGACAACCACCAGCATTACC AACAGCGATAGATCTAGTAGGGTGCTGATCAGCGATTTGGGTGTTGCACC GTGAGAGTTTGAGAAATAACTGCCTCGTATTGTATCTACGATGTAGATGT ACATGAAAGAGCGACCCTGAGACTGCAACATCTCGAATCGGCACTTCGCA GACCGAAGAATGAATCTTGCTCTGTTAGAGTTGCGACATGGGAACGCGAA TCTAGGGACGCCGAACACACCAGCCCTTTGTGGGTCTACATGAATATCGA TCGTACCCACGGTCGAGACGCGGCAAAAGAATAGCACAGCAAGGAACGAG GTGTCAACAGGCTACCTAGTTCACTGCTGGAACGCCGCCTTCCCCGCATC TCGGACCCGATTCTAAAGGTGCTACGAGATGGCAGTTATTGTGGTCGAGT GGTGCACCTTTGGTCTTCACTGCCCCTGTGTGCTCCCTTATCGCCGCGCT CATGACGTGTCTACTTCCCCCCAGTACCTCGCACGCATGAGCCACCGAAC CCGGCATGACAGCAGCATTCGACTGCATGCTGTCCATGCAAAAGGGGTCA CGGACACATCAGCCCATTTATCTTCCTGCCATTCCGGAAACGTAGGTCAC ATGTGCGGCTTGTATTACTCACTTTTGCAAGGCTAGTCTTAAGATCCTTT ACCCCCCGTTACCCTTCCTTGCCACTTCCGCACGCCCAGGTTCCTGGATT AGGCTTCGTTTCCGACGTCCTTACATCGTTCCTCGAGTGGGTGGAGGACA ACCCTGGCCTCGGCGCTATTGCCTTCGCCTTGGTATACGTATTCACCACC GTCGCCTTCATTCCTGGGTCGCTGCTAACGCTTGGCGCGGGGCTTGTGTT TGGCCGTGCGTTGGGAACTGGCTTTGGCGTGCTGGTCGGGACGGTAGCGG TGCTGGTGAGCAAAGACTGCGATGGAACATCTGTCGATGTTTAGCCACTT CATTGCAGAGAGAACTGTTCGCCCGGCGGGATATTCGAGGGCCTATACAA CCGGGACATGCGTGGTGCCGCTGGCATTAGGTCGAGTGTTTTCACGAAAT ACTACTAGACGTTCGATCTCCACGAAAGTTCAGCAGCATACCTTTGCCTT GGCTTCATCGCATGCTGCCTAGACGCATCTGCTGCAATATGTATGTTAAA GGTTATCACAATCCCGGTGTTCCGCCTCGTCATGACTGTGCGTGCGGCTC TCACAGGCAGGTGCCACGGTCGGGGCGATCTTGGCGTTCCTGTTGGGCCG TTTCGTGCTCCAGGAGCAGGCACAAGGACTATTCAACAAGTTCAAGGTTC TTACGGCCGTTAACAGGGCCATCAAATCTCAGGGCTTGAAGCTTGTCATC CTCCTCCGCCTCTCCCCGGTCGTGCCTTTCAGCGCCTTCAACTATGTCAT GTGAGAACTCTCGTGTAGAGCGTTAGATTGTGAAGCACGGACGAGGTCTG TGAACACGCTTGTAGAAGCGAACCTTTCCTTTTCCGCAGGTGTGGAATAT GGATGTGTTTGTCGATTCGGGGAGCTTGCATCAGAACCTCGGTTGATCAT GGGGCAGTCATGTGCACTCGTCCACCTCCCTTCGGAAAGTGCACATGACT GCCATCAGCCCCCACCGCTGCACGAATGCGACGACAACGAGAGAAAATGG TAGAACTCCCCCCTCCTATGTTCAATTGATGGCATGTACCCGAAGAAATA AGAAAACGAAAGAAGCTGATCCCTTGCCCCTTCGCGCGCTTTCTCCTCCT CTGTATTCGCCATGGATCGGCTTGCAGGGGCGTGACCGCGGTCCACTTCC GCGACTATGCACTCGGGTGTGTCGGGTTCATCCCCGGAACCGTGGCCTTC GTATTTATTGGTACTACGGCGTCGGGCTTGCTGGGGGATGATGACGACGA GCAGGAGGAATCATCTGACAGCAACGGCACGGTGCAGCTCATCATTGCCA TCGTGGGGGGTATCGCGACGGTGATAGCGGTCGTTCTGATAAGCATCTAC GCCAAGCGCGCCCTGAATAAGGTTTTGGAGGAGGACAGGATAGAGCAGGA GCGTTTGCAGAGGGACGTAGAGGAAGGCGATTCGGACAGCGTGGAGGGGG GAGGAATGCCCATGGAGCAGTCGGCTAAGGACGGCGCACGACCAACTGCG GTGGGCCACGCCGTTCGGGCGCCGGCCTAATCCTACACTCTGCGGGAGAG AAAAGAGAAAGGGAGAAAAATTGTTTTCCAAGTTGCGTAGCGATCTGGCA TAAGCTTTAGCGGTATTATTTGTCTCATCTTTTTTGCTACTCGTGATACG TGGGGCGGGCTCTTGCCACTGCAGTCTGTAGGCTAGGCTACGCTTGTTTA CGAGAATTCCTTGGAGCTTGCGATCGGTTTCTTGCAAAAATAAATTGAAT ATGCGCAGGCAAGTGTCGACAAGTAGACTATGTTACAGATGCTCTGTGTC GTTTTGGCGTGGTAATGCGCATCGCCAGAAGCCGTAGTCAAAGCTGTAAG ACAACGGGACTTTCATATCACCCCTTCCTTGCCATTCCGGTGCTTTGATT ACTCCATTTTACCTGTTCATTTTGTGGGAAGCCACTAGATGAGGCAACCG ATGAGGTTTAATGAGGTTTCCAGGCCAGGATTGGATTTGCTTTGTGATGA CCGTGGTATGTATTCTGCGCAGAGCGTATTTTACTCGGTGACCTGTTTTG GTCATTGTACAGTATCGTGTACATGTGTGGGTTCAGAATGATTAAACACT GGGAAGTATCTAAGAGACCGCTCGGAGTACGAGTTTCGAATAGTTCACAT AAGGGCCCTAGGTGAGAGCGTGGAGTGGAGGCGGTTGCTATTTGCGTCTG AATTTCAAGCTTCGACACTCCACTCCCTATTCTGCAAATGGATGCGCTGA GCAAGGAGATCTGTATGAGTTTACCGCGCCATATGTTTGCATCCGTGTCT CTTGCTGACAACCAAGATGTACGTTTTTCGACTGCTTGTCTTCGGATACG GCGGGCGGGCTCTCATAATTCCCCTCGGGCCTGTGTATCATTATTGGTAA GAATATAGAGCACGCATGTAGATGGAAGGAAGAAACACTTACGACCGAAA CTTAGATAGCAGAAAGGTTCTAAAGGAAGGTCGGGGTGGTATGTTTGTAG CTGGATCACTGCTGTTGCGACAGGTTTTTGCACCGTGGAAGTTGCAGTGA ACGGGCTCTGATTTCATGTTGCTGAATGTTGGTTCGGGTGGATATCTCGC GTTTTGTGTCGCGATCGGGTGATCGTGCTGCTTTTTTCATGCGTCTGTTG ATCTCTCCTAATCTTGTACCCTTGATCTGGTTGAAGCACGGGGGGAGTGC TAACTACCTACGGGATTGGTTGGTTGATGGAAAAAAGGGGAACGGTGATT TATTTTGAACATCGAAGATAAAAC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1498:12735..16858-

>mRNA_H-canaliculatus_F_contig1498.3740.1 ID=mRNA_H-canaliculatus_F_contig1498.3740.1|Name=mRNA_H-canaliculatus_F_contig1498.3740.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2046bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1498:12735..16858- (Hapterophycus canaliculatus Oshoro5f female)
ATGGACGACTCGTTGGTTACTTCTAACCGCGGTACCAACTACGGACTACA
GGACGAACAGGTTTCGTCCGCCCCCGCGATGGACGTGGGGGTAGAATATA
CCAGTGACGATGACAGCCGGGCACCGCAGACCAAGCAGCAGAAGCTCATC
AAGGCCGGGCTGTTTGTACTGCTTCTGGCGATCGTCGTCTATGTCATCCT
AGACTACACGATGGACGACTCGTTGGTTACTTCTAACCGCGGTACCAACT
ACGGACTACAGGACGAACAGGTTTCGTCCGCCCCCGCGATGGACGTGGGG
GTAGAATATACCAGTGACGATGACAGCCGGGCACCGCAGACCAAGCAGCA
GAAGCTCATCAAGGCCGGGCTGTTTGTACTGCTTCTGGCGATCGTCGTCT
ATGTCATCCTAGACTACACGGTTCCTGGATTAGGCTTCGTTTCCGACGTC
CTTACATCGTTCCTCGAGTGGGTGGAGGACAACCCTGGCCTCGGCGCTAT
TGCCTTCGCCTTGGTATACGTATTCACCACCGTCGCCTTCATTCCTGGGT
CGCTGCTAACGCTTGGCGCGGGGCTTGTGTTTGGCCGTGCGTTGGGAACT
GGCTTTGGCGTGCTGGTCGGGACGGTAGCGGTGCTGGTTCCTGGATTAGG
CTTCGTTTCCGACGTCCTTACATCGTTCCTCGAGTGGGTGGAGGACAACC
CTGGCCTCGGCGCTATTGCCTTCGCCTTGGTATACGTATTCACCACCGTC
GCCTTCATTCCTGGGTCGCTGCTAACGCTTGGCGCGGGGCTTGTGTTTGG
CCGTGCGTTGGGAACTGGCTTTGGCGTGCTGGTCGGGACGGTAGCGGTGC
TGGCAGGTGCCACGGTCGGGGCGATCTTGGCGTTCCTGTTGGGCCGTTTC
GTGCTCCAGGAGCAGGCACAAGGACTATTCAACAAGTTCAAGGTTCTTAC
GGCCGTTAACAGGGCCATCAAATCTCAGGGCTTGAAGCTTGTCATCCTCC
TCCGCCTCTCCCCGGTCGTGCCTTTCAGCGCCTTCAACTATGTCATGCAG
GTGCCACGGTCGGGGCGATCTTGGCGTTCCTGTTGGGCCGTTTCGTGCTC
CAGGAGCAGGCACAAGGACTATTCAACAAGTTCAAGGTTCTTACGGCCGT
TAACAGGGCCATCAAATCTCAGGGCTTGAAGCTTGTCATCCTCCTCCGCC
TCTCCCCGGTCGTGCCTTTCAGCGCCTTCAACTATGTCATGGGCGTGACC
GCGGTCCACTTCCGCGACTATGCACTCGGGTGTGTCGGGTTCATCCCCGG
AACCGTGGCCTTCGTATTTATTGGTACTACGGCGTCGGGCTTGCTGGGGG
ATGATGACGACGAGCAGGAGGAATCATCTGACAGCAACGGCACGGTGCAG
CTCATCATTGCCATCGTGGGGGGTATCGCGACGGTGATAGCGGTCGTTCT
GATAAGCATCTACGCCAAGCGCGCCCTGAATAAGGTTTTGGAGGAGGACA
GGATAGAGCAGGAGCGTTTGCAGAGGGACGTAGAGGAAGGCGATTCGGAC
AGCGTGGAGGGGGGAGGAATGCCCATGGAGCAGTCGGCTAAGGACGGCGC
ACGACCAACTGCGGTGGGCCACGCCGTTCGGGCGCCGGCCTAAGGGCGTG
ACCGCGGTCCACTTCCGCGACTATGCACTCGGGTGTGTCGGGTTCATCCC
CGGAACCGTGGCCTTCGTATTTATTGGTACTACGGCGTCGGGCTTGCTGG
GGGATGATGACGACGAGCAGGAGGAATCATCTGACAGCAACGGCACGGTG
CAGCTCATCATTGCCATCGTGGGGGGTATCGCGACGGTGATAGCGGTCGT
TCTGATAAGCATCTACGCCAAGCGCGCCCTGAATAAGGTTTTGGAGGAGG
ACAGGATAGAGCAGGAGCGTTTGCAGAGGGACGTAGAGGAAGGCGATTCG
GACAGCGTGGAGGGGGGAGGAATGCCCATGGAGCAGTCGGCTAAGGACGG
CGCACGACCAACTGCGGTGGGCCACGCCGTTCGGGCGCCGGCCTAA
back to top