mRNA_H-canaliculatus_F_contig14218.3322.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: D8LHR8_ECTSI (CTLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR8_ECTSI) HSP 1 Score: 252 bits (643), Expect = 5.340e-72 Identity = 148/273 (54.21%), Postives = 172/273 (63.00%), Query Frame = 1
Query: 199 DCHAFAFDRLSRDEAPRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWDLAGGVMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNV 1017
D ++AFDRL DEA RF PT++VSGSHPVRSVGFSADG LFA G NDRTLRVC+TPSEA+LASNT +S+S +Q W S EV+RREN H GSI+CL FSPDSSLLATGSNDK VRLLKLP T +XX NG + + LRGHTGTVRD+C+P P+ P P +SAS+ +LLSVGAGD+ACRVWD+ GG + P+ RGHTDTVFSCSMLPGGNV
Sbjct: 690 DVDSYAFDRLVGDEASRFFPTILVSGSHPVRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTCGMDSDSPVQEWPSTEVIRRENHHLGSIFCLGFSPDSSLLATGSNDKLVRLLKLP------GTTPESQQQXXQQPGFSDRNGCD----------------------AEPSSLVLRGHTGTVRDLCYPLPPPTFAGP----PAASASSERLLSVGAGDYACRVWDVTGGXXX-----XXXXXXIAPLVLLRGHTDTVFSCSMLPGGNV 925
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A4Z2DH44_SCHJA (WD repeat-containing protein n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2DH44_SCHJA) HSP 1 Score: 100 bits (250), Expect = 1.300e-19 Identity = 91/275 (33.09%), Postives = 124/275 (45.09%), Query Frame = 1
Query: 238 EAPRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFP-SLFPSALTPASPAPGSSASAGQLLSVGAGDFA--------CRVWDLAGGVMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
++P ++P V+ S P+R + F GRL+A GSN + LRVC+ P+ L+ N T S ++RR+ HRGSIYC+A+SPD L+ATGSND +RLL++ T G AA G+ + G I LR H GTVRDI F +PS+ T S APGS LLS GAGD + +D + P S V + GHT V+S S+ G++ SA
Sbjct: 758 QSPCYIPVTVLEDSQPIRCIAFHPSGRLYAVGSNSKFLRVCQYPNVQRLSPNHVAT---------SPVVLMRRQKYHRGSIYCVAWSPDGRLIATGSNDTTIRLLQMDP--TTGIPDAACGDPEIAS--------------------------------TAGYAIELRYHDGTVRDIAFLLGSYPSSDTNTS-APGS-----HLLSAGAGDSRIYLVDCNRAQTYDPTSSKST----PPSY-----VVRSMSGHTAAVYSLSVWSPGSLFVSGSA 974
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A654I6C3_9CEST (Uncharacterized protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654I6C3_9CEST) HSP 1 Score: 98.6 bits (244), Expect = 2.660e-19 Identity = 87/281 (30.96%), Postives = 123/281 (43.77%), Query Frame = 1
Query: 244 PRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKL-PEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWD------LAGGVMSGGGGPGSLDGGMEP----------VATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
PR++P V+ S +RSV F G +A GSN +TLRVCR P+ NT M + E+ + V++R HRGSIYC+A+S D ++ATGSND +V LL++ PE + + A + I L H GTVRD+ F ++ + S A +AG LL+ GAGD V D LA +S GGG GG P V GH+ TV++ ++ G++ SA
Sbjct: 44 PRYLPVTVLEDSQAIRSVAFHPQGTFYAVGSNSKTLRVCRFPNI-----NTLMPDHEATAPL----VVMQRPKYHRGSIYCIAWSNDGRVIATGSNDTSVNLLRIDPETGCFSSVSDATSKKTENF-------------------------------------IQLTHHDGTVRDVAF---MLNSYSKGSEAVSGGGTAGYLLTAGAGDCRIYVVDVERASLLAQSSLSSGGGDTGNSGGTAPLRLKTSSAAVVRALSGHSATVYALTVWAPGSLFVSGSA 275
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A094ZT64_SCHHA (WD repeat-containing protein 47 n=9 Tax=Schistosoma TaxID=6181 RepID=A0A094ZT64_SCHHA) HSP 1 Score: 98.6 bits (244), Expect = 7.760e-19 Identity = 88/266 (33.08%), Postives = 120/266 (45.11%), Query Frame = 1
Query: 238 EAPRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWDLAGGVMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
+ PR++P ++ S P+R + F GRL+A GSN + LRVC+ PS L++N T S ++RR+ H+GSIYC+A+SPD ++ATGSND RLL++ T G AA G+ + G I LR H GTVRDI F L S P S S+ S+ LLS GAGD + D P S V + GHT V+S S+ G++ SA
Sbjct: 756 QTPRYIPVTILEDSQPIRCIAFHPSGRLYAVGSNSKFLRVCQYPSLQHLSANHVAT---------SPVVLMRRQKYHKGSIYCVAWSPDGRIIATGSNDTTTRLLQMDP--TTGIPDAACGDPEIAS--------------------------------TAGQAIELRYHDGTVRDIAF--LLGS--YPCSDTITSTPSS-HLLSAGAGDSRIYLVDCNRAQTFDLSTPKSTPPNYV-VRSMSGHTAAVYSLSVWSPGSLFVSGSA 972
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A7M3QFA5_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QFA5_SPIER) HSP 1 Score: 95.9 bits (237), Expect = 6.190e-18 Identity = 86/281 (30.60%), Postives = 122/281 (43.42%), Query Frame = 1
Query: 244 PRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKL-PEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWD------LAGGVMSGGGGPGSLDGGMEP----------VATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
PR++P V+ S +RSV F G +A GSN +TLRVCR P+ NT M + E+ + V++R HRGSIYC+A+S D ++ATGSND +V LL++ PE + + A + I L H GTVRD+ F ++ + S A +AG LL+ GAGD V D LA +S GGG G P V GH+ TV++ ++ G++ SA
Sbjct: 731 PRYLPVTVLEDSQAIRSVAFHPQGTFYAVGSNSKTLRVCRFPNI-----NTLMPDHEATAPL----VVMQRPKYHRGSIYCIAWSNDGRVIATGSNDTSVNLLRVDPETGCFSSVSDATSKKTEHF-------------------------------------IQLTHHDGTVRDVAF---MLNSYSKGSEAVSGGGTAGYLLTAGAGDCRIYVVDVERASLLAQSSLSSGGGDTGNSAGTAPLRLKTPSAAVVRALSGHSATVYALTVWAPGSLFVSGSA 962
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A504YZI5_FASGI (WD repeat-containing protein 47 n=3 Tax=Fasciola TaxID=6191 RepID=A0A504YZI5_FASGI) HSP 1 Score: 89.7 bits (221), Expect = 6.740e-16 Identity = 83/268 (30.97%), Postives = 121/268 (45.15%), Query Frame = 1
Query: 241 APRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVV-RRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWDLAGGVMSGGGGPGSLDG--GMEPVATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
+PR++P V+ S +R V F G+ +A GSN + LR+C+ P D+ G V ++ ++ RR HRGSIYC+A+SPD L+ATGSND VRLL P + G AA G+ + G I LR H GTVRD+ F L P + +S S+A + LL+ GAGD + D + V S GS+ + + GHT V++ ++ G++ SA
Sbjct: 598 SPRYIPVTVLEDSQAIRCVAFHPGGQYYAVGSNSKFLRICQFPDIHDIR----------GDHVATAPFILMRRGKYHRGSIYCVAWSPDGGLIATGSNDTTVRLL--PMESQSGLPIAAHGDPSLAS--------------------------------TAGHAIELRHHDGTVRDLTF--LLPGYPSDSSTRV-STAESRHLLTAGAGDARICLVDCSR-VESADPSLGSIRPVHSGHVIRSMSGHTGPVYALAVWAPGSLFVSGSA 817
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A8J4SSJ1_9TREM (WD repeat-containing protein 47 n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4SSJ1_9TREM) HSP 1 Score: 89.7 bits (221), Expect = 6.920e-16 Identity = 80/269 (29.74%), Postives = 120/269 (44.61%), Query Frame = 1
Query: 244 PRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKL-PEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFP-SLFPSALTPASPAP---GSSASAGQLLSVGAGDFACRVWDLAGGVMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
PR++P V+ S +R V F G+ +A GSN + LRVC+ P L ++ T + ++RR HRGSIYC+A+SPD L+ATGSND VRLL + PE G AA G+ + G + LR H GT+RD+ F S +P+ +S +P S+A++ LL+ GAGD + D + G + + GHT V++ ++ G++ SA
Sbjct: 677 PRYLPVTVLEDSQAIRCVAFHPTGQFYAVGSNSKFLRVCQFPDVRTLRADHVPT---------APYILMRRPKYHRGSIYCVAWSPDGRLIATGSNDTTVRLLAMCPET---GLPEAANGD--------------------------------ISLANTAGQCVDLRHHDGTIRDLTFLLSTYPTEQVGSSASPRISNSTAASTHLLTAGAGDARICLVDCSRAEAVNPALGGQPTKPSHVIRSMSGHTAPVYALNVWSPGSLFVSGSA 901
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A267GU53_9PLAT (Uncharacterized protein (Fragment) n=5 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GU53_9PLAT) HSP 1 Score: 89.7 bits (221), Expect = 7.060e-16 Identity = 54/107 (50.47%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 241 APRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEAD---LASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLL 552
A RFV V + VR+V F GR A GSN +TLRVCR+PS L N V + V R LH+GSIYCLA+SPDS LLATGSNDK VRLL
Sbjct: 780 ADRFVAIATVHDAMAVRAVAFDPSGRFLAIGSNSKTLRVCRSPSHRRPLLLQDND---------PVPEPQSVFTRPRLHKGSIYCLAWSPDSRLLATGSNDKTVRLL 877
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: UPI00143D9DA2 (WD repeat-containing protein 47 isoform X3 n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D9DA2) HSP 1 Score: 89.4 bits (220), Expect = 7.490e-16 Identity = 47/128 (36.72%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 172 YEGGAGYDPDCHAFAFDRLSRDEAPRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLK 555
+EG G DP + S PRFVP + VR F G+L+A GSN +TLR+C P +D+ + + + + +R H+GSIYCLA++PD L+ATGSNDK V+L++
Sbjct: 289 FEGNVGKDPRPELDVSNGSSNGGRPRFVPVTALEDVQAVRCAEFHPHGKLYAVGSNSKTLRICAYPKLSDVRED---------HETYQPTVLFKRTKHHKGSIYCLAWTPDGQLMATGSNDKTVKLMR 407
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A1I8HM82_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HM82_9PLAT) HSP 1 Score: 89.7 bits (221), Expect = 7.500e-16 Identity = 54/107 (50.47%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 241 APRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEAD---LASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLL 552
A RFV V + VR+V F GR A GSN +TLRVCR+PS L N V + V R LH+GSIYCLA+SPDS LLATGSNDK VRLL
Sbjct: 1093 ADRFVAIATVHDAMAVRAVAFDPSGRFLAIGSNSKTLRVCRSPSHRRPLLLQDND---------PVPEPQSVFTRPRLHKGSIYCLAWSPDSRLLATGSNDKTVRLL 1190 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14218.3322.1 >prot_H-canaliculatus_F_contig14218.3322.1 ID=prot_H-canaliculatus_F_contig14218.3322.1|Name=mRNA_H-canaliculatus_F_contig14218.3322.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=347bp GEWSGVTSLKKSGSPVKGSPPRIFPMDDDPTAVVDSGGGRSGAGGDGGNEback to top mRNA from alignment at H-canaliculatus_F_contig14218:245..2675- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14218.3322.1 ID=mRNA_H-canaliculatus_F_contig14218.3322.1|Name=mRNA_H-canaliculatus_F_contig14218.3322.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2431bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14218:245..2675- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14218:245..2675- >mRNA_H-canaliculatus_F_contig14218.3322.1 ID=mRNA_H-canaliculatus_F_contig14218.3322.1|Name=mRNA_H-canaliculatus_F_contig14218.3322.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2082bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14218:245..2675- (Hapterophycus canaliculatus Oshoro5f female)back to top |