mRNA_H-canaliculatus_F_contig12451.2082.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: D7FJU8_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU8_ECTSI) HSP 1 Score: 471 bits (1213), Expect = 1.780e-153 Identity = 225/288 (78.12%), Postives = 257/288 (89.24%), Query Frame = 1
Query: 7 QLKVMSLNSSEDKRGDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSFPGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGVHDDYMGEGRRGRFFYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSEGSTFLRLANDRGWTYARSPTDGGVLFEDLAGGVSEDTEEYSFPSGASGMVPILYGPGLRTQATGATIRPGEHARAAERFTPVDNTKVVFVKLADERGWIPVRTDVRGPPTVLHGW 870
+LKVM+LN+SEDKR K RRAP W QYYFRL++ +LTKSPPRRSSFPGN+ ++E+M+LTS TITSYTNTKNCFCVR+ ++SWFLLARSLDDMKRWM AINLRARH+FQREHGVHDDYMG+GRRGRFFYRMVEGSVPQWILTHPM+KAPRTG+GLFPGEV+EVTQVLSSE TFLRLANDRGWT+ARSP DG VLFEDLAGGV+EDTEEY+FP GASGMVPIL+GPGLRTQATG +RPGE RA+ERFTP+DN+ VVFVKL D RGW+P+++ GP T+L GW
Sbjct: 1059 ELKVMNLNTSEDKR---EKPTRRAPTWNQYYFRLKEETLTKSPPRRSSFPGNANQQAEDMKLTSATITSYTNTKNCFCVRTDDVSWFLLARSLDDMKRWMTAINLRARHIFQREHGVHDDYMGQGRRGRFFYRMVEGSVPQWILTHPMTKAPRTGDGLFPGEVVEVTQVLSSEDVTFLRLANDRGWTFARSPADGSVLFEDLAGGVAEDTEEYTFPPGASGMVPILHGPGLRTQATGVMVRPGERVRASERFTPLDNSSVVFVKLQDGRGWMPLKSQHGGPSTILQGW 1343
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: A0A6H5LIB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIB2_9PHAE) HSP 1 Score: 464 bits (1195), Expect = 1.550e-146 Identity = 223/288 (77.43%), Postives = 256/288 (88.89%), Query Frame = 1
Query: 7 QLKVMSLNSSEDKRGDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSFPGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGVHDDYMGEGRRGRFFYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSEGSTFLRLANDRGWTYARSPTDGGVLFEDLAGGVSEDTEEYSFPSGASGMVPILYGPGLRTQATGATIRPGEHARAAERFTPVDNTKVVFVKLADERGWIPVRTDVRGPPTVLHGW 870
+LKVM+LN+SEDKR K RRAPKW QY+FRLR+ +LTKS PRR S PGN+ +SE+M+LTS TITSYTNTKNCFCVR+ +SWFLLARSLDDMKRWM+AINLRARH+FQREHGVHDDY G+GRRGRFFYRMVEGSVPQWILTHPM+KAPRTG+GLFPGEV+EVTQVLSSE TFLRLANDRGWT+ARSP DG VLFEDLAGGV+EDTEEY+FP GASGMVPIL+GPGL+TQATG +RPGE RA+ERFTP+DN+KVVFVKL D RGW+P++++ GP T+L GW
Sbjct: 2314 ELKVMNLNTSEDKR---EKPTRRAPKWNQYFFRLREETLTKSLPRRPSSPGNADQQSEDMKLTSATITSYTNTKNCFCVRTDEVSWFLLARSLDDMKRWMSAINLRARHIFQREHGVHDDYAGQGRRGRFFYRMVEGSVPQWILTHPMTKAPRTGDGLFPGEVVEVTQVLSSEDVTFLRLANDRGWTFARSPADGSVLFEDLAGGVAEDTEEYTFPPGASGMVPILHGPGLKTQATGVFVRPGERVRASERFTPLDNSKVVFVKLQDGRGWMPLKSEHGGPSTILQGW 2598
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI) HSP 1 Score: 268 bits (684), Expect = 5.140e-78 Identity = 134/262 (51.15%), Postives = 175/262 (66.79%), Query Frame = 1
Query: 49 GDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSFPGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGV-HDDYMGEGRRGRFFYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSEGSTFLRLANDRGWTYARSPTDGGVLFEDLAGGVSEDTEEYSFPSGASGMVPILYGPGLRTQATGATIRPGEHARAAERFTPVDNTKVVFVKLADERGWIPVR 831
G L K + +W YFRL D LT + S G + +++ M LT+++ITSYTNTKNCFCVR+G WFLL + + +WM AIN + LF + + V D+Y +G GRFFYRMV+ ++PQWI T+P APRTG+GLFPGEVIEV Q L+++ + FLR+ NDRGWTYA++P DG LFE++ G V DT Y FP A +P+L+GPGL +Q TG + PGE A A ERFTP D + VVF+KL D RGW+PVR
Sbjct: 1153 GHLMKQSKYFSRWKPRYFRLEDGYLTYYD--KKSLVGTN--KNKGMELTAHSITSYTNTKNCFCVRTGEAVWFLLGKDELALNKWMTAINAQIHGLFIKLYNVPEDNYWSQGTNGRFFYRMVDDALPQWIRTYPEQAAPRTGDGLFPGEVIEVAQTLTNKETEFLRIGNDRGWTYAKNPADGSTLFEEIDGEVVPDTRNYGFPPSAKDPIPLLFGPGLESQQTGEALIPGERAEAMERFTPGDGSGVVFIKLKDGRGWVPVR 1410
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI) HSP 1 Score: 221 bits (564), Expect = 7.250e-62 Identity = 116/260 (44.62%), Postives = 156/260 (60.00%), Query Frame = 1
Query: 85 WAQYYFRLRDNSLTKSPPRRSSFPGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGV-HDDYMGEGRRGRFFYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSEGSTFLRLANDRGWTYARSPTDGGVLFEDLAGGVSEDTEEYSFPSGASGMVPILYGPGLRTQATGATIRPGEHARAAERFTPVDNTKVVFVKLADERGWIPVRTDVRGPPTVL 861
W YFRL D+ LT + S G +++ M L + SYTN NCF VR+G +W LLA+ D M++W+ AIN LF + H V D+Y +G +G+FFYRMV PQWI + P +APRTGEGLFPGEV+E+ QVLS+ +LR+ANDRGWT A +P DG VLFE+ G +ED +Y + VPIL+GP + +Q TG + PG+ A A RF P D + F+KLA ++GW+P+ P L
Sbjct: 1210 WKSRYFRLEDDILTFYDTK--SLVG--TRKNKRMELQPDSTASYTNVPNCFSVRTGEENWILLAKDEDSMEKWITAINAVIHGLFIKRHNVPEDNYDSQGLKGQFFYRMVPNVQPQWIRSFPEEEAPRTGEGLFPGEVVEIVQVLSNNNKVYLRIANDRGWTVAANPEDGSVLFEESNGDFTEDPMDYCT---SKNEVPILFGPSMESQMTGDALAPGQIAEATGRFVPADEGGLAFIKLAGDKGWVPMNPSFGVVPAGL 1462
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI) HSP 1 Score: 210 bits (534), Expect = 7.520e-58 Identity = 113/263 (42.97%), Postives = 155/263 (58.94%), Query Frame = 1
Query: 49 GDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSFPGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGVH-DDYMGEGRRGRFFYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLS-SEGSTFLRLANDRGWTYARSPTDGGVLFEDLAGGVSEDTEEYSFPSGASGMVPILYGPGLRTQATGATIRPGEHARAAERFTPVD-NTKVVFVKLADERGWIPV 828
G L K +R +W YYF+L D LT + S G + + + L ++ T++TNTK CFCVR+G +WFL+A+ D M +WM AIN + LF + D+Y G+G +GRFFY M E QWI THP APRTGEG+FP EV+EV Q+L E +LRLA++RGWT R DG E +AG + EDT Y P +L GP ++ TG + PG+ +A E+FTP ++ VVF+KLA+ RGW+P+
Sbjct: 1206 GHLMKQKRFTARWQTYYFKLDDGFLTHYD--KKSLVG--TRKRKTLELKPHSTTAFTNTKCCFCVRTGQNAWFLIAQDHDQMTQWMTAINAQVYSLFLKNFTPPADNYWGQGTKGRFFYGMPENGASQWIYTHPEEGAPRTGEGVFPMEVVEVVQLLPVGEDHLWLRLADERGWTCGRHSKDGEPCLEQVAGDIVEDTRVYELPRNQEQGTHVLCGPATASEVTGEVLDPGDRVQAVEKFTPAGADSGVVFIKLAEGRGWVPL 1464
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI) HSP 1 Score: 188 bits (477), Expect = 3.120e-50 Identity = 112/269 (41.64%), Postives = 152/269 (56.51%), Query Frame = 1
Query: 43 KRGDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSFPGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGVH-DDYMGEGRRGRFFYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSEGSTFLRLANDRGWTYARS--PTDGGVLFEDLAGGVSEDTEEYSFPSGASGMVPILYGPGLRTQATGATIRPGEHARAAERFTPVDNTKV----VFVKLADERGWIPV 828
K G L + +W YF L DN S + S G ++ E++ S +T TN N F VR+G W LLARS +MK WM AI + LF RE+ V DDY +G G+ FY+M G PQWI T P+ +AP TG+GLF GE+IEVTQVL +EG FLR+ANDRGW A+ DG LF ++G ++ +T E++ P A+ +L+GP L +Q TGAT+ PG+ R +R+T + FVKL GW+P+
Sbjct: 1128 KEGYLMSQSKMMKRWTPRYFVL-DNGFL-SHYEKISLVGTKKHKTMELKADS--VTRPTNQINTFGVRTGTTEWLLLARSKKEMKAWMGAITDQIHALFIREYNVPGDDYQSQGTWGQCFYKMAAGVRPQWIRTFPVPQAPHTGDGLFEGEIIEVTQVLENEGVKFLRMANDRGWASAQDIEAGDGTALFTKVSGELTTETREHNVPMIANQPAVVLFGPSLESQETGATLMPGDSVRVVQRYTSAPGVEKRDGQAFVKLKKTGGWVPI 1392
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: A0A6H5JKN0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN0_9PHAE) HSP 1 Score: 186 bits (472), Expect = 4.320e-50 Identity = 112/269 (41.64%), Postives = 151/269 (56.13%), Query Frame = 1
Query: 43 KRGDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSFPGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGVH-DDYMGEGRRGRFFYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSEGSTFLRLANDRGWTYARS--PTDGGVLFEDLAGGVSEDTEEYSFPSGASGMVPILYGPGLRTQATGATIRPGEHARAAERFTPVDNTKV----VFVKLADERGWIPV 828
K G L + +W YF L DN S S G ++ E++ S +T N N F VR+G W LLARS ++MK WM AI + LF RE+ V DDY +G G+ FY+MV G PQWI T P+ +AP TG+GLF GE IEVTQVL +EG +FLR+ANDRGW A+ DG LF ++G ++ +T E+ P A+ +L+GP L +Q GAT+ PG+ R +R+TP + FVKL GW+P+
Sbjct: 504 KEGYLMSQSKMMKRWTPRYFVL-DNGFL-SHYENISLVGTKKHKTMELKADS--VTRPANQINTFGVRTGTTEWLLLARSKNEMKAWMGAIKDQIHALFIREYNVPGDDYQSQGAWGQCFYKMVAGVRPQWIRTFPVPQAPHTGDGLFEGETIEVTQVLENEGVSFLRMANDRGWASAQDIEAGDGTALFTKVSGELTTETREHIVPMIANQPAVVLFGPSLESQEMGATLMPGDIVRVVQRYTPAPGVEKRDGQTFVKLKKTGGWVPI 768
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI) HSP 1 Score: 166 bits (419), Expect = 1.730e-42 Identity = 88/187 (47.06%), Postives = 116/187 (62.03%), Query Frame = 1
Query: 49 GDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSFPGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGV-HDDYMGEGRRGRFFYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSE--GSTFLRLANDRGWTYARSPTDGGVL 600
G L K + + +W +FRL D LT + S G T ++EM LT ++ S+ TKNCFCVR+ + +WFL+AR L M WM AIN LF + + V D+Y +G +GRFFYRM G+ PQWILT+P APRTG+GLF G+VI+V QVL+ + G FLR+A+DRGW R P D VL
Sbjct: 1161 GYLMKQSKHSSRWKSQFFRLDDGFLTCYD--KKSLVG--TTPNKEMELTGHSTASFATTKNCFCVRTEDAAWFLMARDLGSMNEWMTAINAEIHRLFVKLYDVPEDNYWSQGLQGRFFYRMAAGARPQWILTYPEQAAPRTGDGLFEGDVIDVVQVLTHKETGKVFLRIADDRGWAQRRDPVDNTVL 1343
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: A0A836C8E2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E2_9STRA) HSP 1 Score: 160 bits (406), Expect = 9.600e-41 Identity = 98/269 (36.43%), Postives = 137/269 (50.93%), Query Frame = 1
Query: 190 LTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGV--------------------HDDYM-GEGRRGRF-FYRMVEGSVPQWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSE-GSTFLRLANDRGWTYARSPTD------------------GG-----------VLFEDLAGGVSEDTEEYSFPSGASGMVPILYGPGLRTQATGATIRPGEHARAAERFTPVDNTKVVFVKLADERGWIPVRTDV 840
+TS ++TS TN K+CFCV++G+ WFLLA+ + +WM A+N L+ + D+Y EG F+R +E S PQW+ P APRTG+G+ PGEV+EV Q + G+ FLRLA++RGW RSP D GG LFE L G + D + Y F VPI GPGL+++ TG ++ PG +AA RF P D + ++F+KLAD RGW+PVR ++
Sbjct: 1426 ITSTSVTSATNLKDCFCVKTGDELWFLLAKDDAEKDKWMTAVNALIYALYVQRIAXXXXXXXXXXXXXXXXSYRPPQDNYWEAEGATNMHGFFRAIEASTPQWVRAFPELDAPRTGDGVVPGEVVEVEQAIEKRSGAVFLRLADERGWVLLRSPHDMFXXXXXXXXXXXXXXXXGGCVXXXXXXRSTALFEQLRGDATVDNKLYGFLDPKMQPVPIYAGPGLKSKPTGDSLTPGCKVQAAMRFLPYDLSGMMFIKLADGRGWVPVRRNL 1694
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Match: A0A6S8A7R9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8A7R9_9STRA) HSP 1 Score: 100 bits (248), Expect = 7.930e-20 Identity = 89/307 (28.99%), Postives = 140/307 (45.60%), Query Frame = 1
Query: 16 VMSLNSSEDKRGDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSF-------PGNSATESEEMRLTSYTITSYTNTKNCFCVRSGNMSWFLLARSLDDMKRWMAAINLRARHLFQREHGVHDDYMGE-------GRRGR-----FFYRMVEGSVP-QWILTHPMSKAPRTGEGLFPGEVIEVTQVLSSEGSTFLRLANDRGWTYARSPTDGGVLFEDLAGGVSEDTEEYSFPSGASGM-------VPILYGPGLRTQATGATIRPGEHARAAERFTPVDNTK--------VVFVKLADERGWIPVR 831
M+ +++ + G L K + +W +F L D+ L ++ ++ G S E + MRL + +ITS+T+T+NCFCV +G++SWFL+A + +M W++ IN H+ + + + G G G F Y + + + TH AP TG+ L PG+V+E+T+ L +GST++RLA D GW P F L GG + E A VP+L GP QA G + GE ++T + F KL+D RGW P++
Sbjct: 1207 AMAELATQRREGYLMKQGKWTSRWKPRWFVLEDSYLEYFEKKQHAYGRGGDKKQGKSKAE-KLMRLEAKSITSFTDTENCFCVSTGSVSWFLVAPNEREMAEWISHINA---HILSLRNDISNTDTGTDIARASFGSGGSSSSDFFEYARIAPDLDFVQVRTHASPGAPLTGQRLRPGDVVEITRKLELQGSTYVRLA-DFGWAPWLDPDASRPCFIPLEGGNASVPESLDPGKPAKFRLFKGTLPVPLLRGPTHYGQAHGESAIQGEIFEFIAQYTHAATPEPGFERDAYATFFKLSDGRGWAPLK 1508 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12451.2082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12451.2082.1 >prot_H-canaliculatus_F_contig12451.2082.1 ID=prot_H-canaliculatus_F_contig12451.2082.1|Name=mRNA_H-canaliculatus_F_contig12451.2082.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=285bp MSLNSSEDKRGDLAKNRRRAPKWAQYYFRLRDNSLTKSPPRRSSFPGNSAback to top mRNA from alignment at H-canaliculatus_F_contig12451:100..3424- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12451.2082.1 ID=mRNA_H-canaliculatus_F_contig12451.2082.1|Name=mRNA_H-canaliculatus_F_contig12451.2082.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3325bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12451:100..3424- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12451:100..3424- >mRNA_H-canaliculatus_F_contig12451.2082.1 ID=mRNA_H-canaliculatus_F_contig12451.2082.1|Name=mRNA_H-canaliculatus_F_contig12451.2082.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1710bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12451:100..3424- (Hapterophycus canaliculatus Oshoro5f female)back to top |