mRNA_H-canaliculatus_F_contig13157.2597.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI) HSP 1 Score: 181 bits (460), Expect = 3.680e-50 Identity = 94/141 (66.67%), Postives = 114/141 (80.85%), Query Frame = 1
Query: 1 AVFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAMPTQTPLELRQSAGSDDDVPVFESVPATWRSFMRHVSVAEEPGPTQSTSGTTLTVN 423
++FE LSPYESESD+WLSRGGH+IVFLSMFD+LLLKVDVS ESD+SQA+F+GVLVAGH+L++L I+VEV G+CYA KKR V A ++ LR AGSDD VP FESVPA+W SFMR SV+EEPGPT+ +G + VN
Sbjct: 1221 SLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSCESDQSQAVFSGVLVAGHVLMILVIIVEVVGMCYASGKKRVVGAASSPESSPGLRPRAGSDD-VPAFESVPASWPSFMRQSSVSEEPGPTRRIAGI-MVVN 1359
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 179 bits (453), Expect = 3.120e-49 Identity = 89/139 (64.03%), Postives = 111/139 (79.86%), Query Frame = 1
Query: 4 VFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAMPTQTPLELRQSAGSDDDVPVFESVPATWRSFMRHVSVAEEPGPTQSTSGTTLTV 420
VFE +SPY SESD WLSRGGH+IVFLSMFD LLLKVDVS ES++SQ +FAGV VAGH+L++LAIVVEV G+C A KKR V+EA+P++ LR GSDD VPVFES PA+W++F+ SV+E+PGP +S SG +T+
Sbjct: 962 VFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICLASGKKRGVEEAVPSEGLPVLRPRGGSDD-VPVFESAPASWKTFVGQASVSEKPGPRRSASGAVVTM 1099
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI) HSP 1 Score: 167 bits (423), Expect = 3.570e-45 Identity = 88/134 (65.67%), Postives = 104/134 (77.61%), Query Frame = 1
Query: 4 VFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAMPTQTPLELRQSAGSDDDVPVFESVPATWRSFMRHVSVAEEPGPTQSTSG 405
+FE LSPYESESD+WLSRGGH+IVFLSMFD+LLLKVDVS ES+ SQAIF+ V VAGH+L++L IVVEV G+CYA KKR V A +++ LR AGSDD VP ESVPA+W SFMR SV+EE G Q+ G
Sbjct: 1547 LFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVEVVGICYASGKKRVVGAASSSESSPGLRPRAGSDD-VPALESVPASWASFMRQGSVSEEQGGPQAQEG 1679
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: A0A6H5L4F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F7_9PHAE) HSP 1 Score: 165 bits (417), Expect = 2.130e-44 Identity = 88/143 (61.54%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 1 AVFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAMPTQTPLELRQSAGSDDDVPVFESVPATWRSFMRHVSVAEEPGPTQSTSGTTLTVNRP 429
AVF+ LSPY S SD WLSRGGH+IVFLSMFD LLLKVDVS + D+SQA FAGVLVAGH+L++LAIVVEVA +CYA R+KR + ++ P GSDD VP ES PA WRSF+R SV+E+ G T+S SGT +T P
Sbjct: 843 AVFDVLSPYTSASDTWLSRGGHVIVFLSMFDFLLLKVDVSGDRDQSQAAFAGVLVAGHVLMILAIVVEVAALCYASRRKRVAEGEEASERPR-----VGSDD-VPALESAPAPWRSFLRLRSVSEKTGSTRSVSGTVVTTGGP 979
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.040e-43 Identity = 88/144 (61.11%), Postives = 107/144 (74.31%), Query Frame = 1
Query: 1 AVFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAMPTQTPLELRQSAGSDDDVPVFESVPATWRS-FMRHVSVAEEPGPTQSTSGTTLTVNRP 429
A+FE +SPY+S+SD+WLSRGGH+IVF SMFD+LL KVDVS E + SQA+FAGVLVAGH+L+VLAIVVEV G+CY R +R A T L R AGSDD V FESVPA+W S F R SV+E+PGP + +G +TV RP
Sbjct: 948 AIFEMVSPYKSDSDMWLSRGGHVIVFFSMFDLLLRKVDVSDEREESQAVFAGVLVAGHVLMVLAIVVEVVGICYGSRGERV---AKGTAV-LSERPRAGSDDGVTGFESVPASWTSSFRRQGSVSEKPGPNRIVAGEVVTVERP 1087
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: A0A6H5K0D5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D5_9PHAE) HSP 1 Score: 153 bits (387), Expect = 2.700e-43 Identity = 85/141 (60.28%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 4 VFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAMPTQTPLELRQSAGSDDDVPVFESVPATWRSFMRHVSVAEEPGPTQSTSGTTLTVNR 426
VFE LSPY SE D+ LSRG H+IV LSMFD+LLLKVDVS ES++SQ FA VLVAGH+L++LAI+VEV GVC A KR V A T+ L AGSDD V FES PA+W MR SV+EEPGPT+ +GT + V R
Sbjct: 156 VFEMLSPYTSEPDMCLSRGDHVIVPLSMFDLLLLKVDVSGESEQSQTAFAAVLVAGHVLMILAIIVEVVGVCCASGTKRVVGAAASTENVPGLTPRAGSDD-VLAFESAPASWPPSMRERSVSEEPGPTRRVAGTVIAVGR 295
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: A0A6H5LAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD4_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.850e-35 Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 1
Query: 4 VFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAMPTQTPLELRQSAGSDDDVPVFESVP 333
+FE LSPY SESD+WLSRGGH+IVFLS+FD++LLKVDVS ESD+SQA+F+GVL+AGH+L++L IVVEV G+CYA KR V A +++ LR GSDD P FESVP
Sbjct: 636 LFEILSPYGSESDMWLSRGGHVIVFLSIFDLVLLKVDVSGESDQSQAVFSGVLLAGHVLMILVIVVEVVGICYASGMKRVVGAASSSESSPGLRPRPGSDD--PAFESVP 743
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: A0A6H5JL43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL43_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.090e-30 Identity = 66/99 (66.67%), Postives = 78/99 (78.79%), Query Frame = 1
Query: 4 VFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAM-PTQTPLELRQSAG 297
VFE LSPYESESD+WLSRGGH+IVFLS FD+LLLKVDVS ESD+SQ +FAGVLVAGHML +LAI EV G+ YA KKR V + P +P E +++ G
Sbjct: 674 VFEILSPYESESDIWLSRGGHVIVFLSTFDLLLLKVDVSGESDQSQTMFAGVLVAGHMLPILAIFAEVVGIWYASGKKRVVRAGVSPEISPGEAKRTIG 772
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI) HSP 1 Score: 121 bits (303), Expect = 4.910e-29 Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 1
Query: 1 AVFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDEAMPTQTPLELRQSAGSDDDVPVFESVPAT 339
AVF+ LSPY SE D+WLSRGG ++VFLSMFD+LLLKVDVSHE +SQ +AGVLVAGH+L+ LAI EV G+CYA R+ R ++E + LR A S++ PVF PA+
Sbjct: 942 AVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAISAEVVGICYASRRNRVMEEDKAFLSFPGLRARATSNE-TPVFLRSPAS 1053
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 116 bits (290), Expect = 2.790e-27 Identity = 65/135 (48.15%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 4 VFEALSPYESESDVWLSRGGHMIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVCYAFRKKRAVDE-AMPTQT---PLELRQSA------GSDDDVPVFESVPATWRSFMRHVSVAEE 378
V+E L+PY S+SD+WLSRGGH+IVFLSMFD+LLLKVDVS E SQ +FAGV+VAGH L+ LA++VE GVCYA K + V E ++P++ P R + D++ E+ +W+SF+ + EE
Sbjct: 1061 VYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEAVGVCYASSKGQPVSEHSVPSRRTFGPAAQRSRSTRALETAEDEECLPAEAPLGSWKSFVGLDAALEE 1195 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13157.2597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13157.2597.1 >prot_H-canaliculatus_F_contig13157.2597.1 ID=prot_H-canaliculatus_F_contig13157.2597.1|Name=mRNA_H-canaliculatus_F_contig13157.2597.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=122bp MIVFLSMFDMLLLKVDVSHESDRSQAIFAGVLVAGHMLIVLAIVVEVAGVback to top mRNA from alignment at H-canaliculatus_F_contig13157:65..511+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13157.2597.1 ID=mRNA_H-canaliculatus_F_contig13157.2597.1|Name=mRNA_H-canaliculatus_F_contig13157.2597.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=447bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13157:65..511+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13157:65..511+ >mRNA_H-canaliculatus_F_contig13157.2597.1 ID=mRNA_H-canaliculatus_F_contig13157.2597.1|Name=mRNA_H-canaliculatus_F_contig13157.2597.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=732bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13157:65..511+ (Hapterophycus canaliculatus Oshoro5f female)back to top |