prot_H-canaliculatus_F_contig1357.2883.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1357.2883.1
Unique Nameprot_H-canaliculatus_F_contig1357.2883.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length519
Homology
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI)

HSP 1 Score: 971 bits (2509), Expect = 0.000e+0
Identity = 487/518 (94.02%), Postives = 505/518 (97.49%), Query Frame = 0
Query:    1 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVEFSHVD 518
            MS+AQAVFRAFKLQGLG+RADAA+AIVRVV+REE ADEAVQAII + KARIERNEL+SNVVDVDTVSAVVA+LTSREQDL DSSTQMQNAF+RPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRV RHDLFRPPII SSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLED VTRLPLDLSNAHKTEG+FTEHCVVIVEGKM AGVFQVAMVGFPPIEAREDSLRALGR DLFGTGVNPQQMERMRQLE+KATDAMFVIVSDV+LDKPQVMEKLEALF+GFQYAQPPPHFV MGNF SSPITHA DSVAQAVARFDSLCKLILKFP LASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFR+DILKKMQRHALFPPSDPDMD+TEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPH+AVLADRTEQYRW+L+DCCSLNPGSFPSD+SFVVYRPATRTVEFSHVD
Sbjct:    1 MSSAQAVFRAFKLQGLGLRADAARAIVRVVEREEGADEAVQAIIRSVKARIERNELSSNVVDVDTVSAVVADLTSREQDLADSSTQMQNAFVRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSNAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLELKATDAMFVIVSDVNLDKPQVMEKLEALFDGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAVARFDSLCKLILKFPDLASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFRDDILKKMQRHALFPPSDPDMDVTEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 518          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA)

HSP 1 Score: 523 bits (1346), Expect = 3.660e-179
Identity = 271/522 (51.92%), Postives = 364/522 (69.73%), Query Frame = 0
Query:    1 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGA--GDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDP----DMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCC-SLNPGSFPSDASFVVYRPATRTVEFS 515
            M   + + +AF+LQGL +  +A KAI+ V++ EED+  A+ A+ISA K +IER EL S V+D   V+AV  +L++ E DL  +S ++ NAF   RL++DP+R +L  E    R   +H   E+K  M R+R L+++QR  RH+LFR P+IASSR++ IKL+ LDSL+GS   + ++GMLTQP EG Y +EDL  ++P+D+S A  T G+FTE+CVV+ EG+M  G F++ M+GFPP E R+ +  A+G+ DLFGTG+  QQ+E +  LE  A ++MF+++SDV LDKP VMEKL  +FEGF     PP FV MG+FSS+PI    +SVAQ   +FD+L  LI +FPALA  A FV VPGP DP    G  LPR P+P YF + L E + +   AT+PCRLRF+TQE+V FR+DI KKMQRH + PP +P    +MD +EH  KTLL QGHLCPLPLS+RPIH + D AL LYPLP + +LADR+EQ+ W   D   ++NPGSFPSD SFVVYRP++  VEFS
Sbjct:    1 MGLMRQIAQAFRLQGLQLTGEAMKAIISVIESEEDSAAALGAVISAIKDKIERKELRSTVIDEAAVAAVAIDLSNTEDDLARASLKVLNAFEGARLWYDPLRKSLQWETQEQRTSVLHAGPEAKGEMLRDRLLLMQQRTQRHELFRAPVIASSRKDTIKLTSLDSLLGSHGGKCIMGMLTQPSEGAYHIEDLTCQVPIDVSGAGYTAGMFTENCVVVAEGEMVDGAFRIDMMGFPPPELRKATALAIGQPDLFGTGMTHQQVELLDNLEGDAEESMFILLSDVHLDKPAVMEKLRVIFEGFSDMPEPPLFVLMGDFSSAPINQTSESVAQMADKFDALGSLIAEFPALAQHANFVIVPGPNDPATIGGMALPRGPIPRYFAKGLVERVSNVHLATSPCRLRFYTQEIVLFRDDIFKKMQRHCIVPPKNPPDAPNMDASEHLVKTLLDQGHLCPLPLSSRPIHCQFDAALRLYPLPQVVILADRSEQFSWQYHDSTWAINPGSFPSDFSFVVYRPSSGDVEFS 522          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A7S4I565_9STRA (DNA polymerase epsilon subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I565_9STRA)

HSP 1 Score: 425 bits (1092), Expect = 2.150e-140
Identity = 229/523 (43.79%), Postives = 339/523 (64.82%), Query Frame = 0
Query:    7 VFRAFKLQGLGIRADAAKAIVRVVDREED--ADEAVQAIISATKARI----ERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIK------LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAH-KTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQ--DLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDMDI------TEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRP 507
            V RAFK++GL ++A A  A++ V+ RE    A E +  I+   K R+      ++L+  VV    +S VVA+++    D TD + Q+ +AF  PRL +D +R    L    + +RS+   A  KA MY +R+ +++QR+ R DLFRP ++ +  R   +      L+P++SL+G + L++LLGM+ Q EEG+Y+LED   ++P+DL+ A   T+G  TE+C+V+VEG+M  G+FQV  +G P IE R+D+L A+G Q  D+F +  +  + E+MR+ E++   D  FVI+SD+ LD P V EKLE +F+ +Q   P P FVFMGNFSS P+T A +     V+ F+ L  LI ++P LA   +F+FVPGP DPG G  LPRPP+PA+FT ++R  + HA+F +NPCR+R+F+QE+VF R+DI+ K++R+AL  PS+ D+D        +H  K++L QGHL PLP S  PI W+ D AL LYPLP+  ++ DR +Q     ++C ++NPGSFPSD SFVVYRP
Sbjct:   11 VARAFKMRGLAVQASALDAMLNVLKRESPHTAQETLHMILDEIKERMMSSSNTSQLSQLVVTKRLLSDVVADMSRDGGDFTDEAVQLLDAFQMPRLAYDSMRKQFTLMTDSSEERSLFAEAPHKADMYAQRYGLIQQRILRQDLFRPRLVTADGRRSDESNATHVLTPVESLLGQSGLKFLLGMIVQVEEGRYYLEDTTAQVPMDLTGAEILTDGFITENCIVLVEGEMVDGIFQVVRMGHPIIETRQDALDAIGLQNTDIFNSMSSLAEQEKMREQEIRHGQDGEFVILSDLHLDNPVVFEKLEKMFDAYQDLTPLPIFVFMGNFSSKPLTSAREGPKMMVSYFEELANLIGQYPKLAKEGRFIFVPGPNDPGMGSVLPRPPIPAFFTGAIRSKVPHANFVSNPCRMRYFSQEIVFCRQDIVNKLRRNALISPSNGDIDKEDEQRPVQHALKSMLDQGHLSPLPQSFSPICWQYDHALRLYPLPNALIVGDRVKQCYESYAECDAVNPGSFPSDFSFVVYRP 533          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A7S1GD26_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD26_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 2.610e-130
Identity = 211/475 (44.42%), Postives = 303/475 (63.79%), Query Frame = 0
Query:    4 AQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPD--MDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLAD 476
            A+ V  AFK +G+  RADA +A+  V+ RE + DEA+ +II                  + TV  VVAELT  E+D+   S ++      P+  ++  R T    DA      +H PAE+   M+RER+ +V QRV R+ +F PP++ SS+REY +L+PL+SL+G+   +++LGML QPEEG+Y +ED  +R+P+DLS A  T G+FTE  +V+ +G++  G F VAM+GFPP E R DSL A+G  D  G    P ++ +++ LE +A  +MFVI+SDV LD P+V +K++AL EGF    P    VFMGNF S+P  H  D           L  LI  +P+LA+ +KFVFVPG  DPG G  LPR P+PA FT++LR  +++  FA+NPCRLRF++Q++V FR D++ KM+RHA+ PP+D     +ITEH  +T++ QGHLCP+  + +P++W  D AL LYPLP +A+LAD
Sbjct:   49 AKKVHHAFKFRGMSARADAVRAVASVLQREPEPDEAMDSIIDXXXXXXXXXXXXXXXXXLATVEQVVAELTRDEEDIAQESIRVFQTADVPKFLYNAARKTFYKVDAPA---GLHCPAETNIAMWRERYQLVEQRVLRNAMFSPPVLGSSKREYFQLTPLESLLGTTGTKYVLGMLVQPEEGRYCIEDQSSRVPIDLSAASTTSGLFTECSIVLAQGELREGTFHVAMMGFPPPEKRVDSLLAMGTVDPMGLLTTPHELRKVQALEEEAEASMFVILSDVHLDNPRVFDKVQALLEGFADVVPDV-IVFMGNFISAPFGHGADDRRLYAENLTRLADLIAGYPSLANGSKFVFVPGLDDPG-GSVLPRAPIPAVFTKALRAQVRNVEFASNPCRLRFYSQDIVLFRHDLVSKMRRHAVVPPTDAHGTFEITEHLVRTVVDQGHLCPMAPTVQPVYWGKDHALRLYPLPQVAILAD 518          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: B8C9U5_THAPS (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9U5_THAPS)

HSP 1 Score: 388 bits (996), Expect = 1.330e-126
Identity = 214/507 (42.21%), Postives = 319/507 (62.92%), Query Frame = 0
Query:   11 FKLQGLGIRADAAKAIVRVVDREEDA--DEAVQAIISATKARIER---NELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPII-ASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHK-TEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQ--DLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRP 507
            FK++GL I+A A  +I+ V+  E     D+ + AII   K ++       +   VV  D +  VVA+++   +D+T+ + Q+ +AF  PRL +D +R    L + G   +S+ G A  K  M+ +R+ ++ QR+ R D+F+P +I A        L+P++SL+G +  R+LLGM+ Q EEGKY+LED  +++ L+ S A   T+G  TE+ VV+VEG+   GV  V  +G P +E R DS++A+G Q  D+F +  +  ++E++R  E+K   D MFV++SDV LD P V+EK+E + EG+    P P FVFMGNF+S P++ A D     +  F+ L  +I KFP +A+  +FVFVPGP DPG    LPR P+P +FT SLR  +KHA FA+NPCR+RFF++E+VFFR+D++ KM+RH L  P      +++   KT+L QGHL PLPLSA PI+W+ D AL LYP P   ++ DR +QY     +C ++NPG F +  +FVVYRP
Sbjct:    1 FKMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKEKMTTVGGGGMNQCVVTTDLLEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRKVFSLVEGG---KSVCGEAVDKVDMFSQRYSLIHQRILRQDIFQPKLITARGGGTTHTLTPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTSQVLLNFSQASLLTDGFVTENSVVLVEGEAIDGVLHVHHMGNPIVENRSDSIKAIGLQNTDIFNSIGSLSELEKLRDQEMKHGQDGMFVVLSDVHLDSPAVIEKIELMLEGYSDFTPLPIFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVITKFPNIAAEGRFVFVPGPNDPGITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFFSKEIVFFRDDLVGKMRRHCLLQPRSSVHKLSQFAVKTVLDQGHLSPLPLSASPIYWQHDHALRLYPFPDALIVGDRVDQYYENYEECDAINPGPFSAGFNFVVYRP 504          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A6V2A035_9STRA (DNA polymerase II subunit 2 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A035_9STRA)

HSP 1 Score: 386 bits (991), Expect = 1.820e-124
Identity = 238/575 (41.39%), Postives = 332/575 (57.74%), Query Frame = 0
Query:    7 VFRAFKLQGLGIRADAAKAIVRVVDREE---DADEAVQAIISATKARIERNELASN----VVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLL-----EDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPII----------------ASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAH-KTEGIFTEHCVVIVEGKMA-AGVFQVAMVGFPPIEAREDSLRALGRQ--DLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSS---SPITHAPDSVAQA-VARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDMD-------------------------------ITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVE 513
            V RAFK++GL I+  A   ++ V+ REE   + DE + AI+   K R+  N +++     VV    ++ VVAELT    D+ + + Q+  AF  PRL FD +R    L     ED G  KRS+ G A +K  MY +RF +++QR+ R DLFRP ++                A S  +   ++P++SL+G   ++ LLGM+ Q EEG+Y+LED   ++P+DL+     T+    E+C+V+VEG++  AGV  V  +G P IE+R DSL A+G Q  D+F +  +  ++E++R+ E++   D MFVI+SDV LD P VM  L+ LFEGF+  QP P FVFMGNF S   S +  A  S A+  V  FD L  LI K+PA+A   +FVF+PGP D G    +PRPPLP YFT SLR  + HA F +NPCRLRFF++E+VF REDI+ +++R  L  P   + D                               + +   KTLL QGHLCPLPL + PI+W+ D AL LYPLP   V+ADR EQY    + C ++NPG F ++ SFVVYRP     E
Sbjct:   24 VARAFKMRGLSIQTSALNGMMNVLRREENPMERDEKMYAILDEIKERMMMNRVSTGSGQLVVTEQLLADVVAELTRNGMDVAEEAVQLLGAFEMPRLAFDSMRKQFSLAAEAMEDGG--KRSLFGSATNKVDMYAQRFALIQQRIMRQDLFRPKLVTADGRYSNNTSDTAVNAGSNNKTHVITPIESLLGRTGIKVLLGMIVQVEEGRYYLEDHTGQVPMDLTQTEILTDCFLNENCIVLVEGEINDAGVLTVHRMGNPIIESRLDSLDAIGLQNSDIFSSISSLSELEKLREQEIEHGQDGMFVILSDVHLDNPAVMRNLDTLFEGFEGMQPLPLFVFMGNFVSRSLSALGVATSSGAKMMVGLFDELANLISKYPAIAKEGRFVFIPGPNDAGLTGIMPRPPLPNYFTASLRSKVPHAVFTSNPCRLRFFSKEIVFCREDIVSELKRSCLLAPPQEEEDPMDEDEVPLMTSETDYIEEGGGRGPSKNTQQVIKRTVKTLLDQGHLCPLPLPSCPIYWQYDHALRLYPLPDAVVVADRVEQYYENYAGCDAINPGPFHAEFSFVVYRPVCEVHE 596          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A6V0YVC1_9STRA (DNA polymerase epsilon subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0YVC1_9STRA)

HSP 1 Score: 384 bits (985), Expect = 2.720e-124
Identity = 213/538 (39.59%), Postives = 326/538 (60.59%), Query Frame = 0
Query:    1 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREE-------DADEAVQAIISATK-ARIE-------RNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRREYIK-------LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHK-TEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQ--DLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPP-SDPDMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRT 511
            MS  + + R FK+ GL I+A A   ++ VV RE        D +  +  II   K  RI+       R+    N+V    +  VVA+     +D++D + Q+ +AF  PRL FD +R    L   G  +R+++G A +K  M+ +R+ +++QR+ R D+F+P ++ +      +       ++P++SL+G +  R+LLGM+ Q EEGKY+LED   ++PL+ S A   T+G  TE+ VV++EG+   GV  V  +G P +E R DS++A+G Q  D+F +  +  + E++R+ E++   D MFV++SDV LD P V+EK+E + EG+    P P FVFMGNF+S P++ A +     ++ F+ L  +I KFP +A+  +FVF+PGP DPG    LPR P+P YFT +LR  +K+   A+NPCR+RFFT+E+VFFR++++ KM+R+ L  P  D +  ++ H  KT+L QGHL PLPLS  PI+W+ D AL LYP P   +  DR EQY     +C ++NPG F +  +FVVYRP   T
Sbjct:    1 MSERKRLTRIFKMHGLSIQASALDTLLDVVQREAEVGRNKADVNNVIFNIIDEIKDRRIQGGNGSGGRSSSVGNIVTSALLEDVVADFRRDAKDVSDEAVQLLDAFHMPRLDFDRMRKNFSLVPFGKEERTLYGEAVAKVDMFNQRYALIQQRILRQDIFQPKLVTNRLARSAQNNGGTHTITPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTAQVPLNFSEASLLTDGFVTENSVVLIEGEAIDGVLHVHNMGSPIVENRLDSIKAIGLQNTDIFNSIGSLSEYEKLREQELEHGEDGMFVVLSDVYLDSPAVIEKIERMLEGYSDFNPLPIFVFMGNFTSKPLSSASEGTKAMISYFEDLANVICKFPNVANEGRFVFIPGPNDPGITGVLPRGPIPNYFTAALRSKVKNVMLASNPCRMRFFTKEIVFFRDNLVSKMRRNCLIEPRQDSNGQLSSHAIKTVLDQGHLSPLPLSTSPIYWQHDHALRLYPFPDALICGDRVEQYYETYEECDAINPGPFSNGFNFVVYRPVGET 538          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A8K1CHQ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHQ1_PYTOL)

HSP 1 Score: 374 bits (959), Expect = 1.220e-120
Identity = 213/537 (39.66%), Postives = 326/537 (60.71%), Query Frame = 0
Query:    4 AQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRR-EYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPI-THAPDSVAQAVARF-DSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFP------------PSDPD-------MDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVEFSHVD 518
            A+ V RA KLQGL +  DA + +V  +  E   +  +  ++ A K  I+R+++ S+VV ++ + + +  L +  ++    S Q+ +AF  PRL ++   +  L E    R RS+H PAES+ ++ R+RF ++  RV R+ +F PP I+ S   +YI+LS ++SL+G   +R ++GML Q E  +Y+LEDL +R+ ++L+NA  T G+FT +CVV+VEG++   +  V  +GFPP E++ +S   LG  D  G  V+ QQ+E+++ LE     A F+++SDV LD PQVM+ L+ LF+G +   P   F+ MG+F S+P+   A  +  + +  + D L  LILK+P LA  +KFV VPGP DPG+    PR PLP+  T+ L   + +    TNPCR+R++TQ++V FRED+ +KM RHA+ P              D D       +DI++H  KT++ Q HLCP+PL A PI+W  D A+ L+PLP + +L D TEQY+   S     +PG F  D SFV+YRP+T T EFS V+
Sbjct:    3 AKQVLRACKLQGLSLHPDALRRLVDELTAEPTLE--LDNVVYALKNSIDRSKMTSSVVSLEALESALDTLLAVSEENQFESIQIFDAFTTPRLAYNSANS--LYELKADRHRSIHAPAESRLQLLRDRFQLIDLRVKRNKMFAPPAISVSNEVDYIELSKIESLLGVTGIRRVIGMLGQDERKRYYLEDLTSRIYIELNNATYTNGLFTLNCVVLVEGEVIDDLLHVHTMGFPPPESKAESKVILGGVDPLGVEVSAQQLEQIQALEASDHHATFIVLSDVHLDDPQVMQHLDLLFQGLESVLPS-LFILMGDFLSTPVGVGAGSNTLEDLKDYLDELGNLILKYPKLAEFSKFVLVPGPNDPGSSRAFPRHPLPSLCTRDLVRKVPNVICTTNPCRIRYYTQDLVIFREDLHQKMHRHAILPVLPDEVTEANGDAMDVDSGNTHAHVDISKHLVKTIIDQSHLCPMPLMAAPINWAFDSAMQLFPLPDVLILGDSTEQYQLGYSSVAVFHPGPFHVDFSFVLYRPSTNTTEFSRVE 534          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A1V9YX49_9STRA (DNA polymerase epsilon subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX49_9STRA)

HSP 1 Score: 372 bits (955), Expect = 3.460e-120
Identity = 211/528 (39.96%), Postives = 321/528 (60.80%), Query Frame = 0
Query:    1 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASS--RREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPD--SVAQAVARFDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFP------PSDPDMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVEFSHVD 518
            M+ A+ VFRAFKLQGL + ADA K ++R +D +      ++ +I A K  I+R++L ++VV  + + + +  L S   +    + Q+ +A  +P+L ++ +  T   E    R R +H   E +  ++RERF  V +RV RH  F  P++A++  +REY++L+ ++SL+G + ++ +LGML Q E    +LEDL  R+ ++        G++T + VVIVEG++   VF V  +G PP E R DS+  LG  D  G  V+ QQM ++R+LE +   A FVI+SDV LD PQVM++L+ LFEG+    P   FV MGNF+S+P+ +  D  S+A      D L  ++LK+P+L   +KFV VPGP DPGA   LPR PLP   T      +  A+ A+NPCR+R+FT+++V  R+D+  KM+R+ L P        D    ++    KT++ QGHLCPL LSA+PIHW  D +L L+PLP + VLAD+T+Q++   +   +++PG F  D SF++YRPAT   E S +D
Sbjct:    1 MAAAKQVFRAFKLQGLTLHADALKRLLREMDEQPSV--LLEDVIYAIKNSIDRSKLTNSVVTQEALESALDTLLSVSTENDYQAIQVFSALEQPKLRYESLSKTY--EVVADRGRRLHAAPEYRVNLFRERFAAVERRVRRHKTFSKPVMATTSLQREYLELTRIESLLGVSGVKRVLGMLGQDERNNIYLEDLTARIYINTDKTICAPGMYTLNSVVIVEGQVRDDVFHVESMGGPPPEYRADSIAILGGLDPLGVEVSAQQMTQIRELEAQDDLASFVILSDVHLDDPQVMKRLDRLFEGYAPFCPT-LFVLMGNFTSTPVGYGQDAISIADFKELLDDLAAILLKYPSLVEHSKFVLVPGPDDPGAASVLPRHPLPDMCTTDFLRKIPSATMASNPCRIRYFTKDIVILRDDLQAKMRRNCLMPLEAAADDEDRTTTVSRQLVKTVIDQGHLCPLSLSAQPIHWAYDGSLQLFPLPDVLVLADKTDQFQVGYAGVAAIHPGPFYVDYSFMLYRPATAVTELSRID 523          
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Match: A0A833SQQ2_PHYIN (DNA polymerase epsilon subunit n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQQ2_PHYIN)

HSP 1 Score: 371 bits (953), Expect = 9.100e-120
Identity = 213/532 (40.04%), Postives = 322/532 (60.53%), Query Frame = 0
Query:    7 VFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKARIERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIASSRR-EYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQDLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEGFQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVAR--FDSLCKLILKFPALASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFREDILKKMQRHALFPPSDPDM-----------------DITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDASFVVYRPATRTVEFSHVD 518
            V RA KLQGL + ADA + +   ++ E  A   ++ +I A K  I+R+++ S+VV ++ + + +  L +   +      Q+  AF  PRL+F+   N+  L  A T +R   GP E++ ++ R RF+ V  RV R+ LF PP  A +   EY++LS ++SL+G + +R ++GML Q E  +++LED  +R+ +DL+NA  T+G+FT +CVV+VEG++   V  V  +GFPP E +E SL  LG  D  G  V+ QQ E++R+LE     A F+++SDV LD P VM KL+ LF+G +  QP   F+ MG+F S+ I     S +    R   + L  LILK+P +A +++F+ VPGP DPG+    PR PLP   T+ L   + + + +TNPCR+R++TQ++V FR+D+ +KMQRHA+ PP+  +                  DI++H  KT++ Q HLCPLPL A PI+W+ D +L L+P P + +L D TEQY+   S     +PG F +D SFV YRP+T T EFS V+
Sbjct:    6 VLRACKLQGLSLHADALRRLTEELNNE--ASLQLEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNMHNNSYDLR-ADTHRRLHAGP-EARIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTIEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLTNAAYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKEASLEGLGGIDPLGVEVSAQQREQIRELEASDHHAAFIVLSDVHLDDPLVMSKLDELFQGLESVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEELGSLILKYPGIAENSRFILVPGPNDPGSSRAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPTPSEQGEAMDEDGETVHSVSQTDISKHLAKTVIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSIGVFHPGPFHADYSFVFYRPSTNTTEFSRVE 532          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1357.2883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD49_ECTSI0.000e+094.02DNA polymerase epsilon subunit n=1 Tax=Ectocarpus ... [more]
A0A835YQA3_9STRA3.660e-17951.92DNA polymerase epsilon subunit n=1 Tax=Tribonema m... [more]
A0A7S4I565_9STRA2.150e-14043.79DNA polymerase epsilon subunit n=1 Tax=Odontella a... [more]
A0A7S1GD26_9STRA2.610e-13044.42DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bic... [more]
B8C9U5_THAPS1.330e-12642.21DNA polymerase II subunit 2 (Fragment) n=1 Tax=Tha... [more]
A0A6V2A035_9STRA1.820e-12441.39DNA polymerase II subunit 2 n=1 Tax=Ditylum bright... [more]
A0A6V0YVC1_9STRA2.720e-12439.59DNA polymerase epsilon subunit n=1 Tax=Skeletonema... [more]
A0A8K1CHQ1_PYTOL1.220e-12039.66Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9YX49_9STRA3.460e-12039.96DNA polymerase epsilon subunit n=1 Tax=Achlya hypo... [more]
A0A833SQQ2_PHYIN9.100e-12040.04DNA polymerase epsilon subunit n=1 Tax=Phytophthor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016266DNA polymerase epsilon, subunit BPIRSFPIRSF000799DNA_pol_epsilon_2coord: 2..518
e-value: 7.2E-148
score: 491.0
IPR016266DNA polymerase epsilon, subunit BPANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 3..516
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 277..481
e-value: 3.4E-48
score: 163.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1357contigH-canaliculatus_F_contig1357:16569..27308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1357.2883.1mRNA_H-canaliculatus_F_contig1357.2883.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1357 16569..27308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1357.2883.1 ID=prot_H-canaliculatus_F_contig1357.2883.1|Name=mRNA_H-canaliculatus_F_contig1357.2883.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=519bp
MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEDADEAVQAIISATKAR
IERNELASNVVDVDTVSAVVAELTSREQDLTDSSTQMQNAFLRPRLYFDP
VRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPII
ASSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDL
SNAHKTEGIFTEHCVVIVEGKMAAGVFQVAMVGFPPIEAREDSLRALGRQ
DLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVSLDKPQVMEKLEALFEG
FQYAQPPPHFVFMGNFSSSPITHAPDSVAQAVARFDSLCKLILKFPALAS
SAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRF
FTQEMVFFREDILKKMQRHALFPPSDPDMDITEHCTKTLLHQGHLCPLPL
SARPIHWELDDALSLYPLPHLAVLADRTEQYRWMLSDCCSLNPGSFPSDA
SFVVYRPATRTVEFSHVD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR016266POLE2