mRNA_H-canaliculatus_F_contig14218.3322.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14218.3322.1
Unique NamemRNA_H-canaliculatus_F_contig14218.3322.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: D8LHR8_ECTSI (CTLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR8_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 5.340e-72
Identity = 148/273 (54.21%), Postives = 172/273 (63.00%), Query Frame = 1
Query:  199 DCHAFAFDRLSRDEAPRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWDLAGGVMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNV 1017
            D  ++AFDRL  DEA RF PT++VSGSHPVRSVGFSADG LFA G NDRTLRVC+TPSEA+LASNT   +S+S +Q W S EV+RREN H GSI+CL FSPDSSLLATGSNDK VRLLKLP        T     +XX        NG                        +    + LRGHTGTVRD+C+P   P+   P    P +SAS+ +LLSVGAGD+ACRVWD+ GG              + P+   RGHTDTVFSCSMLPGGNV
Sbjct:  690 DVDSYAFDRLVGDEASRFFPTILVSGSHPVRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTCGMDSDSPVQEWPSTEVIRRENHHLGSIFCLGFSPDSSLLATGSNDKLVRLLKLP------GTTPESQQQXXQQPGFSDRNGCD----------------------AEPSSLVLRGHTGTVRDLCYPLPPPTFAGP----PAASASSERLLSVGAGDYACRVWDVTGGXXX-----XXXXXXIAPLVLLRGHTDTVFSCSMLPGGNV 925          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A4Z2DH44_SCHJA (WD repeat-containing protein n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2DH44_SCHJA)

HSP 1 Score: 100 bits (250), Expect = 1.300e-19
Identity = 91/275 (33.09%), Postives = 124/275 (45.09%), Query Frame = 1
Query:  238 EAPRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFP-SLFPSALTPASPAPGSSASAGQLLSVGAGDFA--------CRVWDLAGGVMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
            ++P ++P  V+  S P+R + F   GRL+A GSN + LRVC+ P+   L+ N   T         S   ++RR+  HRGSIYC+A+SPD  L+ATGSND  +RLL++    T G   AA G+                                     + G  I LR H GTVRDI F    +PS+ T  S APGS      LLS GAGD           + +D      +    P S       V +  GHT  V+S S+   G++    SA
Sbjct:  758 QSPCYIPVTVLEDSQPIRCIAFHPSGRLYAVGSNSKFLRVCQYPNVQRLSPNHVAT---------SPVVLMRRQKYHRGSIYCVAWSPDGRLIATGSNDTTIRLLQMDP--TTGIPDAACGDPEIAS--------------------------------TAGYAIELRYHDGTVRDIAFLLGSYPSSDTNTS-APGS-----HLLSAGAGDSRIYLVDCNRAQTYDPTSSKST----PPSY-----VVRSMSGHTAAVYSLSVWSPGSLFVSGSA 974          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A654I6C3_9CEST (Uncharacterized protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654I6C3_9CEST)

HSP 1 Score: 98.6 bits (244), Expect = 2.660e-19
Identity = 87/281 (30.96%), Postives = 123/281 (43.77%), Query Frame = 1
Query:  244 PRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKL-PEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWD------LAGGVMSGGGGPGSLDGGMEP----------VATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
            PR++P  V+  S  +RSV F   G  +A GSN +TLRVCR P+      NT M + E+   +     V++R   HRGSIYC+A+S D  ++ATGSND +V LL++ PE     + + A   +                                         I L  H GTVRD+ F     ++ +  S A     +AG LL+ GAGD    V D      LA   +S GGG     GG  P          V    GH+ TV++ ++   G++    SA
Sbjct:   44 PRYLPVTVLEDSQAIRSVAFHPQGTFYAVGSNSKTLRVCRFPNI-----NTLMPDHEATAPL----VVMQRPKYHRGSIYCIAWSNDGRVIATGSNDTSVNLLRIDPETGCFSSVSDATSKKTENF-------------------------------------IQLTHHDGTVRDVAF---MLNSYSKGSEAVSGGGTAGYLLTAGAGDCRIYVVDVERASLLAQSSLSSGGGDTGNSGGTAPLRLKTSSAAVVRALSGHSATVYALTVWAPGSLFVSGSA 275          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A094ZT64_SCHHA (WD repeat-containing protein 47 n=9 Tax=Schistosoma TaxID=6181 RepID=A0A094ZT64_SCHHA)

HSP 1 Score: 98.6 bits (244), Expect = 7.760e-19
Identity = 88/266 (33.08%), Postives = 120/266 (45.11%), Query Frame = 1
Query:  238 EAPRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWDLAGGVMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
            + PR++P  ++  S P+R + F   GRL+A GSN + LRVC+ PS   L++N   T         S   ++RR+  H+GSIYC+A+SPD  ++ATGSND   RLL++    T G   AA G+                                     + G  I LR H GTVRDI F  L  S   P S    S+ S+  LLS GAGD    + D           P S       V +  GHT  V+S S+   G++    SA
Sbjct:  756 QTPRYIPVTILEDSQPIRCIAFHPSGRLYAVGSNSKFLRVCQYPSLQHLSANHVAT---------SPVVLMRRQKYHKGSIYCVAWSPDGRIIATGSNDTTTRLLQMDP--TTGIPDAACGDPEIAS--------------------------------TAGQAIELRYHDGTVRDIAF--LLGS--YPCSDTITSTPSS-HLLSAGAGDSRIYLVDCNRAQTFDLSTPKSTPPNYV-VRSMSGHTAAVYSLSVWSPGSLFVSGSA 972          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A7M3QFA5_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3QFA5_SPIER)

HSP 1 Score: 95.9 bits (237), Expect = 6.190e-18
Identity = 86/281 (30.60%), Postives = 122/281 (43.42%), Query Frame = 1
Query:  244 PRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKL-PEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWD------LAGGVMSGGGGPGSLDGGMEP----------VATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
            PR++P  V+  S  +RSV F   G  +A GSN +TLRVCR P+      NT M + E+   +     V++R   HRGSIYC+A+S D  ++ATGSND +V LL++ PE     + + A   +                                         I L  H GTVRD+ F     ++ +  S A     +AG LL+ GAGD    V D      LA   +S GGG      G  P          V    GH+ TV++ ++   G++    SA
Sbjct:  731 PRYLPVTVLEDSQAIRSVAFHPQGTFYAVGSNSKTLRVCRFPNI-----NTLMPDHEATAPL----VVMQRPKYHRGSIYCIAWSNDGRVIATGSNDTSVNLLRVDPETGCFSSVSDATSKKTEHF-------------------------------------IQLTHHDGTVRDVAF---MLNSYSKGSEAVSGGGTAGYLLTAGAGDCRIYVVDVERASLLAQSSLSSGGGDTGNSAGTAPLRLKTPSAAVVRALSGHSATVYALTVWAPGSLFVSGSA 962          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A504YZI5_FASGI (WD repeat-containing protein 47 n=3 Tax=Fasciola TaxID=6191 RepID=A0A504YZI5_FASGI)

HSP 1 Score: 89.7 bits (221), Expect = 6.740e-16
Identity = 83/268 (30.97%), Postives = 121/268 (45.15%), Query Frame = 1
Query:  241 APRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVV-RRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWDLAGGVMSGGGGPGSLDG--GMEPVATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
            +PR++P  V+  S  +R V F   G+ +A GSN + LR+C+ P   D+           G  V ++  ++ RR   HRGSIYC+A+SPD  L+ATGSND  VRLL  P  +  G   AA G+                                     + G  I LR H GTVRD+ F  L P   + +S    S+A +  LL+ GAGD    + D +  V S     GS+        + +  GHT  V++ ++   G++    SA
Sbjct:  598 SPRYIPVTVLEDSQAIRCVAFHPGGQYYAVGSNSKFLRICQFPDIHDIR----------GDHVATAPFILMRRGKYHRGSIYCVAWSPDGGLIATGSNDTTVRLL--PMESQSGLPIAAHGDPSLAS--------------------------------TAGHAIELRHHDGTVRDLTF--LLPGYPSDSSTRV-STAESRHLLTAGAGDARICLVDCSR-VESADPSLGSIRPVHSGHVIRSMSGHTGPVYALAVWAPGSLFVSGSA 817          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A8J4SSJ1_9TREM (WD repeat-containing protein 47 n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4SSJ1_9TREM)

HSP 1 Score: 89.7 bits (221), Expect = 6.920e-16
Identity = 80/269 (29.74%), Postives = 120/269 (44.61%), Query Frame = 1
Query:  244 PRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKL-PEAATRGAATAAEGNEXXXXXXXXXLNGKQYGGXXXXXXXXXXXXXXXXXXRSGGGDIALRGHTGTVRDICFP-SLFPSALTPASPAP---GSSASAGQLLSVGAGDFACRVWDLAGGVMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNVRTGWSA 1035
            PR++P  V+  S  +R V F   G+ +A GSN + LRVC+ P    L ++   T         +   ++RR   HRGSIYC+A+SPD  L+ATGSND  VRLL + PE    G   AA G+                                     + G  + LR H GT+RD+ F  S +P+    +S +P    S+A++  LL+ GAGD    + D +          G        + +  GHT  V++ ++   G++    SA
Sbjct:  677 PRYLPVTVLEDSQAIRCVAFHPTGQFYAVGSNSKFLRVCQFPDVRTLRADHVPT---------APYILMRRPKYHRGSIYCVAWSPDGRLIATGSNDTTVRLLAMCPET---GLPEAANGD--------------------------------ISLANTAGQCVDLRHHDGTIRDLTFLLSTYPTEQVGSSASPRISNSTAASTHLLTAGAGDARICLVDCSRAEAVNPALGGQPTKPSHVIRSMSGHTAPVYALNVWSPGSLFVSGSA 901          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A267GU53_9PLAT (Uncharacterized protein (Fragment) n=5 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GU53_9PLAT)

HSP 1 Score: 89.7 bits (221), Expect = 7.060e-16
Identity = 54/107 (50.47%), Postives = 61/107 (57.01%), Query Frame = 1
Query:  241 APRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEAD---LASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLL 552
            A RFV    V  +  VR+V F   GR  A GSN +TLRVCR+PS      L  N           V   + V  R  LH+GSIYCLA+SPDS LLATGSNDK VRLL
Sbjct:  780 ADRFVAIATVHDAMAVRAVAFDPSGRFLAIGSNSKTLRVCRSPSHRRPLLLQDND---------PVPEPQSVFTRPRLHKGSIYCLAWSPDSRLLATGSNDKTVRLL 877          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: UPI00143D9DA2 (WD repeat-containing protein 47 isoform X3 n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D9DA2)

HSP 1 Score: 89.4 bits (220), Expect = 7.490e-16
Identity = 47/128 (36.72%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  172 YEGGAGYDPDCHAFAFDRLSRDEAPRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLK 555
            +EG  G DP       +  S    PRFVP   +     VR   F   G+L+A GSN +TLR+C  P  +D+  +          + +    + +R   H+GSIYCLA++PD  L+ATGSNDK V+L++
Sbjct:  289 FEGNVGKDPRPELDVSNGSSNGGRPRFVPVTALEDVQAVRCAEFHPHGKLYAVGSNSKTLRICAYPKLSDVRED---------HETYQPTVLFKRTKHHKGSIYCLAWTPDGQLMATGSNDKTVKLMR 407          
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Match: A0A1I8HM82_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HM82_9PLAT)

HSP 1 Score: 89.7 bits (221), Expect = 7.500e-16
Identity = 54/107 (50.47%), Postives = 61/107 (57.01%), Query Frame = 1
Query:  241 APRFVPTVVVSGSHPVRSVGFSADGRLFAAGSNDRTLRVCRTPSEAD---LASNTNMTNSESGLQVWSSEEVVRRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLL 552
            A RFV    V  +  VR+V F   GR  A GSN +TLRVCR+PS      L  N           V   + V  R  LH+GSIYCLA+SPDS LLATGSNDK VRLL
Sbjct: 1093 ADRFVAIATVHDAMAVRAVAFDPSGRFLAIGSNSKTLRVCRSPSHRRPLLLQDND---------PVPEPQSVFTRPRLHKGSIYCLAWSPDSRLLATGSNDKTVRLL 1190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14218.3322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHR8_ECTSI5.340e-7254.21CTLH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A4Z2DH44_SCHJA1.300e-1933.09WD repeat-containing protein n=2 Tax=Schistosoma j... [more]
A0A654I6C3_9CEST2.660e-1930.96Uncharacterized protein n=1 Tax=Sparganum prolifer... [more]
A0A094ZT64_SCHHA7.760e-1933.08WD repeat-containing protein 47 n=9 Tax=Schistosom... [more]
A0A7M3QFA5_SPIER6.190e-1830.60Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A504YZI5_FASGI6.740e-1630.97WD repeat-containing protein 47 n=3 Tax=Fasciola T... [more]
A0A8J4SSJ1_9TREM6.920e-1629.74WD repeat-containing protein 47 n=1 Tax=Paragonimu... [more]
A0A267GU53_9PLAT7.060e-1650.47Uncharacterized protein (Fragment) n=5 Tax=Macrost... [more]
UPI00143D9DA27.490e-1636.72WD repeat-containing protein 47 isoform X3 n=1 Tax... [more]
A0A1I8HM82_9PLAT7.500e-1650.47Uncharacterized protein n=1 Tax=Macrostomum lignan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14218contigH-canaliculatus_F_contig14218:245..2675 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.0
Seed ortholog evalue5.1e-65
Seed eggNOG ortholog2880.D8LHR8
Preferred nameWDR47
EggNOG free text desc.WD domain, G-beta repeat
EggNOG OGsKOG0641@1,KOG0641@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1042
Cds size1041
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14218.3322.1prot_H-canaliculatus_F_contig14218.3322.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14218 245..2675 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929171.5639153-CDS-H-canaliculatus_F_contig14218:244..7621622929171.5639153-CDS-H-canaliculatus_F_contig14218:244..762Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14218 245..762 -
1696845705.1065822-CDS-H-canaliculatus_F_contig14218:244..7621696845705.1065822-CDS-H-canaliculatus_F_contig14218:244..762Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14218 245..762 -
1622929171.5798454-CDS-H-canaliculatus_F_contig14218:1048..11711622929171.5798454-CDS-H-canaliculatus_F_contig14218:1048..1171Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14218 1049..1171 -
1696845705.119453-CDS-H-canaliculatus_F_contig14218:1048..11711696845705.119453-CDS-H-canaliculatus_F_contig14218:1048..1171Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14218 1049..1171 -
1622929171.5986924-CDS-H-canaliculatus_F_contig14218:1783..19351622929171.5986924-CDS-H-canaliculatus_F_contig14218:1783..1935Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14218 1784..1935 -
1696845705.1292686-CDS-H-canaliculatus_F_contig14218:1783..19351696845705.1292686-CDS-H-canaliculatus_F_contig14218:1783..1935Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14218 1784..1935 -
1622929171.6155717-CDS-H-canaliculatus_F_contig14218:2427..26751622929171.6155717-CDS-H-canaliculatus_F_contig14218:2427..2675Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14218 2428..2675 -
1696845705.142365-CDS-H-canaliculatus_F_contig14218:2427..26751696845705.142365-CDS-H-canaliculatus_F_contig14218:2427..2675Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14218 2428..2675 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14218.3322.1

>prot_H-canaliculatus_F_contig14218.3322.1 ID=prot_H-canaliculatus_F_contig14218.3322.1|Name=mRNA_H-canaliculatus_F_contig14218.3322.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=347bp
GEWSGVTSLKKSGSPVKGSPPRIFPMDDDPTAVVDSGGGRSGAGGDGGNE
GWGESKEYEGGAGYDPDCHAFAFDRLSRDEAPRFVPTVVVSGSHPVRSVG
FSADGRLFAAGSNDRTLRVCRTPSEADLASNTNMTNSESGLQVWSSEEVV
RRENLHRGSIYCLAFSPDSSLLATGSNDKAVRLLKLPEAATRGAATAAEG
NENDYDYDYDYLNGKQYGGGRGGGYTGGGGGGGGGSDRSGGGDIALRGHT
GTVRDICFPSLFPSALTPASPAPGSSASAGQLLSVGAGDFACRVWDLAGG
VMSGGGGPGSLDGGMEPVATFRGHTDTVFSCSMLPGGNVRTGWSAF*
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mRNA from alignment at H-canaliculatus_F_contig14218:245..2675-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14218.3322.1 ID=mRNA_H-canaliculatus_F_contig14218.3322.1|Name=mRNA_H-canaliculatus_F_contig14218.3322.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2431bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14218:245..2675- (Hapterophycus canaliculatus Oshoro5f female)
GGGGAGTGGTCGGGGGTGACATCGCTCAAGAAGTCCGGGTCGCCTGTCAA AGGAAGCCCGCCCCGGATTTTTCCGATGGATGATGACCCCACCGCCGTTG TCGATAGCGGAGGCGGCCGGAGCGGGGCCGGCGGCGATGGCGGAAATGAA GGATGGGGCGAAAGCAAGGAGTACGAAGGAGGGGCCGGGTACGACCCGGA CTGTCACGCATTCGCGTTCGACCGCCTCTCCAGAGACGAAGCGCCCAGGT GAGATGGACGGATCGCTTGCGCTCTAGACCTTTCACGGCTGGGGCCCGCT CGCTGTTAAATTTTTCTTGGATTTTTCGTTCGTCGTATCTGCTACCCGGT TGAGCTGATGATTTGTGCTTCGAGAGCTCGGCAACCGTGTTTTGGGGTAA GGGCACCGACGTTGCGAACGGGGTCTGTGGTCGGCTTCGTTCTCCCCCAA CCCTTTTCATGAAAAATAGAACAACACCGTAGGAACGCCTCCTCAGGTAC GTCGTGAGGGGCGTAGCTCAAGGCTTCTGTTGAACTCCAAGCAGCAGTGA GGGTTGATTGTTGTCCACCCTTCCTTTTTCGATTTTCTCCTGAATAATTA GTCATCCCCATTTCAATGTCTTCAGCACCACCAGTAGAAGAGACTTGGTT TTTGTCGCCTTGCTCCACAGTCTTGGGTGTGCCTCAAACGAACGTTATTG CTGCGTCACCCACTTCTTCTCCACGCAACGCCTTGCGCAGGTTTGTACCA ACCGTCGTGGTGAGCGGCTCGCATCCGGTGAGATCGGTGGGCTTTTCGGC TGACGGCAGACTGTTCGCAGCCGGGAGCAACGATCGGACGCTGCGCGTTT GCAGAACGCCCTCTGAAGCCGACCTTGCTTCCAACACCAACAGTGAGAGT CATGCTGAGGCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTCGTCGTCGTCGTCGTCGTCGTCCCGCTCGTTACCGTTTCGTCTGC GGTGGAGGCGATAGTGGCGTGGTACGACTGTGTTTCAAAGACAAACGTAA CAACACCGTTGGAACACCTCCTGAGGTACGCCGTGCGAGGTGTGACTCGA GGCCTCTGTTGAGCTCCAAACAACGAGGGTTCACTGATGGTGTAAGGGTG GGACAAAAACCTGAACAGAAAAGGCGGCGTGGTATTTCAGTCACCATACA TAATAAAGTTCCTCTGTCATGCACGACGGTGATCAGGACCGACCTGCTCT TCAAGCCGTGGCAGCTGTACTCTTGCATGTCACGTAATACATTAGGAAGG GCTCAACGGCGACACCGACTCCCCCTACAATCGTAGGGCATCCGCGGAAT GCGCGCACCGCTACAACGCACGTGGACTCCTCGGAACTCGCGATCACGCT CAACAGCGCAAGCAAAGCTTTCTGGACCCTCGCGCGCCATGCTCGTAGAT CGTACACGGGCTGTGCTTCTCATCTCGCCCTGTCTTGCCTGCTTGCTGCA CCAGTGACGAACAGCGAGAGCGGCCTGCAAGTGTGGTCTTCCGAGGAGGT CGTGAGGAGAGAAAACCTACACCGCGGCTCCATCTACTGCCTCGCCTTCA GCCCAGATTCGTCTCTCCTGGCCACGGGTGAGCAAGCTACCTGAACGGAA CGAGCGAGTTTACGCCTCTCTCCCGGAAGCTTCATAGAAAGCCGTTGATC ATAGCACACTCGGTTTTTGAGATAGCAGGGTTGCAGAGTCATACACCGCT GTGACCGAAGAAAGAATGCTCATGCTCTCTTCGGTGGCACGCCTTTTCCC CGGAAAACAAATGCCTGGATACGCACAACGCCGTGCTTATTCGTTCCGCT TCGGTTTCGCCGCGCCCCGCCCGATCTCTCTCCCCTCCCTCCCTCCCCGG TAACGAAAACAAGGATCAAACGACAAGGCGGTTAGGCTGCTCAAGCTCCC CGAGGCGGCGACCAGGGGAGCAGCGACAGCGGCAGAAGGCAACGAGAACG ACTACGACTACGACTACGACTACCTAAACGGGAAGCAATACGGCGGCGGC CGCGGCGGCGGCTACACCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGA CCGCAGCGGCGGGGGAGACATCGCCCTCCGAGGGCACACCGGGACGGTCC GCGATATCTGCTTCCCTTCCCTGTTCCCCTCCGCGCTGACCCCTGCCTCT CCGGCGCCGGGTTCTTCGGCGTCGGCGGGACAACTTCTCTCCGTGGGCGC GGGAGACTTCGCGTGCCGGGTTTGGGACTTGGCAGGAGGTGTCATGTCGG GGGGCGGGGGCCCGGGCTCGCTGGACGGAGGGATGGAGCCGGTGGCGACG TTCAGGGGACACACGGACACGGTATTTTCGTGCTCGATGCTTCCCGGTGG CAATGTGAGGACGGGATGGTCAGCTTTTTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14218:245..2675-

>mRNA_H-canaliculatus_F_contig14218.3322.1 ID=mRNA_H-canaliculatus_F_contig14218.3322.1|Name=mRNA_H-canaliculatus_F_contig14218.3322.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2082bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14218:245..2675- (Hapterophycus canaliculatus Oshoro5f female)
GGGGAGTGGTCGGGGGTGACATCGCTCAAGAAGTCCGGGTCGCCTGTCAA
AGGAAGCCCGCCCCGGATTTTTCCGATGGATGATGACCCCACCGCCGTTG
TCGATAGCGGAGGCGGCCGGAGCGGGGCCGGCGGCGATGGCGGAAATGAA
GGATGGGGCGAAAGCAAGGAGTACGAAGGAGGGGCCGGGTACGACCCGGA
CTGTCACGCATTCGCGTTCGACCGCCTCTCCAGAGACGAAGCGCCCAGGG
GGAGTGGTCGGGGGTGACATCGCTCAAGAAGTCCGGGTCGCCTGTCAAAG
GAAGCCCGCCCCGGATTTTTCCGATGGATGATGACCCCACCGCCGTTGTC
GATAGCGGAGGCGGCCGGAGCGGGGCCGGCGGCGATGGCGGAAATGAAGG
ATGGGGCGAAAGCAAGGAGTACGAAGGAGGGGCCGGGTACGACCCGGACT
GTCACGCATTCGCGTTCGACCGCCTCTCCAGAGACGAAGCGCCCAGGTTT
GTACCAACCGTCGTGGTGAGCGGCTCGCATCCGGTGAGATCGGTGGGCTT
TTCGGCTGACGGCAGACTGTTCGCAGCCGGGAGCAACGATCGGACGCTGC
GCGTTTGCAGAACGCCCTCTGAAGCCGACCTTGCTTCCAACACCAACAGT
TTGTACCAACCGTCGTGGTGAGCGGCTCGCATCCGGTGAGATCGGTGGGC
TTTTCGGCTGACGGCAGACTGTTCGCAGCCGGGAGCAACGATCGGACGCT
GCGCGTTTGCAGAACGCCCTCTGAAGCCGACCTTGCTTCCAACACCAACA
TGACGAACAGCGAGAGCGGCCTGCAAGTGTGGTCTTCCGAGGAGGTCGTG
AGGAGAGAAAACCTACACCGCGGCTCCATCTACTGCCTCGCCTTCAGCCC
AGATTCGTCTCTCCTGGCCACGGTGACGAACAGCGAGAGCGGCCTGCAAG
TGTGGTCTTCCGAGGAGGTCGTGAGGAGAGAAAACCTACACCGCGGCTCC
ATCTACTGCCTCGCCTTCAGCCCAGATTCGTCTCTCCTGGCCACGGGATC
AAACGACAAGGCGGTTAGGCTGCTCAAGCTCCCCGAGGCGGCGACCAGGG
GAGCAGCGACAGCGGCAGAAGGCAACGAGAACGACTACGACTACGACTAC
GACTACCTAAACGGGAAGCAATACGGCGGCGGCCGCGGCGGCGGCTACAC
CGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGACCGCAGCGGCGGGGGAG
ACATCGCCCTCCGAGGGCACACCGGGACGGTCCGCGATATCTGCTTCCCT
TCCCTGTTCCCCTCCGCGCTGACCCCTGCCTCTCCGGCGCCGGGTTCTTC
GGCGTCGGCGGGACAACTTCTCTCCGTGGGCGCGGGAGACTTCGCGTGCC
GGGTTTGGGACTTGGCAGGAGGTGTCATGTCGGGGGGCGGGGGCCCGGGC
TCGCTGGACGGAGGGATGGAGCCGGTGGCGACGTTCAGGGGACACACGGA
CACGGTATTTTCGTGCTCGATGCTTCCCGGTGGCAATGTGAGGACGGGAT
GGTCAGCTTTTTGAGATCAAACGACAAGGCGGTTAGGCTGCTCAAGCTCC
CCGAGGCGGCGACCAGGGGAGCAGCGACAGCGGCAGAAGGCAACGAGAAC
GACTACGACTACGACTACGACTACCTAAACGGGAAGCAATACGGCGGCGG
CCGCGGCGGCGGCTACACCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCG
ACCGCAGCGGCGGGGGAGACATCGCCCTCCGAGGGCACACCGGGACGGTC
CGCGATATCTGCTTCCCTTCCCTGTTCCCCTCCGCGCTGACCCCTGCCTC
TCCGGCGCCGGGTTCTTCGGCGTCGGCGGGACAACTTCTCTCCGTGGGCG
CGGGAGACTTCGCGTGCCGGGTTTGGGACTTGGCAGGAGGTGTCATGTCG
GGGGGCGGGGGCCCGGGCTCGCTGGACGGAGGGATGGAGCCGGTGGCGAC
GTTCAGGGGACACACGGACACGGTATTTTCGTGCTCGATGCTTCCCGGTG
GCAATGTGAGGACGGGATGGTCAGCTTTTTGA
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