mRNA_H-canaliculatus_F_contig1357.2883.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI) HSP 1 Score: 971 bits (2509), Expect = 0.000e+0 Identity = 487/518 (94.02%), Postives = 505/518 (97.49%), Query Frame = 1
Query: 1 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVEFSHVD 1554
MS+AQAVFRAFKLQGLG+RADAA+AIVRVV+REE ADEAVQAII + KARIERNEL+SNVVDVDTVSAVVA+LTSREQDL DSSTQMQNAF+RPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRV RHDLFRPPII SSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLED VTRLPLDLSNAHKTEG+FTEHCVVIVEGKM AGVFQVAMVGFPPIEAREDSLRALGR DLFGTGVNPQQMERMRQLE+KATDAMFVIVSDV+LDKPQVMEKLEALF+GFQYAQPPPHFV MGNF SSPITHA DSVAQAVARFDSLCKLILKFP LASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFR+DILKKMQRHALFPPSDPDMD+TEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPH+AVLADRTEQYRW+L+DCCSLNPGSFPSD+SFVVYRPATRTVEFSHVD
Sbjct: 1 MSSAQAVFRAFKLQGLGLRADAARAIVRVVEREEGADEAVQAIIRSVKARIERNELSSNVVDVDTVSAVVADLTSREQDLADSSTQMQNAFVRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSNAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLELKATDAMFVIVSDVNLDKPQVMEKLEALFDGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAVARFDSLCKLILKFPDLASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFRDDILKKMQRHALFPPSDPDMDVTEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 518
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA) HSP 1 Score: 523 bits (1346), Expect = 3.660e-179 Identity = 271/522 (51.92%), Postives = 364/522 (69.73%), Query Frame = 1
Query: 1 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGA--GDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDP----DMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCC-SLNPGSFPSDASFVVYRPATRTVEFS 1545
M + + +AF+LQGL + +A KAI+ V++ EED+ A+ A+ISA K +IER EL S V+D V+AV +L++ E DL +S ++ NAF RL++DP+R +L E R +H E+K M R+R L+++QR RH+LFR P+IASSR++ IKL+ LDSL+GS + ++GMLTQP EG Y +EDL ++P+D+S A T G+FTE+CVV+ EG+M G F++ M+GFPP E R+ + A+G+ DLFGTG+ QQ+E + LE A ++MF+++SDV LDKP VMEKL +FEGF PP FV MG+FSS+PI +SVAQ +FD+L LI +FPALA A FV VPGP DP G LPR P+P YF + L E + + AT+PCRLRF+TQE+V FR+DI KKMQRH + PP +P +MD +EH KTLL QGHLCPLPLS+RPIH + D AL LYPLP + +LADR+EQ+ W D ++NPGSFPSD SFVVYRP++ VEFS
Sbjct: 1 MGLMRQIAQAFRLQGLQLTGEAMKAIISVIESEEDSAAALGAVISAIKDKIERKELRSTVIDEAAVAAVAIDLSNTEDDLARASLKVLNAFEGARLWYDPLRKSLQWETQEQRTSVLHAGPEAKGEMLRDRLLLMQQRTQRHELFRAPVIASSRKDTIKLTSLDSLLGSHGGKCIMGMLTQPSEGAYHIEDLTCQVPIDVSGAGYTAGMFTENCVVVAEGEMVDGAFRIDMMGFPPPELRKATALAIGQPDLFGTGMTHQQVELLDNLEGDAEESMFILLSDVHLDKPAVMEKLRVIFEGFSDMPEPPLFVLMGDFSSAPINQTSESVAQMADKFDALGSLIAEFPALAQHANFVIVPGPNDPATIGGMALPRGPIPRYFAKGLVERVSNVHLATSPCRLRFYTQEIVLFRDDIFKKMQRHCIVPPKNPPDAPNMDASEHLVKTLLDQGHLCPLPLSSRPIHCQFDAALRLYPLPQVVILADRSEQFSWQYHDSTWAINPGSFPSDFSFVVYRPSSGDVEFS 522
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A7S4I565_9STRA (DNA polymerase epsilon subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I565_9STRA) HSP 1 Score: 425 bits (1092), Expect = 2.150e-140 Identity = 229/523 (43.79%), Postives = 339/523 (64.82%), Query Frame = 1
Query: 19 VFRAFKLQGLGIRADAAKAIVRVVDREED--ADEAVQAIISATKARI----ERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIK------LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAH-KTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQ--DLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDMDI------TEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRP 1521
V RAFK++GL ++A A A++ V+ RE A E + I+ K R+ ++L+ VV +S VVA+++ D TD + Q+ +AF PRL +D +R L + +RS+ A KA MY +R+ +++QR+ R DLFRP ++ + R + L+P++SL+G + L++LLGM+ Q EEG+Y+LED ++P+DL+ A T+G TE+C+V+VEG+M G+FQV +G P IE R+D+L A+G Q D+F + + + E+MR+ E++ D FVI+SD+ LD P V EKLE +F+ +Q P P FVFMGNFSS P+T A + V+ F+ L LI ++P LA +F+FVPGP DPG G LPRPP+PA+FT ++R + HA+F +NPCR+R+F+QE+VF R+DI+ K++R+AL PS+ D+D +H K++L QGHL PLP S PI W+ D AL LYPLP+ ++ DR +Q ++C ++NPGSFPSD SFVVYRP
Sbjct: 11 VARAFKMRGLAVQASALDAMLNVLKRESPHTAQETLHMILDEIKERMMSSSNTSQLSQLVVTKRLLSDVVADMSRDGGDFTDEAVQLLDAFQMPRLAYDSMRKQFTLMTDSSEERSLFAEAPHKADMYAQRYGLIQQRILRQDLFRPRLVTADGRRSDESNATHVLTPVESLLGQSGLKFLLGMIVQVEEGRYYLEDTTAQVPMDLTGAEILTDGFITENCIVLVEGEMVDGIFQVVRMGHPIIETRQDALDAIGLQNTDIFNSMSSLAEQEKMREQEIRHGQDGEFVILSDLHLDNPVVFEKLEKMFDAYQDLTPLPIFVFMGNFSSKPLTSAREGPKMMVSYFEELANLIGQYPKLAKEGRFIFVPGPNDPGMGSVLPRPPIPAFFTGAIRSKVPHANFVSNPCRMRYFSQEIVFCRQDIVNKLRRNALISPSNGDIDKEDEQRPVQHALKSMLDQGHLSPLPQSFSPICWQYDHALRLYPLPNALIVGDRVKQCYESYAECDAVNPGSFPSDFSFVVYRP 533
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A7S1GD26_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD26_9STRA) HSP 1 Score: 398 bits (1022), Expect = 2.610e-130 Identity = 211/475 (44.42%), Postives = 303/475 (63.79%), Query Frame = 1
Query: 10 AQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPD--MDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLAD 1428
A+ V AFK +G+ RADA +A+ V+ RE + DEA+ +II + TV VVAELT E+D+ S ++ P+ ++ R T DA +H PAE+ M+RER+ +V QRV R+ +F PP++ SS+REY +L+PL+SL+G+ +++LGML QPEEG+Y +ED +R+P+DLS A T G+FTE +V+ +G++ G F VAM+GFPP E R DSL A+G D G P ++ +++ LE +A +MFVI+SDV LD P+V +K++AL EGF P VFMGNF S+P H D L LI +P+LA+ +KFVFVPG DPG G LPR P+PA FT++LR +++ FA+NPCRLRF++Q++V FR D++ KM+RHA+ PP+D +ITEH +T++ QGHLCP+ + +P++W D AL LYPLP +A+LAD
Sbjct: 49 AKKVHHAFKFRGMSARADAVRAVASVLQREPEPDEAMDSIIDXXXXXXXXXXXXXXXXXLATVEQVVAELTRDEEDIAQESIRVFQTADVPKFLYNAARKTFYKVDAPA---GLHCPAETNIAMWRERYQLVEQRVLRNAMFSPPVLGSSKREYFQLTPLESLLGTTGTKYVLGMLVQPEEGRYCIEDQSSRVPIDLSAASTTSGLFTECSIVLAQGELREGTFHVAMMGFPPPEKRVDSLLAMGTVDPMGLLTTPHELRKVQALEEEAEASMFVILSDVHLDNPRVFDKVQALLEGFADVVPDV-IVFMGNFISAPFGHGADDRRLYAENLTRLADLIAGYPSLANGSKFVFVPGLDDPG-GSVLPRAPIPAVFTKALRAQVRNVEFASNPCRLRFYSQDIVLFRHDLVSKMRRHAVVPPTDAHGTFEITEHLVRTVVDQGHLCPMAPTVQPVYWGKDHALRLYPLPQVAILAD 518
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: B8C9U5_THAPS (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9U5_THAPS) HSP 1 Score: 388 bits (996), Expect = 1.330e-126 Identity = 214/507 (42.21%), Postives = 319/507 (62.92%), Query Frame = 1
Query: 31 FKLQGLGIRADAAKAIVRVVDREEDA--DEAVQAIISATKARIER---NELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPII-ASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHK-TEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQ--DLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRP 1521
FK++GL I+A A +I+ V+ E D+ + AII K ++ + VV D + VVA+++ +D+T+ + Q+ +AF PRL +D +R L + G +S+ G A K M+ +R+ ++ QR+ R D+F+P +I A L+P++SL+G + R+LLGM+ Q EEGKY+LED +++ L+ S A T+G TE+ VV+VEG+ GV V +G P +E R DS++A+G Q D+F + + ++E++R E+K D MFV++SDV LD P V+EK+E + EG+ P P FVFMGNF+S P++ A D + F+ L +I KFP +A+ +FVFVPGP DPG LPR P+P +FT SLR +KHA FA+NPCR+RFF++E+VFFR+D++ KM+RH L P +++ KT+L QGHL PLPLSA PI+W+ D AL LYP P ++ DR +QY +C ++NPG F + +FVVYRP
Sbjct: 1 FKMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKEKMTTVGGGGMNQCVVTTDLLEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRKVFSLVEGG---KSVCGEAVDKVDMFSQRYSLIHQRILRQDIFQPKLITARGGGTTHTLTPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTSQVLLNFSQASLLTDGFVTENSVVLVEGEAIDGVLHVHHMGNPIVENRSDSIKAIGLQNTDIFNSIGSLSELEKLRDQEMKHGQDGMFVVLSDVHLDSPAVIEKIELMLEGYSDFTPLPIFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVITKFPNIAAEGRFVFVPGPNDPGITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFFSKEIVFFRDDLVGKMRRHCLLQPRSSVHKLSQFAVKTVLDQGHLSPLPLSASPIYWQHDHALRLYPFPDALIVGDRVDQYYENYEECDAINPGPFSAGFNFVVYRP 504
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A6V2A035_9STRA (DNA polymerase II subunit 2 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A035_9STRA) HSP 1 Score: 386 bits (991), Expect = 1.820e-124 Identity = 238/575 (41.39%), Postives = 332/575 (57.74%), Query Frame = 1
Query: 19 VFRAFKLQGLGIRADAAKAIVRVVDREE---DADEAVQAIISATKARIERNELASN----VVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLL-----EDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPII----------------ASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAH-KTEGIFTEHCVVIVEGKMA-AGVFQVAMVGFPPIEAREDSLRALGRQ--DLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSS---SPITHAPDSVAQA-VARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDMD-------------------------------ITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVE 1539
V RAFK++GL I+ A ++ V+ REE + DE + AI+ K R+ N +++ VV ++ VVAELT D+ + + Q+ AF PRL FD +R L ED G KRS+ G A +K MY +RF +++QR+ R DLFRP ++ A S + ++P++SL+G ++ LLGM+ Q EEG+Y+LED ++P+DL+ T+ E+C+V+VEG++ AGV V +G P IE+R DSL A+G Q D+F + + ++E++R+ E++ D MFVI+SDV LD P VM L+ LFEGF+ QP P FVFMGNF S S + A S A+ V FD L LI K+PA+A +FVF+PGP D G +PRPPLP YFT SLR + HA F +NPCRLRFF++E+VF REDI+ +++R L P + D + + KTLL QGHLCPLPL + PI+W+ D AL LYPLP V+ADR EQY + C ++NPG F ++ SFVVYRP E
Sbjct: 24 VARAFKMRGLSIQTSALNGMMNVLRREENPMERDEKMYAILDEIKERMMMNRVSTGSGQLVVTEQLLADVVAELTRNGMDVAEEAVQLLGAFEMPRLAFDSMRKQFSLAAEAMEDGG--KRSLFGSATNKVDMYAQRFALIQQRIMRQDLFRPKLVTADGRYSNNTSDTAVNAGSNNKTHVITPIESLLGRTGIKVLLGMIVQVEEGRYYLEDHTGQVPMDLTQTEILTDCFLNENCIVLVEGEINDAGVLTVHRMGNPIIESRLDSLDAIGLQNSDIFSSISSLSELEKLREQEIEHGQDGMFVILSDVHLDNPAVMRNLDTLFEGFEGMQPLPLFVFMGNFVSRSLSALGVATSSGAKMMVGLFDELANLISKYPAIAKEGRFVFIPGPNDAGLTGIMPRPPLPNYFTASLRSKVPHAVFTSNPCRLRFFSKEIVFCREDIVSELKRSCLLAPPQEEEDPMDEDEVPLMTSETDYIEEGGGRGPSKNTQQVIKRTVKTLLDQGHLCPLPLPSCPIYWQYDHALRLYPLPDAVVVADRVEQYYENYAGCDAINPGPFHAEFSFVVYRPVCEVHE 596
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A6V0YVC1_9STRA (DNA polymerase epsilon subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0YVC1_9STRA) HSP 1 Score: 384 bits (985), Expect = 2.720e-124 Identity = 213/538 (39.59%), Postives = 326/538 (60.59%), Query Frame = 1
Query: 1 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREE-------DADEAVQAIISATK-ARIE-------RNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIK-------LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHK-TEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQ--DLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPP-SDPDMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRT 1533
MS + + R FK+ GL I+A A ++ VV RE D + + II K RI+ R+ N+V + VVA+ +D++D + Q+ +AF PRL FD +R L G +R+++G A +K M+ +R+ +++QR+ R D+F+P ++ + + ++P++SL+G + R+LLGM+ Q EEGKY+LED ++PL+ S A T+G TE+ VV++EG+ GV V +G P +E R DS++A+G Q D+F + + + E++R+ E++ D MFV++SDV LD P V+EK+E + EG+ P P FVFMGNF+S P++ A + ++ F+ L +I KFP +A+ +FVF+PGP DPG LPR P+P YFT +LR +K+ A+NPCR+RFFT+E+VFFR++++ KM+R+ L P D + ++ H KT+L QGHL PLPLS PI+W+ D AL LYP P + DR EQY +C ++NPG F + +FVVYRP T
Sbjct: 1 MSERKRLTRIFKMHGLSIQASALDTLLDVVQREAEVGRNKADVNNVIFNIIDEIKDRRIQGGNGSGGRSSSVGNIVTSALLEDVVADFRRDAKDVSDEAVQLLDAFHMPRLDFDRMRKNFSLVPFGKEERTLYGEAVAKVDMFNQRYALIQQRILRQDIFQPKLVTNRLARSAQNNGGTHTITPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTAQVPLNFSEASLLTDGFVTENSVVLIEGEAIDGVLHVHNMGSPIVENRLDSIKAIGLQNTDIFNSIGSLSEYEKLREQELEHGEDGMFVVLSDVYLDSPAVIEKIERMLEGYSDFNPLPIFVFMGNFTSKPLSSASEGTKAMISYFEDLANVICKFPNVANEGRFVFIPGPNDPGITGVLPRGPIPNYFTAALRSKVKNVMLASNPCRMRFFTKEIVFFRDNLVSKMRRNCLIEPRQDSNGQLSSHAIKTVLDQGHLSPLPLSTSPIYWQHDHALRLYPFPDALICGDRVEQYYETYEECDAINPGPFSNGFNFVVYRPVGET 538
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A8K1CHQ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHQ1_PYTOL) HSP 1 Score: 374 bits (959), Expect = 1.220e-120 Identity = 213/537 (39.66%), Postives = 326/537 (60.71%), Query Frame = 1
Query: 10 AQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRR-EYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPI-THAPDSVAQAVARF-DSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFP------------PSDPD-------MDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVEFSHVD 1554
A+ V RA KLQGL + DA + +V + E + + ++ A K I+R+++ S+VV ++ + + + L + ++ S Q+ +AF PRL ++ + L E R RS+H PAES+ ++ R+RF ++ RV R+ +F PP I+ S +YI+LS ++SL+G +R ++GML Q E +Y+LEDL +R+ ++L+NA T G+FT +CVV+VEG++ + V +GFPP E++ +S LG D G V+ QQ+E+++ LE A F+++SDV LD PQVM+ L+ LF+G + P F+ MG+F S+P+ A + + + + D L LILK+P LA +KFV VPGP DPG+ PR PLP+ T+ L + + TNPCR+R++TQ++V FRED+ +KM RHA+ P D D +DI++H KT++ Q HLCP+PL A PI+W D A+ L+PLP + +L D TEQY+ S +PG F D SFV+YRP+T T EFS V+
Sbjct: 3 AKQVLRACKLQGLSLHPDALRRLVDELTAEPTLE--LDNVVYALKNSIDRSKMTSSVVSLEALESALDTLLAVSEENQFESIQIFDAFTTPRLAYNSANS--LYELKADRHRSIHAPAESRLQLLRDRFQLIDLRVKRNKMFAPPAISVSNEVDYIELSKIESLLGVTGIRRVIGMLGQDERKRYYLEDLTSRIYIELNNATYTNGLFTLNCVVLVEGEVIDDLLHVHTMGFPPPESKAESKVILGGVDPLGVEVSAQQLEQIQALEASDHHATFIVLSDVHLDDPQVMQHLDLLFQGLESVLPS-LFILMGDFLSTPVGVGAGSNTLEDLKDYLDELGNLILKYPKLAEFSKFVLVPGPNDPGSSRAFPRHPLPSLCTRDLVRKVPNVICTTNPCRIRYYTQDLVIFREDLHQKMHRHAILPVLPDEVTEANGDAMDVDSGNTHAHVDISKHLVKTIIDQSHLCPMPLMAAPINWAFDSAMQLFPLPDVLILGDSTEQYQLGYSSVAVFHPGPFHVDFSFVLYRPSTNTTEFSRVE 534
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A1V9YX49_9STRA (DNA polymerase epsilon subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX49_9STRA) HSP 1 Score: 372 bits (955), Expect = 3.460e-120 Identity = 211/528 (39.96%), Postives = 321/528 (60.80%), Query Frame = 1
Query: 1 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASS--RREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPD--SVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFP------PSDPDMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVEFSHVD 1554
M+ A+ VFRAFKLQGL + ADA K ++R +D + ++ +I A K I+R++L ++VV + + + + L S + + Q+ +A +P+L ++ + T E R R +H E + ++RERF V +RV RH F P++A++ +REY++L+ ++SL+G + ++ +LGML Q E +LEDL R+ ++ G++T + VVIVEG++ VF V +G PP E R DS+ LG D G V+ QQM ++R+LE + A FVI+SDV LD PQVM++L+ LFEG+ P FV MGNF+S+P+ + D S+A D L ++LK+P+L +KFV VPGP DPGA LPR PLP T + A+ A+NPCR+R+FT+++V R+D+ KM+R+ L P D ++ KT++ QGHLCPL LSA+PIHW D +L L+PLP + VLAD+T+Q++ + +++PG F D SF++YRPAT E S +D
Sbjct: 1 MAAAKQVFRAFKLQGLTLHADALKRLLREMDEQPSV--LLEDVIYAIKNSIDRSKLTNSVVTQEALESALDTLLSVSTENDYQAIQVFSALEQPKLRYESLSKTY--EVVADRGRRLHAAPEYRVNLFRERFAAVERRVRRHKTFSKPVMATTSLQREYLELTRIESLLGVSGVKRVLGMLGQDERNNIYLEDLTARIYINTDKTICAPGMYTLNSVVIVEGQVRDDVFHVESMGGPPPEYRADSIAILGGLDPLGVEVSAQQMTQIRELEAQDDLASFVILSDVHLDDPQVMKRLDRLFEGYAPFCPT-LFVLMGNFTSTPVGYGQDAISIADFKELLDDLAAILLKYPSLVEHSKFVLVPGPDDPGAASVLPRHPLPDMCTTDFLRKIPSATMASNPCRIRYFTKDIVILRDDLQAKMRRNCLMPLEAAADDEDRTTTVSRQLVKTVIDQGHLCPLSLSAQPIHWAYDGSLQLFPLPDVLVLADKTDQFQVGYAGVAAIHPGPFYVDYSFMLYRPATAVTELSRID 523
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A833SQQ2_PHYIN (DNA polymerase epsilon subunit n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQQ2_PHYIN) HSP 1 Score: 371 bits (953), Expect = 9.100e-120 Identity = 213/532 (40.04%), Postives = 322/532 (60.53%), Query Frame = 1
Query: 19 VFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRR-EYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVAR--FDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDM-----------------DITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVEFSHVD 1554
V RA KLQGL + ADA + + ++ E A ++ +I A K I+R+++ S+VV ++ + + + L + + Q+ AF PRL+F+ N+ L A T +R GP E++ ++ R RF+ V RV R+ LF PP A + EY++LS ++SL+G + +R ++GML Q E +++LED +R+ +DL+NA T+G+FT +CVV+VEG++ V V +GFPP E +E SL LG D G V+ QQ E++R+LE A F+++SDV LD P VM KL+ LF+G + QP F+ MG+F S+ I S + R + L LILK+P +A +++F+ VPGP DPG+ PR PLP T+ L + + + +TNPCR+R++TQ++V FR+D+ +KMQRHA+ PP+ + DI++H KT++ Q HLCPLPL A PI+W+ D +L L+P P + +L D TEQY+ S +PG F +D SFV YRP+T T EFS V+
Sbjct: 6 VLRACKLQGLSLHADALRRLTEELNNE--ASLQLEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNMHNNSYDLR-ADTHRRLHAGP-EARIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTIEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLTNAAYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKEASLEGLGGIDPLGVEVSAQQREQIRELEASDHHAAFIVLSDVHLDDPLVMSKLDELFQGLESVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEELGSLILKYPGIAENSRFILVPGPNDPGSSRAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPTPSEQGEAMDEDGETVHSVSQTDISKHLAKTVIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSIGVFHPGPFHADYSFVFYRPSTNTTEFSRVE 532 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1357.2883.1 >prot_H-canaliculatus_F_contig1357.2883.1 ID=prot_H-canaliculatus_F_contig1357.2883.1|Name=mRNA_H-canaliculatus_F_contig1357.2883.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=519bp MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARback to top mRNA from alignment at H-canaliculatus_F_contig1357:16569..27308+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1357.2883.1 ID=mRNA_H-canaliculatus_F_contig1357.2883.1|Name=mRNA_H-canaliculatus_F_contig1357.2883.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10740bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1357:16569..27308+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1357:16569..27308+ >mRNA_H-canaliculatus_F_contig1357.2883.1 ID=mRNA_H-canaliculatus_F_contig1357.2883.1|Name=mRNA_H-canaliculatus_F_contig1357.2883.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3114bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1357:16569..27308+ (Hapterophycus canaliculatus Oshoro5f female)back to top |