mRNA_H-canaliculatus_F_contig14833.3662.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: A0A6H5L0I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I8_9PHAE) HSP 1 Score: 169 bits (427), Expect = 3.330e-47 Identity = 84/103 (81.55%), Postives = 91/103 (88.35%), Query Frame = 1
Query: 7 KTKGFRRAEAMLALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLWYV 315
+ K R+AEAML LVLPSGFP SV PY AYAGWQF GM ASAAAGVMSTQALLYAMG+G GA+PLAATLNWVIKDGLGQLGGVAF+SLV+TRFDANPKLW +
Sbjct: 162 EAKAVRKAEAMLGLVLPSGFPGSVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGVGVGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRI 264
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: D8LJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS3_ECTSI) HSP 1 Score: 162 bits (409), Expect = 1.550e-45 Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 1
Query: 37 MLALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLWYV 315
ML LVLPSGFP SV PY AYAGWQF GM ASAAAGVMSTQALLYAMGLGAGA+PLAATLNWVIKDGLGQLGGVAF+SLV+TRFDANPKLW V
Sbjct: 1 MLGLVLPSGFPASVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGLGAGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRV 93
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: A0A835YUA2_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA2_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.530e-36 Identity = 64/90 (71.11%), Postives = 79/90 (87.78%), Query Frame = 1
Query: 40 LALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLW 309
LA +LP+G+P++V Y +Y GWQF M+ S+AAGV+STQALL+A+GLG+GAIPLAA LNWVIKDGLGQLGGV F+S+V+TRFDANPKLW
Sbjct: 1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLW 90
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: A0A835YMG5_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG5_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.390e-36 Identity = 63/102 (61.76%), Postives = 83/102 (81.37%), Query Frame = 1
Query: 4 PKTKGFRRAEAMLALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLW 309
P+ + ++A +LP+G+PDSVR Y Y WQ + M+ ++AAGV+STQALL+A+GLGAGA+PLAA LNWV+KDGLGQLGG+AF++LVNTRFDANPK+W
Sbjct: 70 PRGRAADAVRGLVATILPAGYPDSVRPGYARYVRWQLSSMVCTSAAGVLSTQALLHAVGLGAGAVPLAAALNWVVKDGLGQLGGIAFSALVNTRFDANPKMW 171
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: W7TSK4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSK4_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.960e-29 Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 31 EAMLALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLW 309
E L +LP G+P SV+ Y Y Q +AS+A GV+STQ+LLYAMGLGAGAIPLAA LNW+IKDG+GQ+GG+ F S+VN RFDANPK W
Sbjct: 109 EDALRALLPRGYPRSVQKGYVEYVKLQMTASLASSAVGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIVFASVVNDRFDANPKRW 201
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: T0RLK8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RLK8_SAPDV) HSP 1 Score: 115 bits (287), Expect = 5.210e-28 Identity = 61/108 (56.48%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 4 PKTKGFRRAEAMLA----LVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLWYV 315
P T RRA+ + L LP + S H Y YA WQF G +A A GV+S Q+LLYA+GL +GAIP+AA LNWVIKDGLGQ GGV F SLVN RFD++PK W V
Sbjct: 63 PTTDVLRRAQQLPHYLEDLFLPRDYKTSTTHDYLPYAKWQFVGSVAGTACGVLSMQSLLYAIGLQSGAIPMAAALNWVIKDGLGQFGGVLFASLVNHRFDSDPKRWRV 170
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: A0A5D6YB24_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB24_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.030e-27 Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 22 RRAEAMLALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLW 309
R AE + L LP SV Y YA W F G +ASAA+GV+S Q+LLYA+GLGAG+IP AA +NWV+KDGLGQ GGV F SLVN R+DA+PK W
Sbjct: 64 RAAEFLWDLFLPKDAATSVSKDYFPYAKWYFVGSIASAASGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVLFASLVNNRYDADPKRW 159
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: A0A5A8CKM9_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKM9_CAFRO) HSP 1 Score: 114 bits (286), Expect = 1.310e-27 Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 37 MLALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLW 309
+L VLP G+P SV Y YA W G ASAAAGV+S QALL+A+G GAGA+P+AA L WV+KDGLGQLGGV F S VNTRFD++ K W
Sbjct: 83 VLRHVLPQGYPVSVAPSYAQYAAWSAVGSTASAAAGVLSMQALLHAVGAGAGAVPMAAALQWVVKDGLGQLGGVLFVSFVNTRFDSDAKRW 173
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: A0A067C7I2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C7I2_SAPPC) HSP 1 Score: 113 bits (283), Expect = 1.880e-27 Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 46 LVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLWYV 315
L LP + S H Y YA WQF G +A A GV+S Q+LLYA+GL +GAIP+AA LNWVIKDGLGQ GGV F SLVN RFD++PK W V
Sbjct: 82 LFLPRDYQTSTTHDYLPYAKWQFVGSVAGTACGVLSMQSLLYAIGLQSGAIPMAAALNWVIKDGLGQFGGVLFASLVNHRFDSDPKRWRV 171
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Match: A0A2D4BQ69_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ69_PYTIN) HSP 1 Score: 113 bits (282), Expect = 3.600e-27 Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 1
Query: 22 RRAEAMLALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMSTQALLYAMGLGAGAIPLAATLNWVIKDGLGQLGGVAFTSLVNTRFDANPKLWYV 315
R + + L LP F SV Y YA W F G +ASAA+GV+S Q+LLYA+GLGAG+IP AA +NWV+KDGLGQ GGV F S+VN R+DA+PK W V
Sbjct: 132 RAIDFLSDLFLPRDFRRSVTPDYFPYAKWYFVGTVASAASGVLSMQSLLYAIGLGAGSIPTAAAINWVLKDGLGQFGGVMFASIVNNRYDADPKRWRV 229 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14833.3662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14833.3662.1 >prot_H-canaliculatus_F_contig14833.3662.1 ID=prot_H-canaliculatus_F_contig14833.3662.1|Name=mRNA_H-canaliculatus_F_contig14833.3662.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=109bp FPKTKGFRRAEAMLALVLPSGFPDSVRHPYTAYAGWQFAGMMASAAAGVMback to top mRNA from alignment at H-canaliculatus_F_contig14833:897..1996- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14833.3662.1 ID=mRNA_H-canaliculatus_F_contig14833.3662.1|Name=mRNA_H-canaliculatus_F_contig14833.3662.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1100bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14833:897..1996- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14833:897..1996- >mRNA_H-canaliculatus_F_contig14833.3662.1 ID=mRNA_H-canaliculatus_F_contig14833.3662.1|Name=mRNA_H-canaliculatus_F_contig14833.3662.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=654bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14833:897..1996- (Hapterophycus canaliculatus Oshoro5f female)back to top |