mRNA_H-canaliculatus_F_contig13064.2535.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: N9CSC5_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Acinetobacter towneri DSM 14962 = CIP 107472 TaxID=1120929 RepID=N9CSC5_9GAMM) HSP 1 Score: 113 bits (283), Expect = 9.480e-30 Identity = 65/103 (63.11%), Postives = 67/103 (65.05%), Query Frame = 3
Query: 36 FTPLVGVLFTFPSRYWFTIGQ*GVLSLRRWSSDLQTEFHVFRPT*YVPSC-FEYGAITRYGHASQHVLL--TLKARLVPVRSPLLGEYQLISFPPGT*MFQFP 335
FTPL GVLF FPSRYWFTIGQ GV SL WS +QT FHV RPT + C F YG IT Y SQ V L T L P RSPLL E QLISFP GT MF FP
Sbjct: 2 FTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTRFHVPRPTRHHCVCPFVYGNITLYVRTSQSVPLEHTQLNGLFPFRSPLLRESQLISFPKGTEMFHFP 104
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: A0A6G5ADV0_RHIMP (Uncharacterized protein (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5ADV0_RHIMP) HSP 1 Score: 108 bits (271), Expect = 2.330e-28 Identity = 62/109 (56.88%), Postives = 69/109 (63.30%), Query Frame = 3
Query: 15 AFGFRYCFTPLVGVLFTFPSRYWFTIGQ*GVLSLRRWSSDLQTEFHVFRPT*YVPSCFEYGAIT--RYGHASQHVLLTLKARLVPVRSPLLGEYQLISFPPGT*MFQFP 335
A FR CFTPLVGVLFTFPSRY FTIG+ GVL L WS +QT FHV RPT V C ++ + L LVPVRSPLL E +L+SFPPGT MFQFP
Sbjct: 1 ASDFRICFTPLVGVLFTFPSRYLFTIGRRGVLRLGGWSPHVQTGFHVSRPT-RVSCCLTSTGLSPAMADFPFRSTLFHKSTGLVPVRSPLLRESRLMSFPPGTEMFQFP 108
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: Q3BKI1_9PROT (Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKI1_9PROT) HSP 1 Score: 110 bits (274), Expect = 2.330e-27 Identity = 54/78 (69.23%), Postives = 59/78 (75.64%), Query Frame = 1
Query: 1 PTDCRRSVSGTVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQNFTCSALLNTSHHASNTGLSPAMAMLPNMF 234
PT CR SVSGTVSLP SGCFSPFPHGT SLSV++EYL E GPP+FRQ+FTC ALL + TGLSPAMA L F
Sbjct: 85 PTACRHSVSGTVSLPLSGCFSPFPHGTSSLSVTEEYLGLEDGPPMFRQDFTCPALLKADTRFTPTGLSPAMARLSRRF 162
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: A0A2S2PQL9_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PQL9_SCHGA) HSP 1 Score: 106 bits (265), Expect = 1.380e-26 Identity = 51/56 (91.07%), Postives = 52/56 (92.86%), Query Frame = 1
Query: 1 PTDCRRSVSGTVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQNFTCSALL 168
PT CRR VS TVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQ+FTC ALL
Sbjct: 25 PTACRRPVSETVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQDFTCPALL 80
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: H6SIC1_PARPM (Uncharacterized protein (Fragment) n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIC1_PARPM) HSP 1 Score: 101 bits (252), Expect = 8.800e-26 Identity = 48/56 (85.71%), Postives = 49/56 (87.50%), Query Frame = 1
Query: 1 PTDCRRSVSGTVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQNFTCSALL 168
PT CR VSGTVSLPSSGCFSPFPHGTGSLSV KEYLA EGGPP+FRQ FTC ALL
Sbjct: 17 PTACRHPVSGTVSLPSSGCFSPFPHGTGSLSVVKEYLALEGGPPMFRQGFTCPALL 72
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: A0A6A5L4G5_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L4G5_LUPAL) HSP 1 Score: 109 bits (273), Expect = 1.330e-25 Identity = 54/78 (69.23%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 1 PTDCRRSVSGTVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQNFTCSALLNTSHHASNTGLSPAMAMLPNMF 234
PT CR VSGTVSLP SGCFSPFPHGTG+LSV++EYL EGGPP+FRQ FTC ALL TGLSPAMA L F
Sbjct: 43 PTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDCFRFIRTGLSPAMARLSRRF 120
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: A0A6A5L866_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L866_LUPAL) HSP 1 Score: 109 bits (273), Expect = 1.420e-25 Identity = 54/78 (69.23%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 1 PTDCRRSVSGTVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQNFTCSALLNTSHHASNTGLSPAMAMLPNMF 234
PT CR VSGTVSLP SGCFSPFPHGTG+LSV++EYL EGGPP+FRQ FTC ALL TGLSPAMA L F
Sbjct: 43 PTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDRFRFIRTGLSPAMARLSRRF 120
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: A0A6A5L6S4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L6S4_LUPAL) HSP 1 Score: 109 bits (273), Expect = 1.430e-25 Identity = 54/78 (69.23%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 1 PTDCRRSVSGTVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQNFTCSALLNTSHHASNTGLSPAMAMLPNMF 234
PT CR VSGTVSLP SGCFSPFPHGTG+LSV++EYL EGGPP+FRQ FTC ALL TGLSPAMA L F
Sbjct: 43 PTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALLVDRFRFIRTGLSPAMARLSRRF 120
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: D4BE78_9ENTR (Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 TaxID=500640 RepID=D4BE78_9ENTR) HSP 1 Score: 99.8 bits (247), Expect = 5.770e-25 Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 3
Query: 21 GFRYCFTPLVGVLFTFPSRYWFTIGQ*GVLSLRRWSSDLQTEFHVFRPT*----YVPSCFE--YGAITRYGHASQHVLLTLKARLVPVRSPLLGEYQLISFPPGT 317
GFR+ FTPL GVLF FPSRYWFTIGQ GV SL WS +QT +HV RPT +V C + + + S + + L+PVRSPLLGE +LISFP GT
Sbjct: 5 GFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTLRAHNHVHFCVRGYHPVPSAFPDRSTNTHADSGSGLLPVRSPLLGESRLISFPRGT 109
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Match: UPI001A08AA19 (Uncharacterized protein n=1 Tax=Pseudorhizobium halotolerans TaxID=1233081 RepID=UPI001A08AA19) HSP 1 Score: 103 bits (256), Expect = 7.730e-25 Identity = 50/78 (64.10%), Postives = 59/78 (75.64%), Query Frame = 1
Query: 1 PTDCRRSVSGTVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQNFTCSALLNTSHHASNTGLSPAMAMLPNMF 234
PT CR VSG++SLPSSGCFSPFPHGT SLSV EYL E G P+FRQ+FTC ALL + ++ TGLSP +A L N+F
Sbjct: 69 PTVCRHPVSGSISLPSSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNQCSTPTGLSPTIAKLSNLF 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13064.2535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13064.2535.1 >prot_H-canaliculatus_F_contig13064.2535.1 ID=prot_H-canaliculatus_F_contig13064.2535.1|Name=mRNA_H-canaliculatus_F_contig13064.2535.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=94bp PTDCRRSVSGTVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQNFback to top mRNA from alignment at H-canaliculatus_F_contig13064:1521..1860- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13064.2535.1 ID=mRNA_H-canaliculatus_F_contig13064.2535.1|Name=mRNA_H-canaliculatus_F_contig13064.2535.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=340bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13064:1521..1860- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13064:1521..1860- >mRNA_H-canaliculatus_F_contig13064.2535.1 ID=mRNA_H-canaliculatus_F_contig13064.2535.1|Name=mRNA_H-canaliculatus_F_contig13064.2535.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=564bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13064:1521..1860- (Hapterophycus canaliculatus Oshoro5f female)back to top |