prot_H-canaliculatus_F_contig145.3492.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig145.3492.1
Unique Nameprot_H-canaliculatus_F_contig145.3492.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length401
Homology
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: A0A6H5KDB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB3_9PHAE)

HSP 1 Score: 374 bits (959), Expect = 1.500e-123
Identity = 220/376 (58.51%), Postives = 252/376 (67.02%), Query Frame = 0
Query:   59 ERCAFTALPTVVIGRVGSLLAESSLSVACRSTLEALPEVHYKINMSEDVKHFEGDPDPLGVAAR-----DHFGLHASGRLATGRVVVRITITHVALQAYFAQQQAVKRVVRHSITTLQEITI--------------SSCT----------------GPGNVPLAHILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLK 399
            ER     LP VV+  + S   +SSLS  CR+TL  + E+HYK++M++    +          ++     DH G+ ASG LATGR VVRITITHV      A +QA++RVV+HSI TL+EITI               SC+                GP + P A ILGELVP SAKR RVAPRLA+VHLV GATGVAKAG+AVA GLWPALEVLTFSHCRANAGHF+DLA GL + LAPRLRVL W DQSSIR   +DDV+L ALS G CPL+EHLSFTGN FCPE RI  L   L  CP LR LRMDCSRTPH ELR LA AL  GH P LE L VRAT  YYR SDV+L+AL+R AASR PPVELE +IKTRLK
Sbjct:   75 ERHYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGGIRELHYKVDMAKVASAYFFGRLAAAYCSKTLELTDHMGIDASGALATGRAVVRITITHVHETQDPALEQAIRRVVQHSIPTLREITIRGYPTWTGRARPSGGSCSIQYPPCARSPSAGAPHGP-DAPGA-ILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVATGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSIRDVAVDDVILNALSWGQCPLVEHLSFTGNRFCPEHRITYLEEMLWVCPRLRELRMDCSRTPHHELRVLAGALAGGHVPRLERLLVRATAPYYRDSDVELRALKRVAASRSPPVELELQIKTRLK 448          
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: D8LAY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAY2_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 5.620e-119
Identity = 199/294 (67.69%), Postives = 217/294 (73.81%), Query Frame = 0
Query:  115 DPLGVAARDHFGLHASGRLATGRVVVRITITHVALQA--------YFAQQQAVKRVVRHSITTLQEITISSC-TGPGNVPLAHILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLK 399
            DP G    +H GL ASG LATGR +VRITIT V   A        Y A +QAV RVVRHSI TL+EITI  C T  G   +  ILGELVP SAKR RVAPRL++VHLV GATGVAKAG+AVAAGLWPALEVLTFSHCRANAGHF+DLA GL + LAPRLRVL W DQSS+R   +DDV+L ALS G CPL+E LSFTGN FCPE  I  L  AL  CP LR LRMDCSRTPH +LR L  AL  GH P LE L VRAT  YYR SDV+L AL+RAAASR PPVELE +IKTRLK
Sbjct:   12 DPAGADLANHMGLEASGALATGRAIVRITITTVFESANESRHHARYKALEQAVGRVVRHSIPTLREITIRGCPTWNGRARVGAILGELVPLSAKRHRVAPRLSRVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDASVDDVILGALSWGKCPLVERLSFTGNRFCPEHSIGYLEEALWVCPRLRELRMDCSRTPHHQLRVLVGALVGGHVPRLERLLVRATAPYYRDSDVELLALKRAAASRSPPVELELQIKTRLK 305          
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: D7FWR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR8_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 2.050e-118
Identity = 197/300 (65.67%), Postives = 220/300 (73.33%), Query Frame = 0
Query:  101 INMSEDVKHFEGDPDPLGVAARDHFGLHASGRLATGRVVVRITITHVALQAYFAQQQAVKRVVRHSITTLQEITISSC-TGPGNVPLAHILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLK 399
            I+  E +  +    DP G    +H GL ASG LATGR VVRITIT+V      A +QA++RVV+HSI TL+EI I    T  G   +  ILGELVP SAKR RVAPRLA+VHLV GATGVAKAG+AVAAGLWPALEVLTFSHCRANAGHF+DLA GL + LAPRLRVL W DQSS+R   +DDV+L ALS G CPL+E LSFTGN FCPE RI  L   L  CP LR LRMDCSRTPH +L  LA AL  GH P LE L VRAT RYYR SDV+L AL+RAAASR PPVELE +IKT LK
Sbjct:    2 IDCREVLLDYSPSEDPTGAELTNHMGLDASGALATGRAVVRITITYVHHFQDPALEQAIRRVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVELLALKRAAASRSPPVELELQIKTLLK 301          
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: D7FWR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR9_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 3.320e-113
Identity = 220/428 (51.40%), Postives = 250/428 (58.41%), Query Frame = 0
Query:   57 AHERCAFTALPTVVIGRVGSLLAESSLSVACRSTLEALPEVHYKINMSE-DVKHFEGDPDPLGVAARDHFGLHASGRLATGRVVVRITITHVALQAYFAQQQAVKRVVRHSITTLQEI-----------------------------------------------------------------TISSCTG-------------PGNVP------LAHILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLK 399
            A ER     LP VV+  + S   +SSLS  CR+TL A+ E+HYKI+M++    H+    +       +H GL ASG LATGR VVRITITHV      A +QA++RVV+HSI TL+EI                                                                 T S C                G  P      +  ILGELVP SAKR RVAPRLA+VHLV GATGVAKAG+AVAAGLWPALEVLTFSHCRANAGHF+DLA GL + LAPRLRVL W DQSS+R   +DDV+L ALS G CPL+E LSFTGN FCPE RI  L   L  CP LR LRMDCSRTPH +L  LA AL  GH P LE L VRAT RYYR SDV+L AL+RAAASR PPVELE +IKTRLK
Sbjct:  100 AGERRYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKIDMNKVSSAHYLKRSE-----LTNHMGLDASGALATGRAVVRITITHVLHAQDPALEQAIRRVVQHSIPTLREIAIRRYPTWNGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVELLALKRAAASRSPPVELELQIKTRLK 522          
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: A0A6H5KU71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU71_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 8.760e-86
Identity = 148/211 (70.14%), Postives = 159/211 (75.36%), Query Frame = 0
Query:  189 ILGELVPRSAKRRRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFKDLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLSFTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAGHAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLK 399
            I GELVP SAKR RVA RLA+VHLV GATG AKAGKAVAAGL PALEV TFSHCRANAGHF+DLA GL + LAPRLRVL W DQS+IR   +DDV+L ALS G CPL+E LSFTG  FCPE  I  L      CP LR LRMDCSRTPH +LR LA AL   H P LE L VRAT  YYR SDV+L AL+ AAASR PPV LE +IKTRLK
Sbjct:   17 IRGELVPLSAKRHRVARRLARVHLVDGATGAAKAGKAVAAGLRPALEVPTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSTIRDAALDDVILGALSWGHCPLVERLSFTGTRFCPEHSIRYLEEMFWVCPRLRELRMDCSRTPHHQLRVLAGALAGEHVPRLERLLVRATAPYYRDSDVELLALKLAAASRSPPVALELQIKTRLK 227          
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Match: A0A6H5KEB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB8_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.860e-15
Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 0
Query:   57 AHERCAFTALPTVVIGRVGSLLAESSLSVACRSTLEALPEVHYKINMSEDVKHFEGDPDPLGVAARDHFGLHASGRLATGRVVVRITITHV 147
            A ER     LP VV+  + S   +SSLS  CR+TL A+ E+HYK+NM+EDV         +G   + H GL ASG LATGR VVRITITHV
Sbjct:   62 AAERHYLDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKVNMTEDV---------VGAEIKHHMGLDASGALATGRDVVRITITHV 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig145.3492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KDB3_9PHAE1.500e-12358.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAY2_ECTSI5.620e-11967.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWR8_ECTSI2.050e-11865.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWR9_ECTSI3.320e-11351.40Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KU71_9PHAE8.760e-8670.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB8_9PHAE3.860e-1551.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 157..379
e-value: 1.3E-10
score: 42.0
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 169..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig145contigH-canaliculatus_F_contig145:56505..58402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig145.3492.1mRNA_H-canaliculatus_F_contig145.3492.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig145 56487..58599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig145.3492.1 ID=prot_H-canaliculatus_F_contig145.3492.1|Name=mRNA_H-canaliculatus_F_contig145.3492.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=401bp
MNLATTSLPGSKRSIDTLTLPNKTKKVATAGLPVAAFARATPPSAPASSP
AAERPVAHERCAFTALPTVVIGRVGSLLAESSLSVACRSTLEALPEVHYK
INMSEDVKHFEGDPDPLGVAARDHFGLHASGRLATGRVVVRITITHVALQ
AYFAQQQAVKRVVRHSITTLQEITISSCTGPGNVPLAHILGELVPRSAKR
RRVAPRLAKVHLVAGATGVAKAGKAVAAGLWPALEVLTFSHCRANAGHFK
DLASGLSARLAPRLRVLYWGDQSSIRKNPIDDVVLTALSRGGCPLIEHLS
FTGNHFCPEKRIECLLGALRACPLLRTLRMDCSRTPHLELRDLARALEAG
HAPNLELLFVRATTRYYRGSDVQLKALRRAAASRKPPVELESEIKTRLKD
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf