mRNA_H-canaliculatus_F_contig1498.3740.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 1.110e-130 Identity = 235/277 (84.84%), Postives = 248/277 (89.53%), Query Frame = 1
Query: 448 YVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXN-GTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERLQRDVEEGDSDSVEGGGMPMEQSAKDGARPTAVGHAVRAP 1275
YVILDYTVPGLGFV+D LTSFLEWVEDNPGLGA+AFALVYVFTTV FIPGSLLTLGAGLVFGRALGTG G+LVG++AVLAGATVG+ILAFLLGRFVLQEQAQGLFNKFKVL AVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVT V FRDYA+GCVGFIPGTVAFVFIGTTASGLLGD XXXXXXX GTVQLI+ IVGGIATVIAVVLISIYAKRALNKVLEEDR+EQE L+ +E G+ GG MEQSA+DGARP V HAVR P
Sbjct: 57 YVILDYTVPGLGFVADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLLGDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVEQEALEMGLESGN-----GGMNNMEQSAQDGARPAVVEHAVRMP 328
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA) HSP 1 Score: 283 bits (723), Expect = 5.770e-85 Identity = 166/305 (54.43%), Postives = 222/305 (72.79%), Query Frame = 1
Query: 370 DSRAPQTKQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXX------------NGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERLQRDVEEGDSDSVEGGGMPMEQSAKDGARPT 1248
D+ A + K++K+ K L ++L+ +++YVI+DY+VP LG V+ VL+ FL WVEDNP G AFA VY+F TVAFIPGSLLTLGAGLVFGRALG G GV +G+ AV+ GA++GAI+AF+LGR+VLQ+ AQ LFNKFK++ AV++AI+SQGLKL +LLRLSPVVPF+AFNY+MG+TA+ +DY +GC+G IPGTVA+VFIG++ASG+ GD N TV LI+ IVG IATVIAV LIS YAK+ALN++L E +E+ + +D+E + G + ++S KD P+
Sbjct: 13 DTGASKGKKEKIRKLCLGLVLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGI-GDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEENQDGKDLENCE------GKLDEKKSNKDNVEPS 310
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK) HSP 1 Score: 250 bits (638), Expect = 9.910e-73 Identity = 145/258 (56.20%), Postives = 183/258 (70.93%), Query Frame = 1
Query: 391 KQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGT------------VQLIIAIVGGIATVIAVVLISIYAKRALNKVL 1128
++ KLIK GL LL+ I++YV+LDYT+P LG V+ +LTSFL WVE++PG G +AFA VYV TTV FIPGS+LTLGAGLVFGRAL +AFLLGR+VLQ+ AQ LFNKF VL AV++AI+++GL+LVILLRLSPV+PFSAFNYVMG+T V FR Y LGCVG +PGTVA+VFIGT+A+GLLGD XX V +++ +VG ATV+AVVLI++ ++RAL +VL
Sbjct: 44 RKNKLIKFGLLSLLVGIIIYVVLDYTLPSLGHVNRILTSFLLWVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVL 301
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE) HSP 1 Score: 205 bits (522), Expect = 1.180e-55 Identity = 115/242 (47.52%), Postives = 165/242 (68.18%), Query Frame = 1
Query: 502 TSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTV-QLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQ--ERLQRDVEEGDSDSVEGGGMPME 1218
TSF EW+EDNP G + FAL++ +T+ F+PG LLT+GAG+ FGRALG GFGVL G+VAVL GA V ++AF LGR+VL EQAQ ++++L+AVN AI+ G+K++ILLRLSP+VPFS FN++ G+T V RDY LG VG +PGT+AFV+IG + +G + + + ++ IVG +A V+A+V ++IYA+RAL + L E ++ ++ ++ EG + VE G P E
Sbjct: 95 TSF-EWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGEADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELDANADKEEKAEHEGSATDVECGSSPGE 335
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S4JVV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVV3_9STRA) HSP 1 Score: 198 bits (504), Expect = 4.800e-54 Identity = 109/256 (42.58%), Postives = 169/256 (66.02%), Query Frame = 1
Query: 391 KQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERL 1158
++ ++ K L ++L+ +V+VI+D T G ++ D + +FL W+E+NP G F VYV TV F+PG +LTLGAG VF A GTG G+ VGT++V GA++G++LAFL+ R++L+E A GL KF + A+++A++ +GLK++ILLRLSPV+PF+A NYV GVTAV F+DY+L +PGT+ +VF+G +A L + + + +VG + ++AV L S YAK+ LNK+L+++ ER+
Sbjct: 12 RRSRIKKLVLALVLIGFIVFVIIDSTTNG--YIKDGIQTFLRWIEENPIEGFFMFMGVYVLATVLFVPGLILTLGAGYVFSNAFGTGLGLFVGTISVFVGASLGSMLAFLISRYILREWAVGLTEKFPIFRAIDQALEEKGLKIIILLRLSPVIPFNALNYVCGVTAVSFKDYSLALFAMLPGTILYVFLGASAQSLA------TIGSSTDSKALTISTVVVGVVLGIVAVALSSRYAKKELNKILDQEEEANERI 259
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S2A6Q3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Q3_TRICV) HSP 1 Score: 190 bits (482), Expect = 1.930e-50 Identity = 108/276 (39.13%), Postives = 174/276 (63.04%), Query Frame = 1
Query: 340 DVGVEYTSDDDSRAPQT------KQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQ 1149
D+ +++ DD+ P+ K+ L K + ++L+ ++V++I+D G FV + L+W+E+NP G F VY TV F+PGSLLTLG+G VF + G GFGVL+ T+AV GAT+GA++AF+LGR++L++ + L K+ V A+++A++ +GL+++ILLRLSP++PF+A NY+ GVT+V F+ YA +PGT+ FVF+G +A L+ V + +VG + VIA+ L S YAK+ LNK+LE+++ ++
Sbjct: 17 DILIDHGGDDNDSWPKEVKACTDKRALLNKIIVGLVLVGLIVFIIVDSVTHG--FVKGAIEGLLQWIEENPIRGLFVFMAVYFVATVLFVPGSLLTLGSGFVFAESFGLGFGVLLATLAVFVGATLGALVAFILGRYLLRDWVENLTKKYNVFRAIDKALEEKGLRIMILLRLSPIIPFNALNYICGVTSVSFKHYAWANFAILPGTILFVFLGASAGSLVDSGNGGDTP------VVTIATIVVGVVFGVIAIALTSRYAKKELNKILEQEKTDE 284
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA) HSP 1 Score: 188 bits (478), Expect = 3.960e-50 Identity = 111/294 (37.76%), Postives = 179/294 (60.88%), Query Frame = 1
Query: 376 RAPQTKQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERLQRDVEE-GDSDSVEGGGMPMEQSAKDGARPTAV 1254
+A + ++ +LIK L +LL+ ++YVI+D+ + + SFL W+EDNP G AF VY T+ F PG +LTLGAG VF ALG G GV++ T AV GA+ G++ AFL+GR++L++ GL K+ + AV+ A+K +GL+++ILLRLSP++PF+A NY++GVT+V FRD+ + +G +PGT+ +VF+G++A L N V+++ ++G + ++ V + S YA++ L V+ R E E Q +VE+ GD + M + +S + G +
Sbjct: 21 QAREKRKARLIKIALGLLLVGFIIYVIVDFATSK--HLRTAMESFLNWIEDNPTEGVFAFMGVYFVATILFAPGLILTLGAGFVFANALGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLGSSAGSLTDSSSGGD------NSAVRILTIVLGSVFGILGVCVTSYYARKELQNVIS--RREAEAAQLEVEDIGDKEMDSMLRMEVGESTESGENQNGI 304
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A0G4EY60_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EY60_VITBC) HSP 1 Score: 187 bits (476), Expect = 1.760e-49 Identity = 115/246 (46.75%), Postives = 160/246 (65.04%), Query Frame = 1
Query: 409 KAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIE 1146
K +F++++AI+VY+I+D T V++ L F EWV+DNP G +A+ VY+ TVAFIPGS+LTLGAG F A G G G+ G AVL GA VGA LAF GRF+ + QGL +KFKV+ A+++ ++QGLKL ILLRLSPVVPFSAFNY+MG T +RDYA+G +G IPGT +V+IG + G + Q + VG +AT IAV +++ +A++AL ++ E++ E
Sbjct: 55 KLLVFLVIIAIIVYIIIDSTTGQR--VAEGLDIFKEWVQDNPATGILAYMAVYMVCTVAFIPGSILTLGAGFTFVCAFGNGPGMAAGIGAVLVGAFVGAQLAFFCGRFLFKSWVQGLTDKFKVMRAIDKVFETQGLKLNILLRLSPVVPFSAFNYIMGGTRTRYRDYAIGTLGIIPGTALYVYIGAIPA-FAGACSGKAEGSGHWS---QWVFLAVGLVATFIAVFIVTWFARKALREITEKEAAE 294
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: D7G9F3_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F3_ECTSI) HSP 1 Score: 184 bits (467), Expect = 6.270e-49 Identity = 92/163 (56.44%), Postives = 126/163 (77.30%), Query Frame = 1
Query: 502 TSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGD 990
TSF +W+EDNP G + FAL++ +T+ F+PG LLT+GAG+ FGRALG GFGVL G+VAVL GA V ++AF LGR+VL EQAQ ++++L+AVN AI+ G+K++ILLRLSP+VPFS FN++ G+T V RDY LG VG +PGT+AFV+IG + +G + +
Sbjct: 95 TSF-DWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNE 256
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Match: A0A7S1CUZ4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CUZ4_CYCTE) HSP 1 Score: 187 bits (474), Expect = 1.240e-48 Identity = 119/276 (43.12%), Postives = 173/276 (62.68%), Query Frame = 1
Query: 352 EYTSDDDSRAPQTKQQKLIKAGLFVLLLAIVVYVILDYTVPGLGFVSDVLTSFLEWVEDNPGLGAIAFALVYVFTTVAFIPGSLLTLGAGLVFGRALGTGFGVLVGTVAVLAGATVGAILAFLLGRFVLQEQAQGLFNKFKVLTAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTAVHFRDYALGCVGFIPGTVAFVFIGTTASGLLGDXXXXXXXXXXXNGTVQLIIAIVGGIATVIAVVLISIYAKRALNKVLEEDRIEQERLQRDVEEG 1179
E T DD+ R Q KQ K + + LL ++YV++D G V + SFL W+E+NP G AF +VY T+ F+PGSLLTLG+G VF A G G GVL+G+++V GA+ GAI+AFLLGR++L+E QGL K+ V A++ A++ +G +++ LLRLSP++PF+A NY+ GVTA+ F AL + IPGTV +VF+G +A G L D +G + +I+ +VG + + A+ L S YAK+ LN+V+ IE+E + EEG
Sbjct: 122 EETEDDEGR--QRKQNCWQKLVIGIFLLGFIIYVVIDSFTAG--NVRSAIGSFLTWIENNPIPGFFAFMVVYFVATILFVPGSLLTLGSGFVFANAFGLGPGVLIGSLSVFLGASSGAIVAFLLGRYLLREWVQGLTKKYAVFEALDIALEEKGFRIMALLRLSPIIPFNAINYIGGVTAISFYANALALIVIIPGTVLYVFLGASA-GSLADSASSGE-----SGPITIIVVVVGCVFGLAAIFLTSYYAKKELNRVI----IERETKELMTEEG 383 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1498.3740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1498.3740.1 >prot_H-canaliculatus_F_contig1498.3740.1 ID=prot_H-canaliculatus_F_contig1498.3740.1|Name=mRNA_H-canaliculatus_F_contig1498.3740.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=341bp MDDSLVTSNRGTNYGLQDEQVSSAPAMDVGVEYTSDDDSRAPQTKQQKLIback to top mRNA from alignment at H-canaliculatus_F_contig1498:12735..16858- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1498.3740.1 ID=mRNA_H-canaliculatus_F_contig1498.3740.1|Name=mRNA_H-canaliculatus_F_contig1498.3740.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4124bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1498:12735..16858- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1498:12735..16858- >mRNA_H-canaliculatus_F_contig1498.3740.1 ID=mRNA_H-canaliculatus_F_contig1498.3740.1|Name=mRNA_H-canaliculatus_F_contig1498.3740.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2046bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1498:12735..16858- (Hapterophycus canaliculatus Oshoro5f female)back to top |