mRNA_H-canaliculatus_F_contig145.3492.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: A0A6H5KDB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB3_9PHAE) HSP 1 Score: 374 bits (961), Expect = 8.850e-123 Identity = 220/377 (58.36%), Postives = 252/377 (66.84%), Query Frame = 1
Query: 193 ERCAFTALPTVVIGRVGSLLAESSLSVACRSTLEALPEVHYKINMSEDVKHFEGDPDPLGVAAR-----DHFGLHASGRLATGRVVVRITITHVALQAYFAQQQAVKRVVRHSITTLQEITI--------------SSCT----------------GPGNVPLAHILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLKD 1218
ER LP VV+ + S +SSLS CR+TL + E+HYK++M++ + ++ DH G+ ASG LATGR VVRITITHV A +QA++RVV+HSI TL+EITI SC+ GP + P A ILGELVP SAKR RVAPRLA+VHLV GATGVAKAG+AVA GLWPALEVLTFSHCRANAGHF+DLA GL + LAPRLRVL W DQSSIR +DDV+L ALS G CPL+EHLSFTGN FCPE RI L L CP LR LRMDCSRTPH ELR LA AL GH P LE L VRAT YYR SDV+L+AL+R AASR PPVELE +IKTRLK
Sbjct: 75 ERHYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGGIRELHYKVDMAKVASAYFFGRLAAAYCSKTLELTDHMGIDASGALATGRAVVRITITHVHETQDPALEQAIRRVVQHSIPTLREITIRGYPTWTGRARPSGGSCSIQYPPCARSPSAGAPHGP-DAPGA-ILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVATGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSIRDVAVDDVILNALSWGQCPLVEHLSFTGNRFCPEHRITYLEEMLWVCPRLRELRMDCSRTPHHELRVLAGALAGGHVPRLERLLVRATAPYYRDSDVELRALKRVAASRSPPVELELQIKTRLKQ 449
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: D8LAY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAY2_ECTSI) HSP 1 Score: 357 bits (916), Expect = 4.520e-118 Identity = 199/294 (67.69%), Postives = 217/294 (73.81%), Query Frame = 1
Query: 361 DPLGVAARDHFGLHASGRLATGRVVVRITITHVALQA--------YFAQQQAVKRVVRHSITTLQEITISSC-TGPGNVPLAHILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLK 1215
DP G +H GL ASG LATGR +VRITIT V A Y A +QAV RVVRHSI TL+EITI C T G + ILGELVP SAKR RVAPRL++VHLV GATGVAKAG+AVAAGLWPALEVLTFSHCRANAGHF+DLA GL + LAPRLRVL W DQSS+R +DDV+L ALS G CPL+E LSFTGN FCPE I L AL CP LR LRMDCSRTPH +LR L AL GH P LE L VRAT YYR SDV+L AL+RAAASR PPVELE +IKTRLK
Sbjct: 12 DPAGADLANHMGLEASGALATGRAIVRITITTVFESANESRHHARYKALEQAVGRVVRHSIPTLREITIRGCPTWNGRARVGAILGELVPLSAKRHRVAPRLSRVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDASVDDVILGALSWGKCPLVERLSFTGNRFCPEHSIGYLEEALWVCPRLRELRMDCSRTPHHQLRVLVGALVGGHVPRLERLLVRATAPYYRDSDVELLALKRAAASRSPPVELELQIKTRLK 305
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: D7FWR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR8_ECTSI) HSP 1 Score: 356 bits (913), Expect = 1.160e-117 Identity = 197/301 (65.45%), Postives = 220/301 (73.09%), Query Frame = 1
Query: 319 INMSEDVKHFEGDPDPLGVAARDHFGLHASGRLATGRVVVRITITHVALQAYFAQQQAVKRVVRHSITTLQEITISSC-TGPGNVPLAHILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLKD 1218
I+ E + + DP G +H GL ASG LATGR VVRITIT+V A +QA++RVV+HSI TL+EI I T G + ILGELVP SAKR RVAPRLA+VHLV GATGVAKAG+AVAAGLWPALEVLTFSHCRANAGHF+DLA GL + LAPRLRVL W DQSS+R +DDV+L ALS G CPL+E LSFTGN FCPE RI L L CP LR LRMDCSRTPH +L LA AL GH P LE L VRAT RYYR SDV+L AL+RAAASR PPVELE +IKT LK
Sbjct: 2 IDCREVLLDYSPSEDPTGAELTNHMGLDASGALATGRAVVRITITYVHHFQDPALEQAIRRVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVELLALKRAAASRSPPVELELQIKTLLKQ 302
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: D7FWR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR9_ECTSI) HSP 1 Score: 350 bits (899), Expect = 1.870e-112 Identity = 220/429 (51.28%), Postives = 250/429 (58.28%), Query Frame = 1
Query: 187 AHERCAFTALPTVVIGRVGSLLAESSLSVACRSTLEALPEVHYKINMSE-DVKHFEGDPDPLGVAARDHFGLHASGRLATGRVVVRITITHVALQAYFAQQQAVKRVVRHSITTLQEI-----------------------------------------------------------------TISSCTG-------------PGNVP------LAHILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLKD 1218
A ER LP VV+ + S +SSLS CR+TL A+ E+HYKI+M++ H+ + +H GL ASG LATGR VVRITITHV A +QA++RVV+HSI TL+EI T S C G P + ILGELVP SAKR RVAPRLA+VHLV GATGVAKAG+AVAAGLWPALEVLTFSHCRANAGHF+DLA GL + LAPRLRVL W DQSS+R +DDV+L ALS G CPL+E LSFTGN FCPE RI L L CP LR LRMDCSRTPH +L LA AL GH P LE L VRAT RYYR SDV+L AL+RAAASR PPVELE +IKTRLK
Sbjct: 100 AGERRYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKIDMNKVSSAHYLKRSE-----LTNHMGLDASGALATGRAVVRITITHVLHAQDPALEQAIRRVVQHSIPTLREIAIRRYPTWNGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVELLALKRAAASRSPPVELELQIKTRLKQ 523
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: A0A6H5KU71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU71_9PHAE) HSP 1 Score: 270 bits (690), Expect = 3.920e-85 Identity = 148/212 (69.81%), Postives = 159/212 (75.00%), Query Frame = 1
Query: 583 ILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLKD 1218
I GELVP SAKR RVA RLA+VHLV GATG AKAGKAVAAGL PALEV TFSHCRANAGHF+DLA GL + LAPRLRVL W DQS+IR +DDV+L ALS G CPL+E LSFTG FCPE I L CP LR LRMDCSRTPH +LR LA AL H P LE L VRAT YYR SDV+L AL+ AAASR PPV LE +IKTRLK
Sbjct: 17 IRGELVPLSAKRHRVARRLARVHLVDGATGAAKAGKAVAAGLRPALEVPTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSTIRDAALDDVILGALSWGHCPLVERLSFTGTRFCPEHSIRYLEEMFWVCPRLRELRMDCSRTPHHQLRVLAGALAGEHVPRLERLLVRATAPYYRDSDVELLALKLAAASRSPPVALELQIKTRLKQ 228
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: A0A6H5KEB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB8_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 5.670e-15 Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 187 AHERCAFTALPTVVIGRVGSLLAESSLSVACRSTLEALPEVHYKINMSEDVKHFEGDPDPLGVAARDHFGLHASGRLATGRVVVRITITHV 459
A ER LP VV+ + S +SSLS CR+TL A+ E+HYK+NM+EDV +G + H GL ASG LATGR VVRITITHV
Sbjct: 62 AAERHYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKVNMTEDV---------VGAEIKHHMGLDASGALATGRDVVRITITHV 143 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig145.3492.1 >prot_H-canaliculatus_F_contig145.3492.1 ID=prot_H-canaliculatus_F_contig145.3492.1|Name=mRNA_H-canaliculatus_F_contig145.3492.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=401bp MNLATTSLPGSKRSIDTLTLPNKTKKVATAGLPVAAFARATPPSAPASSPback to top mRNA from alignment at H-canaliculatus_F_contig145:56487..58599+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig145.3492.1 ID=mRNA_H-canaliculatus_F_contig145.3492.1|Name=mRNA_H-canaliculatus_F_contig145.3492.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2113bp|location=Sequence derived from alignment at H-canaliculatus_F_contig145:56487..58599+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig145:56487..58599+ >mRNA_H-canaliculatus_F_contig145.3492.1 ID=mRNA_H-canaliculatus_F_contig145.3492.1|Name=mRNA_H-canaliculatus_F_contig145.3492.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2406bp|location=Sequence derived from alignment at H-canaliculatus_F_contig145:56487..58599+ (Hapterophycus canaliculatus Oshoro5f female)back to top |