mRNA_H-canaliculatus_F_contig14067.3217.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: A0A0C6FPM0_9HYPH (Uncharacterized protein n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0C6FPM0_9HYPH) HSP 1 Score: 70.5 bits (171), Expect = 1.010e-14 Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query: 1 TRNILRKEVIQPQVPLRLPCYDFTPVADPTVAACP 105
T +ILRKEVIQPQVPLRLPCYDFTPVADPTV ACP
Sbjct: 15 TNSILRKEVIQPQVPLRLPCYDFTPVADPTVVACP 49
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: A0A0N9HTQ9_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium 5G12 TaxID=1701325 RepID=A0A0N9HTQ9_9BACT) HSP 1 Score: 68.9 bits (167), Expect = 2.730e-14 Identity = 33/46 (71.74%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 7 NILRKEVIQPQVPLRLPCYDFTPVADPTVAACPPEGLAQRRRVEPT 144
I RKEVIQPQ+PLRLPCYDFTP+ DPT C P GLA R RV PT
Sbjct: 21 EIPRKEVIQPQLPLRLPCYDFTPITDPTFDGCLPCGLAHRLRVLPT 66
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: X8E3E5_MYCXE (Uncharacterized protein n=1 Tax=Mycobacterium xenopi 4042 TaxID=1299334 RepID=X8E3E5_MYCXE) HSP 1 Score: 64.3 bits (155), Expect = 1.140e-12 Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 16 RKEVIQPQVPLRLPCYDFTPVADPTVAACPPEGLAQRRRVEPT 144
RKEVIQP +P+RLPCYDF P+ADPT A P GL QR RV PT
Sbjct: 4 RKEVIQPHLPVRLPCYDFVPIADPTFDASLPNGLGQRLRVLPT 46
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: A0A0J7YQQ7_BETVV (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A0J7YQQ7_BETVV) HSP 1 Score: 64.7 bits (156), Expect = 2.310e-12 Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 1
Query: 7 NILRKEVIQPQVPLRLPCYDFTPVADPTVAAC 102
ILRKEVIQPQVPLRLPCYDFTPVADPTV +C
Sbjct: 24 QILRKEVIQPQVPLRLPCYDFTPVADPTVVSC 55
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: A0A0P0YVL6_9HYPH (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A0P0YVL6_9HYPH) HSP 1 Score: 64.3 bits (155), Expect = 4.390e-12 Identity = 31/41 (75.61%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 10 ILRKEVIQPQVPLRLPCYDFTPVADPTVAAC------PPEG 114
+LRKEVIQPQVPLRLPCYDFTPVADPTV C PP G
Sbjct: 37 VLRKEVIQPQVPLRLPCYDFTPVADPTVVGCLLAVSAPPSG 77
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: F2AB39_RHIET (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=F2AB39_RHIET) HSP 1 Score: 63.5 bits (153), Expect = 4.650e-12 Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 1
Query: 7 NILRKEVIQPQVPLRLPCYDFTPVADPTVAAC 102
+ LRKEVIQPQVPLRLPCYDFTPVADPTV +C
Sbjct: 10 SFLRKEVIQPQVPLRLPCYDFTPVADPTVVSC 41
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: A0A330LZK0_9GAMM (Uncharacterized protein n=1 Tax=Shewanella benthica TaxID=43661 RepID=A0A330LZK0_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 1.010e-11 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 19 KEVIQPQVPLRLPCYDFTPVADPTVAACPPEGLAQRRRVEPTPMV 153
KEVIQPQVPL LPCYDFTPV + TV PEGL+ V+PTPMV
Sbjct: 8 KEVIQPQVPLGLPCYDFTPVMNHTVVNALPEGLSYLLLVQPTPMV 52
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: G7ZB01_AZOL4 (Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) TaxID=862719 RepID=G7ZB01_AZOL4) HSP 1 Score: 60.5 bits (145), Expect = 9.800e-11 Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 7 NILRKEVIQPQVPLRLPCYDFTPVADPTVAAC 102
LRKEVIQPQVPLRLPCYDFTPVAD TVA C
Sbjct: 20 GFLRKEVIQPQVPLRLPCYDFTPVADLTVAGC 51
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: A0A6A5L485_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L485_LUPAL) HSP 1 Score: 63.5 bits (153), Expect = 1.170e-10 Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 1
Query: 7 NILRKEVIQPQVPLRLPCYDFTPVADPTVAAC 102
+ LRKEVIQPQVPLRLPCYDFTPVADPTV +C
Sbjct: 194 SFLRKEVIQPQVPLRLPCYDFTPVADPTVVSC 225
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Match: D9VQ42_9ACTN (Uncharacterized protein (Fragment) n=3 Tax=Streptomyces TaxID=1883 RepID=D9VQ42_9ACTN) HSP 1 Score: 57.0 bits (136), Expect = 9.080e-10 Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 10 ILRKEVIQPQVPLRLPCYDFTPVADPTVAACPPEGLAQRRRV 135
+LRKEVIQP +P+RLPCYDF P+A PT + P GL R RV
Sbjct: 8 LLRKEVIQPHLPVRLPCYDFVPIAGPTFDSSLPYGLGHRLRV 49 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14067.3217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14067.3217.1 >prot_H-canaliculatus_F_contig14067.3217.1 ID=prot_H-canaliculatus_F_contig14067.3217.1|Name=mRNA_H-canaliculatus_F_contig14067.3217.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=52bp TRNILRKEVIQPQVPLRLPCYDFTPVADPTVAACPPEGLAQRRRVEPTPMback to top mRNA from alignment at H-canaliculatus_F_contig14067:2586..2741+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14067.3217.1 ID=mRNA_H-canaliculatus_F_contig14067.3217.1|Name=mRNA_H-canaliculatus_F_contig14067.3217.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=156bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14067:2586..2741+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14067:2586..2741+ >mRNA_H-canaliculatus_F_contig14067.3217.1 ID=mRNA_H-canaliculatus_F_contig14067.3217.1|Name=mRNA_H-canaliculatus_F_contig14067.3217.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=312bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14067:2586..2741+ (Hapterophycus canaliculatus Oshoro5f female)back to top |