mRNA_H-canaliculatus_F_contig1448.3471.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: D7FS22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS22_ECTSI) HSP 1 Score: 152 bits (384), Expect = 4.200e-41 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 1
Query: 1 QVWIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVR 246
QVW+VYHSKMKTKQVYLHDSTYATPFSL+LWGARVRHERP KKEAVEVVIDRWLRFRMTE+TAVAFKAMRRELSNLLVR
Sbjct: 1289 QVWVVYHSKMKTKQVYLHDSTYATPFSLMLWGARVRHERPLGHKKKEAVEVVIDRWLRFRMTENTAVAFKAMRRELSNLLVR 1370
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: A0A835Z4K1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K1_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.310e-17 Identity = 40/84 (47.62%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 7 WIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPH-----KKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLV 243
+++YHS++KT+QVYLH++T T FSLLLWG+ +RH R + KK A+ V +D WLRF+ TES V FK +R++++ LL+
Sbjct: 900 YVLYHSRVKTRQVYLHETTCCTAFSLLLWGSHIRHLRHTEDTGGPTLKKRALIVAVDEWLRFKTTESIGVVFKHLRKDINELLL 983
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: W7TVU1_9STRA (Atp-dependent rna helicase dhx57 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVU1_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.290e-9 Identity = 29/80 (36.25%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 7 WIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHK-KEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLV 243
+++YH K+++ ++Y +DST+ +PF++LL+G ++ + + +++ V +D WL FRMT S+AV K +R EL+ LL+
Sbjct: 1125 FLLYHKKVQSTKIYAYDSTFVSPFTILLFGGDIKIQWEHGSLEGDQSIAVTMDNWLSFRMTASSAVLVKYIRHELNQLLL 1204
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: A0A7S3XX33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX33_HETAK) HSP 1 Score: 62.0 bits (149), Expect = 2.150e-9 Identity = 31/81 (38.27%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 7 WIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVR--HERPRKPHKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLV 243
W++YHSK+++ +VYLHDST+ + FSLLL+G V ++ ++ A+ + +D W+ F+M + AV K R E+ LL+
Sbjct: 248 WVLYHSKVQSSRVYLHDSTFISAFSLLLFGGDVTASQDKGTTGSRRNAL-LSVDEWVSFKMPKEAAVLCKVFRLEIDRLLL 327
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: A0A7S2ID12_9EUKA (Hypothetical protein n=2 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2ID12_9EUKA) HSP 1 Score: 60.8 bits (146), Expect = 4.910e-9 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 7 WIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLL 240
W+VYH K+ T ++Y+HD T T L L+GA P+ H + V++D W+ R++ TAV FKA+RR+L L+
Sbjct: 156 WLVYHEKVATGKIYVHDVTAVTSLDLFLFGAE-----PQVLHAQH--RVIVDNWIEMRISPRTAVLFKALRRQLFVLM 226
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: W7T633_9STRA (Putative atp-dependent rna helicase dhx36 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T633_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.150e-8 Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 13 VYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLL 240
VYH KM+T + YLHD ++ +P S+LL+G+ +R R + V + +D WL F+ E T+V ++ L L
Sbjct: 1159 VYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACL 1234
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: A0A0M0JFJ6_9EUKA (ATP-dependent RNA helicase dhx29-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFJ6_9EUKA) HSP 1 Score: 58.9 bits (141), Expect = 2.910e-8 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 7 WIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLL 240
W+VYH K+ T +V++HD T T L L+GA P+ H + +V+ID W+ R++ TAV FKA+R++L L+
Sbjct: 737 WLVYHEKVATGKVFVHDVTAVTSLDLFLFGAE-----PQVLHAQH--KVIIDGWIDLRISPRTAVLFKALRKQLFELM 807
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: A7SF08_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SF08_NEMVE) HSP 1 Score: 57.4 bits (137), Expect = 1.010e-7 Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 1
Query: 7 WIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVR 246
W++YH K+K+ +V++HDST PF LL +G + + H + + +D +++FR + A K +RREL LL R
Sbjct: 670 WLIYHQKIKSSKVFIHDSTVIAPFPLLFFGGSISMH-VEQGHGQGHETIAVDNFIKFRSPKRIANLVKDLRRELDTLLER 748
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: UPI001390545E (ATP-dependent DNA/RNA helicase DHX36 isoform X1 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=UPI001390545E) HSP 1 Score: 57.4 bits (137), Expect = 1.020e-7 Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 1
Query: 7 WIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLLVR 246
W++YH K+K+ +V++HDST PF LL +G + + H + + +D +++FR + A K +RREL LL R
Sbjct: 978 WLIYHQKIKSSKVFIHDSTVIAPFPLLFFGGSISMH-VEQGHGQGHETIAVDNFIKFRSPKRIANLVKDLRRELDTLLER 1056
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Match: T1IZC6_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IZC6_STRMM) HSP 1 Score: 55.8 bits (133), Expect = 3.550e-7 Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 1
Query: 7 WIVYHSKMKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHKKEAVEVVIDRWLRFRMTESTAVAFKAMRRELSNLL 240
WIVYH +MK+ VY+HDS+ +P+ LLL+G ++R + + V ID W++F E A +R EL LL
Sbjct: 829 WIVYHQRMKSTCVYIHDSSMVSPYPLLLFGGKLRCGAIDRKYG-----VTIDGWIKFWCPEERADLIMRLRNELDKLL 901 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1448.3471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1448.3471.1 >prot_H-canaliculatus_F_contig1448.3471.1 ID=prot_H-canaliculatus_F_contig1448.3471.1|Name=mRNA_H-canaliculatus_F_contig1448.3471.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=73bp MKTKQVYLHDSTYATPFSLLLWGARVRHERPRKPHKKEAVEVVIDRWLRFback to top mRNA from alignment at H-canaliculatus_F_contig1448:25823..26460- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1448.3471.1 ID=mRNA_H-canaliculatus_F_contig1448.3471.1|Name=mRNA_H-canaliculatus_F_contig1448.3471.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=638bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1448:25823..26460- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1448:25823..26460- >mRNA_H-canaliculatus_F_contig1448.3471.1 ID=mRNA_H-canaliculatus_F_contig1448.3471.1|Name=mRNA_H-canaliculatus_F_contig1448.3471.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=438bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1448:25823..26460- (Hapterophycus canaliculatus Oshoro5f female)back to top |