mRNA_H-canaliculatus_F_contig13752.2996.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: D7FHI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI8_ECTSI) HSP 1 Score: 118 bits (296), Expect = 7.580e-29 Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 4 VSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDG-DVFSVGGSID 282
+ +ADLDGD +LDL+V SYW D+VRWY+NEDGKG FSEA D+++ GAG + VGDLDGDG DVVVA Q+TWF NLDG FSVG ID
Sbjct: 104 IFAADLDGDEDLDLLVGSYWNDWVRWYENEDGKGAFSEAMDVASGYGGAGSIDVGDLDGDGSPDVVVAFQTSFQLTWFSNLDGLGEFSVGTDID 197
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: D7FHI7_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI7_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.280e-24 Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 4 VSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDG-DVFSVGGSID 282
V +ADLD DG+LDL+V +Y D+VRWY+NEDGKGTFSEA D+++ GA + VGDL+GDG DVVVA Q+TWF NL G FSVG ID
Sbjct: 65 VFAADLDDDGDLDLLVGTYVEDWVRWYENEDGKGTFSEAVDVASGYGGAASIDVGDLNGDGSPDVVVAFQTTFQLTWFSNLYGLGEFSVGADID 158
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: A0A1F3PQL1_9BACT (Por_Secre_tail domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3PQL1_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 3.550e-19 Identity = 39/84 (46.43%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 4 VSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDGD 255
+ SAD+DGDG++D++ S+ D + WY+N DG GTF I+TD+NGA + D+DGDG +DV+ A S D++I W+ N DG+
Sbjct: 349 ICSADIDGDGDMDVLSASFHDDKIAWYENTDGSGTFGTQQSITTDANGARDVCCADIDGDGDMDVLSASSTDDKIAWYENTDGN 432
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: A0A4P7PTH1_9FLAO (Por_Secre_tail domain-containing protein n=1 Tax=Flavobacterium sangjuense TaxID=2518177 RepID=A0A4P7PTH1_9FLAO) HSP 1 Score: 91.7 bits (226), Expect = 5.010e-19 Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 4 VSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADI-STDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDG 252
V++ DLDGDG+ D+V SYW D + W++N DG+G + I ST NGA + +GD++GDGF DV+ LDN + WFRN DG
Sbjct: 391 VAADDLDGDGDKDIVAASYWDDKISWFRNLDGQGNYYNTQTILSTALNGASSVFIGDVNGDGFKDVLATAYLDNDVVWFRNTDG 474
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: A0A1W9LJS4_9DELT (Cadherin_4 domain-containing protein (Fragment) n=1 Tax=Desulfobacteraceae bacterium IS3 TaxID=1934248 RepID=A0A1W9LJS4_9DELT) HSP 1 Score: 91.3 bits (225), Expect = 6.770e-19 Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 4 VSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDG 252
V +AD+DGDG++D+V S W + + WY+N DGKG F ISTD+N A + GD+DGDG DVV A + DN+I W+ N DG
Sbjct: 340 VFAADVDGDGDIDVVSASAWDNKIAWYENTDGKGNFGSQKIISTDANWALSVFAGDIDGDGDADVVSASANDNKIAWYENTDG 422
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: UPI0013D69919 (FG-GAP-like repeat-containing protein n=1 Tax=Spartinivicinus ruber TaxID=2683272 RepID=UPI0013D69919) HSP 1 Score: 90.1 bits (222), Expect = 1.740e-18 Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 10 SADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDG 252
+AD+DGDG+LD+V S D + W++N DG GTF IS +GA + +GD+DGDG LDVV A +LD+ I WF N DG
Sbjct: 603 AADIDGDGDLDVVTASNLDDTIAWFENTDGLGTFGPENTISNTQDGAENVTIGDVDGDGDLDVVTASTLDDTIAWFENTDG 683
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: A0A6H5K481_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K481_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 2.880e-18 Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 4 VSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDGD-VFSVG 270
V AD+DGDG+ D++ S + D V WY+N DG+GTF+ DIS S+GA D+DGD +D+VVA D+++TWF+N DG F++G
Sbjct: 158 VKCADVDGDGDFDIISVSSFDDRVTWYENTDGEGTFAVGLDISATSSGADMAVAADIDGDEAVDIVVASFDDDRVTWFKNTDGKGAFALG 247
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: A0A5C6YYM0_9FLAO (T9SS type A sorting domain-containing protein n=1 Tax=Aequorivita antarctica TaxID=153266 RepID=A0A5C6YYM0_9FLAO) HSP 1 Score: 89.0 bits (219), Expect = 4.390e-18 Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 1 FVSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDGD 255
+V +AD+DGDG++D++ + D V WYKN DG G F IS++ +GAG + GD+DGDG LDV+ + D +WF+N+DG+
Sbjct: 492 WVYAADIDGDGDMDVLSAEPYNDTVNWYKNLDGLGNFGSRQTISSNLDGAGSVVAGDIDGDGDLDVLTSSRFDKTFSWFKNMDGN 576
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: UPI002004C737 (T9SS type A sorting domain-containing protein n=1 Tax=Subsaxibacter sp. CAU 1640 TaxID=2933271 RepID=UPI002004C737) HSP 1 Score: 88.2 bits (217), Expect = 8.180e-18 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 4 VSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDS-NGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDG 252
V + D+DGDG+ D+V SYW D + WY+N DG+G F I + NGA + VGD+DGDGF DV+ LD ++ W++NLDG
Sbjct: 392 VYADDIDGDGDKDIVAASYWDDKISWYENLDGQGNFYNTQKIIASTLNGATSVHVGDVDGDGFNDVLATSYLDYEVVWYKNLDG 475
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Match: UPI00156A8EF3 (T9SS type A sorting domain-containing protein n=1 Tax=Winogradskyella undariae TaxID=1285465 RepID=UPI00156A8EF3) HSP 1 Score: 88.2 bits (217), Expect = 8.190e-18 Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 4 VSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAGRLAVGDLDGDGFLDVVVARSLDNQITWFRNLDGD 255
V SADLDGDG++D++ SY D + WYKN DG+G FS I+T+++ A + V D+DGDG +DV+ A D++I W+ NLDG+
Sbjct: 92 VFSADLDGDGDMDILSASYNDDKIAWYKNLDGEGQFSSEIIITTNADNARSVYVSDVDGDGDMDVMSASRNDDKIAWYENLDGE 175 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13752.2996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13752.2996.1 >prot_H-canaliculatus_F_contig13752.2996.1 ID=prot_H-canaliculatus_F_contig13752.2996.1|Name=mRNA_H-canaliculatus_F_contig13752.2996.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=126bp FVSSADLDGDGNLDLVVCSYWGDFVRWYKNEDGKGTFSEAADISTDSNGAback to top mRNA from alignment at H-canaliculatus_F_contig13752:232..1211- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13752.2996.1 ID=mRNA_H-canaliculatus_F_contig13752.2996.1|Name=mRNA_H-canaliculatus_F_contig13752.2996.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=980bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13752:232..1211- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13752:232..1211- >mRNA_H-canaliculatus_F_contig13752.2996.1 ID=mRNA_H-canaliculatus_F_contig13752.2996.1|Name=mRNA_H-canaliculatus_F_contig13752.2996.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=756bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13752:232..1211- (Hapterophycus canaliculatus Oshoro5f female)back to top |