mRNA_H-canaliculatus_F_contig12479.2094.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: A0A6H5L6N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N5_9PHAE) HSP 1 Score: 319 bits (818), Expect = 8.520e-107 Identity = 175/239 (73.22%), Postives = 194/239 (81.17%), Query Frame = 1
Query: 1 KTLATSDLRYSLEAVGVRASSMFERSELIDAAMEKGIAKLADGSIVLDESQAGRPSPPPPSGGRGVVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQ-------GALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVIKPEDVEYTTAKPLNEQNNGRDDDLLDDFDMRLNNSVE 696
K+L+T+DLR +LEAVGVRA SMFERSELID AM GIAKL +G+IVL E + R S GGRGVVIPEPL E +PFSVAA WKK AAGVL AVNLGGALYLQ LLSGPAF GVTLPGYYGFVQ GALPFLLTYAVALN IPA+R+V+NKRENAKI+ RNFLRRKWA+AGRSG + + RKL+AAK MTTDMKVIKPEDVEYTTAK L +Q +DDDLLDDFD RL +S E
Sbjct: 78 KSLSTADLRVALEAVGVRAMSMFERSELIDEAMAAGIAKLDNGNIVL-EPRTSRGSSSSSGGGRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLQQLLSGPAFAGVTLPGYYGFVQASLLLLLGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGDAVISRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDARLRSSKE 315
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: D8LHB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB2_ECTSI) HSP 1 Score: 327 bits (837), Expect = 1.630e-106 Identity = 175/233 (75.11%), Postives = 196/233 (84.12%), Query Frame = 1
Query: 1 KTLATSDLRYSLEAVGVRASSMFERSELIDAAMEKGIAKLADGSIVLDESQAGRPSPPPPSGGRGVVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVIKPEDVEYTTAKPLNEQNNGRDDDLLDDFDMRLNNSVEK 699
K+L+T+DLR +LEAVGVRA SMFERSELIDAAM GIAKL +G+IVL E + R S GGRGVVIPEPL E +PFSVAA WKK AAGVL AVNLGGALYL+ LLSGPAF GVTLPGYYGFVQGALPFLLTYAVALN IPA+R+V+NKRENAKI+ RNFLRRKWA+AGRSG + V RKL+AAK MTTDMKVIKPEDVEYTTAK L +Q +DDDLLDDFD RL +S ++
Sbjct: 319 KSLSTADLRVALEAVGVRAMSMFERSELIDAAMAAGIAKLDNGNIVL-EPRTSRGSSSSSGGGRGVVIPEPLMEETKPFSVAAGWKKFAAGVLGAVNLGGALYLRQLLSGPAFAGVTLPGYYGFVQGALPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGGAVVSRKLKAAKTMTTDMKVIKPEDVEYTTAKTLADQGINQDDDLLDDFDARLKSSKKE 550
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: A0A7S2JVL0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVL0_9STRA) HSP 1 Score: 142 bits (359), Expect = 7.630e-36 Identity = 91/224 (40.62%), Postives = 122/224 (54.46%), Query Frame = 1
Query: 10 ATSDLRYSLEAVGVRASSMFERSELIDAAMEKGIAKLADGSIVLDESQAGRPSPPPPSGGRGVVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVIKPEDVEYTTAKPLNEQNNGRDDDLLDDFDMRL 681
+T D+ LE+ GV+ E+S+LID A D SIV EE E FSVA +K AG L A+NLGGALYL N+LS PA GVTLPGYYG VQ A P LL YA+ N IPA R+ ++N +I++RN RR+W A R+ + RKL+AAK + T ++ + EDV Y T + +++++ R+ D L DFD L
Sbjct: 369 STRDIINFLESQGVQTRGALEKSDLIDVLGSLEDAVGGDISIV--------------------------EEQEYKFSVAGDTQKFFAGALGAINLGGALYLGNMLSSPALAGVTLPGYYGLVQSAFPLLLGYAILYNIIPAARFAWIGKQNEEIRQRNQSRRQWLTAIRASRGRIARKLKAAKGLGTKLRRVDTEDVIYDTKESISDEDMRRETDALRDFDKLL 566
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: A0A836C8Z4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z4_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.860e-34 Identity = 77/162 (47.53%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 196 VVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVIKPEDVEYTTAKPLNEQNNGRDDDLLDDFDMRL 681
V +P L+E PFSVA+ K AA L AVNLGGALYL++LL GV GY VQGA+P LL YAVA N IP +RW+ NK +NA+I++RN R W+ + +RK+ AA+K++T++KV+ D+ YTTAK L EQ DDFD RL
Sbjct: 402 VDVPPTLQEEPIPFSVASPGNKFAAAALGAVNLGGALYLRSLLGSAVAAGVQFGGYAAAVQGAMPLLLGYAVAFNVIPLVRWLRNKAKNAEIEQRNDARMAWSRLIAAATPNNKRKMMAARKLSTELKVLGQGDIAYTTAKDLAEQQQELAGSAFDDFDRRL 563
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: A0A7R9ZEQ9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZEQ9_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.260e-34 Identity = 79/170 (46.47%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 181 SGGRGVVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVI--KPEDVEYTTAKPLNEQNNGRDDDLLDDFDMRLN 684
S G G +P++E E F+ + V +GVL A+NLGGALYL +LS PA GV LP Y+G VQ P LL YA++ NAIPA+R++ NK NA I+ERN +RRKWA +S V+RKLRAA+ + TDMK + K + V T +++ R+ D L DFD LN
Sbjct: 223 SDGGGRDSSQPIQEEELTFNRSGTGWNVLSGVLGAINLGGALYLGQILSSPALYGVQLPSYFGLVQACYPLLLLYALSFNAIPAVRYLSNKSANAAIRERNAVRRKWAVVLKSMGKRVRRKLRAARTLRTDMKRVGGKTDIVYDTKTDDVSKVTKKRESDALRDFDELLN 392
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: A0A7S2EHB7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHB7_TRICV) HSP 1 Score: 125 bits (314), Expect = 5.210e-32 Identity = 88/232 (37.93%), Postives = 115/232 (49.57%), Query Frame = 1
Query: 10 ATSDLRYSLEAVGVRASSMFERSELIDAAMEKGIAKLADGSIVLDESQAGRPSPPPPSGGRGVVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVIKP--EDVEYTTAKP-LNEQNNGRDDDLLDDFDMRLNNSVE 696
+T D+ L GV ER +LI+ L D S+ + G EP++E E F+ + + +G L A+NLGGALYL +LS PA VGV LP YYG VQ A P LL YAV N IP +R N R N I++RN RRKW+ R+ VQRKL+AA+ M T ++ + +DV Y T K E R+ D L +FD LN E
Sbjct: 6 STGDIVQVLNYRGVSTKGALERRDLIN---------LLDKSLTVS----------------GRDPSEPIQEEELEFNRSGTGWNILSGALGAINLGGALYLGQILSSPALVGVRLPSYYGVVQSAFPLLLAYAVLFNVIPLVRNAYNGRVNEGIRQRNDARRKWSTVLRAAGRNVQRKLKAARVMRTGLRRVGTGGDDVVYDTKKDSAKELEKRREKDALKEFDRLLNQDDE 212
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: A0A7S1ZEU5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZEU5_TRICV) HSP 1 Score: 125 bits (314), Expect = 1.540e-30 Identity = 88/232 (37.93%), Postives = 115/232 (49.57%), Query Frame = 1
Query: 10 ATSDLRYSLEAVGVRASSMFERSELIDAAMEKGIAKLADGSIVLDESQAGRPSPPPPSGGRGVVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVIKP--EDVEYTTAKP-LNEQNNGRDDDLLDDFDMRLNNSVE 696
+T D+ L GV ER +LI+ L D S+ + G EP++E E F+ + + +G L A+NLGGALYL +LS PA VGV LP YYG VQ A P LL YAV N IP +R N R N I++RN RRKW+ R+ VQRKL+AA+ M T ++ + +DV Y T K E R+ D L +FD LN E
Sbjct: 161 STGDIVQVLNYRGVSTKGALERRDLIN---------LLDKSLTVS----------------GRDPSEPIQEEELEFNRSGTGWNILSGALGAINLGGALYLGQILSSPALVGVRLPSYYGVVQSAFPLLLAYAVLFNVIPLVRNAYNGRVNEGIRQRNDARRKWSTVLRAAGRNVQRKLKAARVMRTGLRRVGTGGDDVVYDTKKDSAKELEKRREKDALKEFDRLLNQDDE 367
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: A0A1Z5KBK3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBK3_FISSO) HSP 1 Score: 122 bits (306), Expect = 2.310e-28 Identity = 80/186 (43.01%), Postives = 103/186 (55.38%), Query Frame = 1
Query: 172 PPPSGGRGVVIPEP--------LEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVI--KPEDVEYTTAKPLNEQNNGRDDDLLDDFDMRLNNSVEK 699
PPPS ++ + L E FSVA K AG L VNLGGALYL NLL A GV LP Y G VQ P LL YAV N IP +R V N++ENAKI++RN +RRKW DA ++ ++ RKL+AA KM T +K + P+++ + T KP+ E + D L +FD L K
Sbjct: 430 PPPSDSEKALLEDAAADSQTDVLTERRLKFSVATDVNKFLAGGLGVVNLGGALYLGNLLGQYALYGVRLPSYMGVVQSFYPLLLLYAVLFNVIPLVRNVYNQQENAKIEKRNGVRRKWRDALKN--NSFTRKLKAAAKMGTRLKQLGANPDEIVFDTRKPIEEIKKRKIDLELKEFDKLLQEDESK 613
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: L1IB44_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IB44_GUITC) HSP 1 Score: 120 bits (302), Expect = 6.080e-28 Identity = 79/207 (38.16%), Postives = 112/207 (54.11%), Query Frame = 1
Query: 19 DLRYSLEAVGVRASSMFERSELIDAAMEKGIAK--LADGSIVLDESQAGRPSPPPPSGGRGVVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVIKPEDVEYTTAKPLNEQ 633
DL+ S A + EL A +GI+ + + +L +A R + S G + L+E FS+A +++A G L AVNL GALYL NL + P VG L G GFV+ P LL Y VA A+PA R++ + +N KI++RN LR WA A R G ++RKL A+K + +K+IK +D+EYTT K + EQ
Sbjct: 332 DLQLSAAAANDQGWEKLSLQELTKLAKSEGISTRGVYEKDDLLAVIRAARETRSVKSNQEGDRVATYLDEKPFQFSLATSGQQLAVGALAAVNLFGALYLGNLFASPYLVGRELIGLLGFVKAIYPLLLAYGVAFVAVPAARYLKLQADNRKIEKRNRLRALWAFALRKGGRNLERKLTEARKRSQGVKLIKEQDIEYTTGKSIEEQ 538
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Match: A0A7S4HX01_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HX01_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.300e-26 Identity = 88/215 (40.93%), Postives = 116/215 (53.95%), Query Frame = 1
Query: 46 GVRASSMFERSELIDAAMEKGIAKLADGSIVLDESQAGRPSPPPPSGGRGVVIPEPLEEAERPFSVAAQWKKVAAGVLCAVNLGGALYLQNLLSGPAFVGVTLPGYYGFVQGALPFLLTYAVALNAIPAIRWVVNKRENAKIQERNFLRRKWADAGRSGASAVQRKLRAAKKMTTDMKVIKP-EDVEYTT-AKPLNEQNNGRDDDLLDDFDMRLN 684
GV A E+ +LI KL D S+ S +GR PS EP++E E F+ + V +GVL AVNLGGALYL +L+ PA GV LP Y+G VQ P LL YA+A N IPAIR+ K +NA I+ERN L+R W+ RS V+RKL AA+ M + MK + +D+ + T ++ R+ D L DFD LN
Sbjct: 409 GVNARGALEKKDLI---------KLLDQSL----SMSGRD----PS--------EPIQEEEFDFNRSGTGWNVLSGVLGAVNLGGALYLGQILASPALNGVRLPSYFGVVQSIYPLLLIYALAFNIIPAIRYFNIKGKNAAIRERNALKRNWSVVLRSMGKRVRRKLDAAQNMRSKMKRLGAGKDIVFDTRVDDASKVTKKRESDALRDFDKLLN 598 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12479.2094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12479.2094.1 >prot_H-canaliculatus_F_contig12479.2094.1 ID=prot_H-canaliculatus_F_contig12479.2094.1|Name=mRNA_H-canaliculatus_F_contig12479.2094.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=234bp KTLATSDLRYSLEAVGVRASSMFERSELIDAAMEKGIAKLADGSIVLDESback to top mRNA from alignment at H-canaliculatus_F_contig12479:137..3218+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12479.2094.1 ID=mRNA_H-canaliculatus_F_contig12479.2094.1|Name=mRNA_H-canaliculatus_F_contig12479.2094.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3082bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12479:137..3218+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12479:137..3218+ >mRNA_H-canaliculatus_F_contig12479.2094.1 ID=mRNA_H-canaliculatus_F_contig12479.2094.1|Name=mRNA_H-canaliculatus_F_contig12479.2094.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1404bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12479:137..3218+ (Hapterophycus canaliculatus Oshoro5f female)back to top |