mRNA_H-canaliculatus_F_contig1294.2447.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: D7FTU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU0_ECTSI) HSP 1 Score: 184 bits (468), Expect = 4.270e-52 Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = 1
Query: 331 RRSNPRIRPAADLWGPYKRERYYFEVVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFA 666
RRSN RI PAADLWGPY+ ERYY+EV+ECFRR+ LTG AVF+ PDSSAQIAIVLLLA FMV+SE+LSPFARPVEMWLYRAGHY+VFASMYLALLLRVDVSDE +SQ VFA
Sbjct: 31 RRSNSRITPAADLWGPYRPERYYYEVIECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDEGDQSQGVFA 142
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 181 bits (459), Expect = 1.800e-47 Identity = 89/115 (77.39%), Postives = 101/115 (87.83%), Query Frame = 1
Query: 325 DERRSNPRIRPAADLWGPYKRERYYFEVVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFAG 669
++R S +RPAADLW PYK YY+EVVECFRR+ LTG AVF+ PDSSAQ+AIVLLLA FMV+SE+LSPFARPVEMWLYRAGHY+VFASMYLALLLRVDVSDER +SQEVF+G
Sbjct: 900 EDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSG 1014
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 179 bits (455), Expect = 6.110e-47 Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 1
Query: 325 DERRSNPRIRPAADLWGPYKRERYYFEVVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFAG 669
++R +RPAADLW PYK YY+EVVECFRR+ LTG AVF+ PDSSAQ+AIVLLLA FMV+SE+LSPFARPVEMWLYRAGHY+VFASMYLALLLRVDVSDER +SQEVF+G
Sbjct: 881 EDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSG 995
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 173 bits (439), Expect = 8.150e-45 Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 1
Query: 349 IRPAADLWGPYKRERYYFEVVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFAG 669
++PAADLW PYK YY+EVVECFRR+ LTG AVF+ PDSSAQ+AIVLLLA FMV+SE LSPFARPVEMWLYR GHY+VFASMYLALLLRVDVSDER +SQEVF+G
Sbjct: 902 LKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSG 1008
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: A0A6H5L0E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E1_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.510e-37 Identity = 87/155 (56.13%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 322 GDERRSNPRIRPAADLWGPYKRERYYFE---------------------------------------VVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFAG 669
G ERR+ ++PAADLW PYK YY+E VVECFRR+ LTG AVF+ PDSSAQ+AIVLLLA FMV+SE LSPFARP+EMWLYR GHY+VFASMYLALLLRVDVSDE +SQEVF+G
Sbjct: 101 GRERRA--ALKPAADLWEPYKPSTYYYEAAQPPPYLDKLPRRLSSQCLPCPPASADMPPSATPTLEKVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPIEMWLYRTGHYVVFASMYLALLLRVDVSDENNQSQEVFSG 253
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 136 bits (342), Expect = 4.150e-33 Identity = 63/106 (59.43%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 349 IRPAADLWGPYKRERYYFEVVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFA 666
++P DLW PYK RYYFEVVEC RR+ LTGLAVF+ P S+AQ+A+ ++ A FF+ +S+VLSPFA P++ WLYR+G +++F SM+L LLL+VD SDE ++SQE+FA
Sbjct: 260 LQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFA 365
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.380e-31 Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 1
Query: 349 IRPAADLWGPYKRERYYFEVVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFA 666
++P DLW YK RYYFEV+EC RR+ LTGLA FL PDS+AQ+AI ++LA FM +S+VLSPFA P + WLYR G +I+F SMYLALLL+VD SDE ++SQ FA
Sbjct: 936 LQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFA 1041
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: D7G021_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G021_ECTSI) HSP 1 Score: 129 bits (325), Expect = 2.110e-30 Identity = 63/112 (56.25%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 331 RRSNPRIRPAADLWGPYKRERYYFEVVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFA 666
R N + PA LW YK E +YF ++EC RR+ LTGL VF+ P+S+AQ+AI+LLLA F+VLSEVL PF +P+E WLY +G ++FASMY ALLL+VDVS+E ++SQ F+
Sbjct: 169 RAENADLEPAKALWESYKGETWYFIIIECVRRIALTGLGVFINPNSAAQVAILLLLAFGFLVLSEVLDPFEKPIETWLYLSGSCVIFASMYAALLLKVDVSNENSESQTAFS 280
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 128 bits (322), Expect = 2.980e-30 Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 1
Query: 349 IRPAADLWGPYKRERYYFEVVECFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFA 666
+RP DLW PYK RY++E+VEC RR+ LTGLAVFL P ++AQ+AI + A +V+ EVL+PF P++ WLYR+G +VF SMYLALLL+VD SDE ++SQ+VFA
Sbjct: 235 LRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFA 340
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Match: A0A6H5L4E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E3_9PHAE) HSP 1 Score: 124 bits (311), Expect = 5.820e-30 Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 349 IRPAADLWGPYKRERYYFEVVE--CFRRVTLTGLAVFLTPDSSAQIAIVLLLATFFMVLSEVLSPFARPVEMWLYRAGHYIVFASMYLALLLRVDVSDERAKSQEVFA 666
++ DLW PYK RYYFEVVE C RR+ LTGLA FL P S+AQ+AI ++LA FM +S+VL PF P WLYR G +I+F SMYLALLL+VDVSDE +SQ FA
Sbjct: 87 LQSMRDLWAPYKPHRYYFEVVEVECGRRIVLTGLAAFLLPKSAAQVAIEVVLAAIFMAVSDVLPPFVDPFGAWLYRIGGWIIFFSMYLALLLKVDVSDEDNQSQAAFA 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1294.2447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1294.2447.1 >prot_H-canaliculatus_F_contig1294.2447.1 ID=prot_H-canaliculatus_F_contig1294.2447.1|Name=mRNA_H-canaliculatus_F_contig1294.2447.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=315bp AATATTTEAGGRLFGSRRDCHQEPAHICGPAAGVRGLRDGVPHRLRRFCVback to top mRNA from alignment at H-canaliculatus_F_contig1294:11491..15120+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1294.2447.1 ID=mRNA_H-canaliculatus_F_contig1294.2447.1|Name=mRNA_H-canaliculatus_F_contig1294.2447.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3630bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1294:11491..15120+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1294:11491..15120+ >mRNA_H-canaliculatus_F_contig1294.2447.1 ID=mRNA_H-canaliculatus_F_contig1294.2447.1|Name=mRNA_H-canaliculatus_F_contig1294.2447.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1890bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1294:11491..15120+ (Hapterophycus canaliculatus Oshoro5f female)back to top |