mRNA_H-canaliculatus_F_contig1466.3575.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1466.3575.1
Unique NamemRNA_H-canaliculatus_F_contig1466.3575.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: D7FRN2_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN2_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 1.610e-155
Identity = 237/268 (88.43%), Postives = 255/268 (95.15%), Query Frame = 1
Query:    1 VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERLSRHMSRNQLIRLNWWQRLTAGVHPNILSYCPQDNNHGMFVPPSTITHQVVVCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSYAGSSAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKTKPFPLVFYGIQ 804
            VPYIIFGPPGTGKTCTVIE+ILQLVKL+PE RILA GPSDT+ADVICERLSRHMSR+QL+R+NWWQRLTAGVHPNILSYCPQD+N GMFVPPSTITHQVVVCTCGTAGMLS+LGVD+ YFTHIFVDESSNAMETELLVPLSYAG  AQIILCGDPRQLGAAVRSP+ARALGLEVSLQERLM QEMYSKHA+ P ALS++T+ GA+ VRCMTQLLNNYRAHEVLLTLPSAMFYGG+LVRSAERSQTDSML WEELP+TK FPL+FYGIQ
Sbjct:  773 VPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAVGPSDTSADVICERLSRHMSRDQLVRINWWQRLTAGVHPNILSYCPQDSNRGMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGR-AQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHAQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLTWEELPETKAFPLLFYGIQ 1039          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: A0A6H5KSW5_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW5_9PHAE)

HSP 1 Score: 417 bits (1071), Expect = 1.430e-136
Identity = 202/234 (86.32%), Postives = 222/234 (94.87%), Query Frame = 1
Query:  103 ACGPSDTAADVICERLSRHMSRNQLIRLNWWQRLTAGVHPNILSYCPQDNNHGMFVPPSTITHQVVVCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSYAGSSAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKTKPFPLVFYGIQ 804
            A GPSDT+ADVICERLSRHMSR+QL+R+NWWQRLTAGVHPNILSYCPQD+NHGMF+PPSTITHQVVVCTCGTAGMLS+LGVD+ YFTHIFVDESSNAMETELLVPLSYAG  AQIILCGDPRQLGAAVRSP+ARALGLEVSLQERLM ++MYSKHA+ P ALS++T+  A+ VRCMTQLLNNYRAHEVLLTLPSAMFYGG+LVRSAERSQTDSML WEELP+TK FPL+FYG+Q
Sbjct:  505 AVGPSDTSADVICERLSRHMSRDQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFLPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGR-AQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEKDMYSKHAKAPTALSSATSNEATDVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLTWEELPETKAFPLLFYGVQ 737          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: A0A4D9D490_9STRA (RNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D490_9STRA)

HSP 1 Score: 231 bits (589), Expect = 6.360e-66
Identity = 130/310 (41.94%), Postives = 178/310 (57.42%), Query Frame = 1
Query:    1 VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERLSRHMSRNQLIRLNWWQRLTAGVHPNILSYCPQDNNHGMFV-----PPSTITHQVVVCTCGTAGMLSML---GVDDTYFTHIFVDESSNAMETELLVPLSYAGSSAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLM---------------GQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKT---------------------KPFPLVFYG 798
            +PYI++GPPGTGKT TVIE ILQ+ +  P S++LA  PSD AAD++ ERLS HM   QL RLNW QRL A + P++L Y   D    +F      P S + HQV+V TC ++G+LS+L   G     F+HI VDE+S A++ E++VPLS AG    ++L GDP+QLGA  R+P  + LGL  SLQERLM                 E   +H +     +++   G  G RC+T L  NYR+H+ ++ +PS MFY  TL +  ++S  DSML WE LP +                     K FP++F+G
Sbjct:  538 LPYILYGPPGTGKTLTVIEAILQICRHHPRSKVLAVAPSDVAADILAERLSEHMEPKQLFRLNWCQRLMASMKPSLLRYSCWDAKVSLFSLPDDEPRSILEHQVIVSTCASSGLLSLLDISGQTPVSFSHILVDEASQALQPEVMVPLSLAGPDTGVVLAGDPKQLGAVTRNPLVQELGLARSLQERLMETCSIYRTQLAAEASATEGGVEHPKGSEHRTSAPKEGDPG-RCLTMLRKNYRSHQAIIEVPSRMFYDRTLEQHGDKSVIDSMLAWEMLPGSSSATALDTAPLRSTARAQAGPKGFPILFWG 846          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: A0A835YTD6_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD6_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.140e-61
Identity = 133/326 (40.80%), Postives = 171/326 (52.45%), Query Frame = 1
Query:    1 VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERLSRHMSRNQLIRLNWWQRLTAGVHPNILSYCPQDNNHGMFVPPST--ITHQVVVCTCGTAGMLSMLGV-----------------------DDTYFTHIFVDESSNA-----------METELLVPLSYAGSSAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKH--AETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKT--------------------KPFPLVFYGIQ 804
            +PYIIFGPPGTGKT T+ E  LQ++    ++R+L C PSD AADV+  RL+ H++  Q++RL WWQR T  +  ++L YC  D    +   P+    ++QV+V TCG AG ++ML                             FTHIF DESS A           +E ELLVPL+ A     IIL GDPRQLGA VRSP A  LGL  SLQERLM   +Y      E    L+ S       +RC +QL +NYR+H VLL +PS +FY GTLV  A++   +S+ +WE LP                        FPL  YGIQ
Sbjct: 1103 LPYIIFGPPGTGKTMTMTEAALQVLIHTRDARVLVCAPSDAAADVVARRLAPHLTPQQMLRLCWWQRPTESLPSSLLQYCCIDPTVSLLALPTEPLSSYQVIVTTCGAAGQIAMLSELQQQRSDSSEHEAWWPIAAALPQQRPRFTHIFCDESSQAKGADLRVRKEALEAELLVPLALASDDTSIILAGDPRQLGATVRSPLAARLGLGTSLQERLMALPLYGAEDGGEDMETLAAS-------MRCYSQLTSNYRSHRVLLEVPSRLFYRGTLVERADKQLVESLCEWEGLPPVVRQRQEGQDGEEGGEEGGGPAHFPLFMYGIQ 1421          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: A7RTX4_NEMVE (RNA helicase (Fragment) n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RTX4_NEMVE)

HSP 1 Score: 206 bits (524), Expect = 2.900e-60
Identity = 117/270 (43.33%), Postives = 165/270 (61.11%), Query Frame = 1
Query:    4 PYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERLSRH--MSRNQLIRLNWWQRLTAGVHPNILSYCPQDNNHGMFVPPSTITHQVVVCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSYA-GSSAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKTKPFPLVFYGIQ 804
            PY++FGPPGTGKT T++E ILQ+    P SR++AC PS++AAD++  RL R   +    +IRLN +QR+   +  +I  YC   ++  +        ++++VCTC TAG L  LG+   +FTH+FVDE+  A E E L+P+  A G   QIIL GDP QLG  +RSP A + GL VSL ERLM   +Y++        +     G      +T+L+NNYR+H  LL LPSA+FY   L   AER+  + + QWE LP T+  PLVF+G++
Sbjct:   36 PYLLFGPPGTGKTVTLVEAILQVFHRVPSSRVIACAPSNSAADLMAVRLHRSGFIQEGDMIRLNAFQRVQE-IPESINKYCVDTDSLQL-----AAHYRIIVCTCSTAGQLFSLGLKPGHFTHVFVDEAGQATEPECLIPIGLAAGEDGQIILAGDPFQLGPVLRSPVAISYGLNVSLLERLMSGLLYARDE------TRFVDHGCYDPLLVTKLVNNYRSHPSLLRLPSALFYHSELRVCAERTMREQLSQWEMLP-TQGTPLVFHGLK 292          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: A0A6I9NKT8_9TELE (putative helicase Mov10l1 isoform X1 n=11 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9NKT8_9TELE)

HSP 1 Score: 211 bits (538), Expect = 8.560e-59
Identity = 117/273 (42.86%), Postives = 161/273 (58.97%), Query Frame = 1
Query:    1 VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERL--SRHMSRNQLIRLNWWQRLTAGVHP--NILSYCPQDNNHGMFVPPSTITHQVVVCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSYAGS-SAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKTKPFPLVFYGIQ 804
            +PY++FGPPGTGKT TVIE ILQ+    P SR+L C PS++AAD+IC RL  S  +    L R+N   R    +     + S   +D  H  F       H++VV TC ++GM   +G+   +FTH+F+DE+  A E E L+P+SY      Q++L GDP QLG  V+S  A A GL VSL ERLM   +Y++H                  + +T+L+ NYR+HE LLTLPS +FY G L   A+R   DS+ QW+ LPK K FPL+F+G++
Sbjct:  733 IPYVLFGPPGTGKTITVIEAILQVYHFLPSSRVLVCTPSNSAADLICTRLHHSGFLHAASLARVNPTSRQEESIPEALRVYSKAGEDIRHASF-------HRIVVSTCSSSGMFHNIGIQVGHFTHVFLDEAGQATEPESLIPMSYLSERDGQVVLAGDPCQLGPVVKSKLATAFGLGVSLMERLMANPLYARHD------------WGYNPKLVTKLIFNYRSHEALLTLPSKLFYKGELCFKAQRDVVDSLCQWKTLPK-KEFPLLFHGVR 985          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: A0A6P7TU24_OCTVU (RNA helicase n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7TU24_OCTVU)

HSP 1 Score: 209 bits (532), Expect = 9.640e-59
Identity = 116/271 (42.80%), Postives = 167/271 (61.62%), Query Frame = 1
Query:    1 VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERLSRH--MSRNQLIRLNWWQRLTAGVHPNILSYCPQDNNHGMFVPPSTITHQVVVCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSY-AGSSAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKTKPFPLVFYGIQ 804
            +PYI+FGPPGTGKT T++ETILQ++   P SRILAC PS++AAD++ ERL +   +    ++RLN +QR    +   I  YC   NN  + V      +++++ TC  +G+L   G+   +FTH+F+DE+  A E E L+P+   AG+  Q IL GDP QLG  + SP A++ GLE+S  ERLMG E+YS+  ET    S     G      +T+L+ NYR+H  LL LPS +FY   L   AE++ T S+  W+ LP  K  P++F+GI+
Sbjct:  391 MPYILFGPPGTGKTITLVETILQILTKLPGSRILACAPSNSAADLLAERLHKSGVLKLTDMVRLNAFQRNEDNIPDKIRPYCSSGNNLDIVVH-----YRIIISTCVNSGILYTYGLKPGHFTHVFIDEAGQATEPECLIPVGLVAGTDGQTILSGDPEQLGPILHSPHAKSHGLELSFLERLMGLELYSRD-ETKFVTS-----GYFDPMLVTKLIYNYRSHPALLQLPSVLFYANELEVKAEKTLTHSLCGWKSLPN-KTVPILFHGIR 649          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: A0A4Z2C875_9TELE (Uncharacterized protein n=1 Tax=Takifugu bimaculatus TaxID=433685 RepID=A0A4Z2C875_9TELE)

HSP 1 Score: 206 bits (523), Expect = 1.170e-58
Identity = 117/274 (42.70%), Postives = 163/274 (59.49%), Query Frame = 1
Query:    1 VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERL--SRHMSRNQLIRLNWWQRLTAGVHPNIL---SYCPQDNNHGMFVPPSTITHQVVVCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSYAGS-SAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKTKPFPLVFYGIQ 804
            +PY++FGPPGTGKT T+IETILQ+    P SR+L C PS++AAD+IC RL  S  +    L R+N   R    + P +L   S   +D  H  +       H++VV TC +AG+   +GV   +FTH+F+DE+  A E E L+P+++      QI+L GDP QLG  ++S  A A GL VS+ ERLM   +YS+H                  R +T+L+ NYR+HE LL LPS +FY G L   A R+  DS+ QW+ LPK K FPL+F+G++
Sbjct:  180 LPYVLFGPPGTGKTITLIETILQVYHFLPNSRVLVCTPSNSAADLICLRLHQSGFLHAASLARVNASCRQEESI-PEVLRLYSKAGEDVRHASY-------HRIVVSTCSSAGLFHNIGVQVGHFTHVFLDEAGQATEPEALIPIAFISERDGQIVLAGDPCQLGPVIKSKIAAAFGLGVSMLERLMANPLYSRHD------------WGYNPRLVTKLVYNYRSHEALLVLPSKLFYRGELCVRAPRAVVDSLCQWKSLPK-KGFPLIFHGVR 432          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: A0A433SVW3_ELYCH (RNA helicase n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SVW3_ELYCH)

HSP 1 Score: 210 bits (534), Expect = 2.070e-58
Identity = 122/271 (45.02%), Postives = 166/271 (61.25%), Query Frame = 1
Query:    1 VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERL--SRHMSRNQLIRLNWWQRLTAGVHPNILSYCPQDNNHGMFVPPSTITHQVVVCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSY-AGSSAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKTKPFPLVFYGIQ 804
            VPYIIFGPPGTGKT TV+E ILQ++K  P SRI+AC PS++AAD+I ERL  S  +S+ +++RLN +QR    +  +IL YC   N+       S    +V+V TC  AG +  LG+   + TH+FVDE   A E E L+P+   +G+  QIIL GDP+QLG  + SP A+  GLE+SL ERLM +E+Y +  E           G      +T L+NNYR+H  +L LPS +FY   L   A+ S T ++  W  LPK   FP+VF+GI+
Sbjct:  587 VPYIIFGPPGTGKTITVVEAILQVLKRVPSSRIVACTPSNSAADLIAERLHLSGQVSQTEMVRLNAFQRSCDSLPESILKYCRFANDL-----ESISRFRVIVSTCVMAGNMYGLGLSAGHLTHVFVDECGQATEPECLIPVGLVSGTDGQIILAGDPKQLGPIIASPFAKMYGLEMSLLERLMSRELYQRDEEK------FGENGGFDPSLVTMLVNNYRSHPAILELPSRLFYYSQLRPHADPSLTHTLAGWSLLPKGG-FPVVFHGIR 845          
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Match: UPI000C6FB1BD (RNA helicase Mov10l1-like n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6FB1BD)

HSP 1 Score: 202 bits (513), Expect = 2.260e-58
Identity = 120/274 (43.80%), Postives = 160/274 (58.39%), Query Frame = 1
Query:    1 VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERL--SRHMSRNQLIRLNWWQRLTAGVHPNIL---SYCPQDNNHGMFVPPSTITHQVVVCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSYAGS-SAQIILCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTSTARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQWEELPKTKPFPLVFYGIQ 804
            +PY++FGPPGTGKT T+IE ILQ+    P SRIL C PS++AAD+IC RL  S  +    L R+N   R    V P +L   S   +D  H  F       H++VV TC +AGM   +G+   +FTH+F+DE+  A E E L+P+S       QI+L GDP QLG  V+S  A A GL VSL ERLM   +YS+                   + +T+L+ NYR+HE LL LPS +FY G L   A R+  DS+ QW+ LPK K FPL+F+G++
Sbjct:   50 IPYVLFGPPGTGKTVTLIEAILQVYHFLPSSRILVCTPSNSAADLICVRLHHSGFLHAASLARVNASCRQDESV-PEVLRPYSRAGEDIRHASF-------HRIVVSTCSSAGMFHNIGLQVGHFTHVFLDEAGQATEPESLIPMSLVSERDGQIVLAGDPCQLGPIVKSKLAAAFGLGVSLLERLMANPLYSRQD------------WGYNPKLVTKLIYNYRSHESLLMLPSKLFYQGELCFKAPRAVVDSLCQWKNLPK-KGFPLLFHGVR 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1466.3575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRN2_ECTSI1.610e-15588.43RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5KSW5_9PHAE1.430e-13686.32RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A4D9D490_9STRA6.360e-6641.94RNA helicase n=1 Tax=Nannochloropsis salina CCMP17... [more]
A0A835YTD6_9STRA1.140e-6140.80RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A7RTX4_NEMVE2.900e-6043.33RNA helicase (Fragment) n=3 Tax=Nematostella vecte... [more]
A0A6I9NKT8_9TELE8.560e-5942.86putative helicase Mov10l1 isoform X1 n=11 Tax=Noto... [more]
A0A6P7TU24_OCTVU9.640e-5942.80RNA helicase n=1 Tax=Octopus vulgaris TaxID=6645 R... [more]
A0A4Z2C875_9TELE1.170e-5842.70Uncharacterized protein n=1 Tax=Takifugu bimaculat... [more]
A0A433SVW3_ELYCH2.070e-5845.02RNA helicase n=1 Tax=Elysia chlorotica TaxID=18847... [more]
UPI000C6FB1BD2.260e-5843.80RNA helicase Mov10l1-like n=1 Tax=Seriola lalandi ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1466contigH-canaliculatus_F_contig1466:20631..25621 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score486.9
Seed ortholog evalue6.1e-135
Seed eggNOG ortholog2880.D7FRN2
KEGG rclassRC00379,RC00444,RC00445
KEGG koko:K01756,ko:K13983,ko:K18422
KEGG ReactionR01083,R04559
KEGG Pathwayko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130
KEGG ModuleM00048,M00049
EggNOG free text desc.helicase activity
EggNOG OGsCOG1112@1,KOG1804@2759
EC3.6.4.13,4.3.2.2
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Exons7
Model size804
Cds size804
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929213.5993285-CDS-H-canaliculatus_F_contig1466:20630..207321622929213.5993285-CDS-H-canaliculatus_F_contig1466:20630..20732Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 20631..20732 +
1696845720.5074503-CDS-H-canaliculatus_F_contig1466:20630..207321696845720.5074503-CDS-H-canaliculatus_F_contig1466:20630..20732Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 20631..20732 +
1622929213.6198258-CDS-H-canaliculatus_F_contig1466:21507..216511622929213.6198258-CDS-H-canaliculatus_F_contig1466:21507..21651Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 21508..21651 +
1696845720.523914-CDS-H-canaliculatus_F_contig1466:21507..216511696845720.523914-CDS-H-canaliculatus_F_contig1466:21507..21651Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 21508..21651 +
1622929213.6349485-CDS-H-canaliculatus_F_contig1466:22413..225181622929213.6349485-CDS-H-canaliculatus_F_contig1466:22413..22518Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 22414..22518 +
1696845720.5337446-CDS-H-canaliculatus_F_contig1466:22413..225181696845720.5337446-CDS-H-canaliculatus_F_contig1466:22413..22518Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 22414..22518 +
1622929213.6485147-CDS-H-canaliculatus_F_contig1466:23396..235161622929213.6485147-CDS-H-canaliculatus_F_contig1466:23396..23516Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 23397..23516 +
1696845720.5432565-CDS-H-canaliculatus_F_contig1466:23396..235161696845720.5432565-CDS-H-canaliculatus_F_contig1466:23396..23516Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 23397..23516 +
1622929213.666009-CDS-H-canaliculatus_F_contig1466:24305..243651622929213.666009-CDS-H-canaliculatus_F_contig1466:24305..24365Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 24306..24365 +
1696845720.5535898-CDS-H-canaliculatus_F_contig1466:24305..243651696845720.5535898-CDS-H-canaliculatus_F_contig1466:24305..24365Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 24306..24365 +
1622929213.6842613-CDS-H-canaliculatus_F_contig1466:24765..248571622929213.6842613-CDS-H-canaliculatus_F_contig1466:24765..24857Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 24766..24857 +
1696845720.564064-CDS-H-canaliculatus_F_contig1466:24765..248571696845720.564064-CDS-H-canaliculatus_F_contig1466:24765..24857Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 24766..24857 +
1622929213.697392-CDS-H-canaliculatus_F_contig1466:25440..256211622929213.697392-CDS-H-canaliculatus_F_contig1466:25440..25621Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 25441..25621 +
1696845720.573784-CDS-H-canaliculatus_F_contig1466:25440..256211696845720.573784-CDS-H-canaliculatus_F_contig1466:25440..25621Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 25441..25621 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1466.3575.1prot_H-canaliculatus_F_contig1466.3575.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1466 20631..25621 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1466.3575.1

>prot_H-canaliculatus_F_contig1466.3575.1 ID=prot_H-canaliculatus_F_contig1466.3575.1|Name=mRNA_H-canaliculatus_F_contig1466.3575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=268bp
VPYIIFGPPGTGKTCTVIETILQLVKLKPESRILACGPSDTAADVICERL
SRHMSRNQLIRLNWWQRLTAGVHPNILSYCPQDNNHGMFVPPSTITHQVV
VCTCGTAGMLSMLGVDDTYFTHIFVDESSNAMETELLVPLSYAGSSAQII
LCGDPRQLGAAVRSPSARALGLEVSLQERLMGQEMYSKHAETPRALSTST
ARGASGVRCMTQLLNNYRAHEVLLTLPSAMFYGGTLVRSAERSQTDSMLQ
WEELPKTKPFPLVFYGIQ
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mRNA from alignment at H-canaliculatus_F_contig1466:20631..25621+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1466.3575.1 ID=mRNA_H-canaliculatus_F_contig1466.3575.1|Name=mRNA_H-canaliculatus_F_contig1466.3575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4991bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1466:20631..25621+ (Hapterophycus canaliculatus Oshoro5f female)
GTGCCGTACATCATTTTCGGCCCGCCTGGTACCGGTAAAACCTGCACCGT CATAGAGACCATCCTCCAACTCGTCAAGCTCAAGCCCGAGAGCCGAATAC TGGTACGCGACTAGCCCGCCTCGTTCCCGCTTGCGGGCAGAAACAGAGCA GACTTTATTTTTTGCCGCTTTTCTCGTGCTTCAGTACTGTATGCTTCTCT TTTTTTTTCGTGTAGACAAGGGGAGCACCTCAAAATCACCGTGTCCCCCC CCCCTCCCCCGGCAAGAGGAGCGGAGGTGTTGTTTCGCACGCATGTGGAA CGTTGCGGAGGTTCTTTTGGTCGGGTGCATTGCGACTACGAGCCTGTCCC CTGTCTTTCCGTGTGTACTGGACAGCAGTAGCAGGAGTAGCAGCAGGAGG GCCGTTGGAGTGAAACTGCGACGCGAGGGCGGTGATTTCGTCGCACGACA TTATTTTACTCCATTTGTTCTGCGCCACCGGTCGCCATTGAAAGTGAGCG TCTGCAGTTCGTCCATAATTGTACGAGGTGCATGCGTGGACCCATCGACG GAACGGTGTCCAAAATGGCTCAACTCCTGTTGTATGCTGCTGCCCTAAGG GTTTCGTTCTCGTCAAGTGCGGACTTCCGCGGCCATTCTGCGACCTCAAC ACACAACACACCCTGTTCGTTTTACCTGATTTATTTTCATCTTTCGTGTT TGTGGCCGGTATCCACCCACCAGGCGACGACACGGTCAGTTTTTGTTCCG ATGAGTTGATTCATTGACGGATGCTCCGTGTCCCTCCCCTTGATCCTGCG TGTTGTTAAACATCCTGGCAACGACGGCGTCGACGACGACGGCAACGACG ACGGCAACGACAACGGCGACGAAAAAGGCGTGTGGGCCTTCCGACACCGC AGCCGACGTCATCTGCGAGAGACTCTCCAGGCACATGTCGAGGAACCAGC TTATCCGGCTAAACTGGTGGCAGAGACTCACGGCTGGTGTGCACCCCAAC ATCCTGTCCTACTGTCCCCAGGTGCCCGAAGCAAACAGTCCGTCCATACC CCGCTCTTGTGATGCCAAGTTTTAGCGCCAGGAGTACCACTGCTGCGCTG TTCTACACCAGTGCTGGCGCTGTTGCCGGTGGTCGGGACTCAACACCTCG CTCGTTATTGAAGGATGGCGTGTTTTTGTTTTTGCCACGACAATGCGCCA AGAAAGACCACTCGTGTTCATACATACTTCGATGTTTCCGCGGCTTGTGC GCCCTTCATCCAAGAGACCGCCACACGGCGACGATCGGCGGGCGTCAATA CATGGCAACACGTTTGAAAGGGAATCAGGTGCCGCGGAAACATGAGCGTA GAACACGCGTTGGCAAACAGCTCGTCTTTTTTGCGTGCATCTCACGACAC TAGACCTTTCGGTCTTTCACAACAATCCTCGCAGGCTGAACAGGAGAGAT GTCATCTATCAAGGCTTTGTTCCCAGACGAACCAAGCCGTGCGCGCAGAC TGCTTCCGCGTGCGCCGGCGTTGGGGAAATTGAGGTTCGGCGAGAGCCCT CCGCCAAACTGTTGTGGCAGCCAACCTTTCGCATTTGCATTTTTGTAGCG CGTGTTTGTGTTCGATGTTTTCTGTCACGAAACAAATTTCCTTCTAGAAT CGCCTCGGCTAGCTCTCTCGCCTGTTTTTTCCGCTCAATCGTTGCTCGCT CGCTGTGCGTGCATGTCCTTGTCGGTTTCGATCTCGCTGACGCTGACGAT GCCCATGTCCCGGTGTGGGCGATGCGCGTGCAGGACAACAACCACGGGAT GTTCGTGCCGCCCTCCACCATCACGCACCAAGTCGTCGTCTGCACTTGCG GGACGGCAGGGATGCTGAGCATGCTCGGGGTGGACGACGTGAGGACGGAA TGTTGGTCTGCTGTTGCTGTTGTTGTTGCTGTGGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTCGTTGTTGTTGTTTTATCCTGCT CCTGACTTCATGAAGCAAACCGAATTGACCGCAAGGGGAAACCTCCGTTA TTCCGCACGAGACGAATTCCGCGATCATTGGCTTGTCGGAAAAAGGCAAG ACTTGACAGCAAAGTCCCAACCGTACACATCAACGAACCCTCAATGTTTG GAGCCCAACAGAAGCCTCGAGCTACGCCTCGCACGACGTACGTCAGGAGG TGTTCCAACGGTGTCGTTATGTTTTCAATAAAAAAACGATGTGAGCCACA AAACCCCTCCAATAATGACCCTTGAGTAGCTGGTCCAGGCGGTGCCCCAT TGACGTAAGCGCGGCACCTGCCGGTGACAGTCCATGTATTTCAGTAGATC GTTGACTCACGTCTTGGCGCTCAGCACCCCACCCACAAACAAGAGGCGCG TGGCTGCAAATTCCAGCTGGGGGCTGGGAGGGCGGCTCTCGCGCAATATT TTCGTGCCAGTCCCACGAACGTGGCCATTCACTGCAACAGTCCGGGCGCG GATGACCAGGAGTGTTTCGCGATCGCGACGAAGCAAGGCAGAAGGCGTGA CAGGCCAGCCGACCGTGGGAGAAAACGGGGCCTGCCACGTGCGCACGCCT CCGTCCTTGCCGCAAAAAAAATCGACGCATCTCGCACCACAGCAGCAAGC TGCACCCTACCGGGGACTGCGCAAATCCCACCGAAGAACAGAACCCCGGA AAATAGGCCGGACGACGTAACAACATTCACACATTCGTTTCCCCCCGTGT TTTTTGGTCTGGCCAGACGTACTTCACGCACATTTTCGTGGACGAGTCGT CCAACGCCATGGAGACCGAGCTGCTAGTGCCCCTGTCGTACGCTGGCAGT AGCGCGCAGATAATCCTGTGCGGGGACCCTCGACAGGTGGGTGGGTGAGG GGGGAACGTGGTGGTTTGTGCTGTCTCTGCTTGAAGGCATGCGTCGTCGT TCGTTCCATGGAGAGATTGGGGAGACCAGACCCGTGTGTATCAGGGCCTT GGTTGGTGGGCGATGTGGTCACGGAATGTCATTGTCGAGCATTTTCAGAC CTCTGTGGCGCGGATCGCCGAAGGGGAACGTAGCCGGCACTGCCTCCCTT CCTGGCGGGTGGTGATTGGTCTTGCCTCGAGTAAAGTGAAGTCTACCTTA AGGAAAGTAGCAGTGCGGAGGCGTCACGAAATCACGAAAAGTAACGATGT ACTTCGAAGTACGGTTTGCAGCGGGCGACGGTGCGGATCGAGAGGTACAC CTGTACCAGTCGGGCACCACCGCTGCCCGCGTGGTTTCCGCCGGCCAAGG GTGGTGCTGTCCCGCTTTGTTGTGGTGATGGTTGTTGTAGTTCGTGTCGT GTTTGTCGTCGTTTGAAGGGTCGTCGGTTCCACCTCTACGCTCCAAGACA AGTTGGTCCTGAAAAGGACTTGTCAAGCTGGATGTCCCGGTGCTTTGCCC CGGATGACCCGGTGCTTTGCCCTGCCCTCCCTTGTCGGCATTCCTATTTT TTTGTGCCTCCTTCCTCTCCATCTTCATTGCTGCCTTTTCGTCTCGTCCC ATTTTTCATGGTTGACCGTAACATCTTTTGATTCATCCTACATCGTCTCT GCTCGCCCGGCTTGATTCGTGGAAACAAACAAAACATCCCGTCCATCTCG TCCGTGCGTGCACCATTTTCCGCAGCTCGGCGCCGCGGTTCGAAGTCCTT CGGCTCGAGCTCTGGGCCTGGAGGTGTCCCTGCAGGTGGGAGTTCGCTCC CTGATGATACATGAATGAATCAAGTTGTTCTCTTTCGGATAGGTGACGAA TCAAGGATGTGGCGATCCGACTGAATGATGCCGTGGCGGTGTGTGGTGTG CCTTTTCCTGGTGCCGTGATACGTCGTGCTGTCGACTGCCTAGCGAAGGC ATGCTGGCACGGGCGAAAGCGAAACGCGATTCCCACGCTTGGTCTCTCAT CTTGCAGTTTGCGGTCCAGCACCAGAGCGGTTTTCGAAAAGCGGTCTCCT GCCCTGCCTTAGGGATCCGTTCAATTCCACGGTGCCCCCTTGGCCGGCGA TGTCTGTGCTGGGAGAGCCGCGCGCGTTCGATGACTTCATACGGCCGCCC GCCTCTCGCTCTCTCTCTCTCTTCCCCGTACTCAGGAGCGACTGATGGGC CAAGAGATGTACTCCAAGCACGCCGAAACGCCAAGGGCGCTGTCGACCTC TACAGCACGTGGCGCGAGTGGCGTAAGGTAGACGCTTTCTTTAAGAAAGG ATGGTTGGAACAACATTTCGATCATCTTTTGTTTTGTTTGAGTCGAAGGC GTTGCCGAGGGCTCAGCGAACAAAGCAACGCGCCGGCGCCAGGTATGCGT TGTCTTTGCGAAAATGCTTTCCAGCGCCGCTAGGGGGGAATCCCACAGCA GAATTACGGGAAGAGGGACGAAAAGGTTGGAGATACCTAAACGCGTGTAA AAGTTGTACACCCATCGTTGCTCGTATTGAAAAACCCGATCCCTCGTGCG CGAAGTTATAGAGCCCCCCCCTCCCCTCCAACAACGGCAGAATGAACTCC GATCTTCCTCACATATCTCATTCGTGTGCCCCGGCATGTAGTTGACCCGG CTTCCACCGAAGAAACGTGAAAAAATAATGATTTTATCGGCGCCCGTACC CTACAAGTAGCACCTCCTCCACGGCTCCTACCTCTTGACGACCCCTCTTG TTGCGTTCTCCAGGGGTCGCCAAGAAGTATCGAGCCCGTGGGGCTCGCTC GCCCCCCTTGGTCGAAATTCTTGAAATAAAATGCACACGCGAACCGTCGC TCTCGGGCAGGTGCATGACGCAGCTCCTCAACAACTATCGAGCACACGAG GTTCTGCTGACCCTCCCGAGCGCGATGTTCTACGGCGGGACCCTCGTGAG GAGCGCCGAGCGGTCGCAGACCGACAGCATGCTGCAGTGGGAGGAGCTTC CCAAGACCAAGCCTTTCCCGTTGGTTTTCTACGGGATCCAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1466:20631..25621+

>mRNA_H-canaliculatus_F_contig1466.3575.1 ID=mRNA_H-canaliculatus_F_contig1466.3575.1|Name=mRNA_H-canaliculatus_F_contig1466.3575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1608bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1466:20631..25621+ (Hapterophycus canaliculatus Oshoro5f female)
GTGCCGTACATCATTTTCGGCCCGCCTGGTACCGGTAAAACCTGCACCGT
CATAGAGACCATCCTCCAACTCGTCAAGCTCAAGCCCGAGAGCCGAATAC
TGGTGCCGTACATCATTTTCGGCCCGCCTGGTACCGGTAAAACCTGCACC
GTCATAGAGACCATCCTCCAACTCGTCAAGCTCAAGCCCGAGAGCCGAAT
ACTGGCGTGTGGGCCTTCCGACACCGCAGCCGACGTCATCTGCGAGAGAC
TCTCCAGGCACATGTCGAGGAACCAGCTTATCCGGCTAAACTGGTGGCAG
AGACTCACGGCTGGTGTGCACCCCAACATCCTGTCCTACTGTCCCCAGGC
GTGTGGGCCTTCCGACACCGCAGCCGACGTCATCTGCGAGAGACTCTCCA
GGCACATGTCGAGGAACCAGCTTATCCGGCTAAACTGGTGGCAGAGACTC
ACGGCTGGTGTGCACCCCAACATCCTGTCCTACTGTCCCCAGGACAACAA
CCACGGGATGTTCGTGCCGCCCTCCACCATCACGCACCAAGTCGTCGTCT
GCACTTGCGGGACGGCAGGGATGCTGAGCATGCTCGGGGTGGACGACGAC
AACAACCACGGGATGTTCGTGCCGCCCTCCACCATCACGCACCAAGTCGT
CGTCTGCACTTGCGGGACGGCAGGGATGCTGAGCATGCTCGGGGTGGACG
ACACGTACTTCACGCACATTTTCGTGGACGAGTCGTCCAACGCCATGGAG
ACCGAGCTGCTAGTGCCCCTGTCGTACGCTGGCAGTAGCGCGCAGATAAT
CCTGTGCGGGGACCCTCGACAGACGTACTTCACGCACATTTTCGTGGACG
AGTCGTCCAACGCCATGGAGACCGAGCTGCTAGTGCCCCTGTCGTACGCT
GGCAGTAGCGCGCAGATAATCCTGTGCGGGGACCCTCGACAGCTCGGCGC
CGCGGTTCGAAGTCCTTCGGCTCGAGCTCTGGGCCTGGAGGTGTCCCTGC
AGCTCGGCGCCGCGGTTCGAAGTCCTTCGGCTCGAGCTCTGGGCCTGGAG
GTGTCCCTGCAGGAGCGACTGATGGGCCAAGAGATGTACTCCAAGCACGC
CGAAACGCCAAGGGCGCTGTCGACCTCTACAGCACGTGGCGCGAGTGGCG
TAAGGAGCGACTGATGGGCCAAGAGATGTACTCCAAGCACGCCGAAACGC
CAAGGGCGCTGTCGACCTCTACAGCACGTGGCGCGAGTGGCGTAAGGTGC
ATGACGCAGCTCCTCAACAACTATCGAGCACACGAGGTTCTGCTGACCCT
CCCGAGCGCGATGTTCTACGGCGGGACCCTCGTGAGGAGCGCCGAGCGGT
CGCAGACCGACAGCATGCTGCAGTGGGAGGAGCTTCCCAAGACCAAGCCT
TTCCCGTTGGTTTTCTACGGGATCCAGGTGCATGACGCAGCTCCTCAACA
ACTATCGAGCACACGAGGTTCTGCTGACCCTCCCGAGCGCGATGTTCTAC
GGCGGGACCCTCGTGAGGAGCGCCGAGCGGTCGCAGACCGACAGCATGCT
GCAGTGGGAGGAGCTTCCCAAGACCAAGCCTTTCCCGTTGGTTTTCTACG
GGATCCAG
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